RNA–Protein interactions for RNA: ENST00000424937.1

PTCHD3P2-201, Transcript of patched domain containing 3 pseudogene 2, humanhuman

BASIC

Gene PTCHD3P2, Length 1,205 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P2-201ENST00000424937 TICAM2Q86XR7 235 aa26.68■■□□□ 1.86
PTCHD3P2-201ENST00000424937 PKN2Q16513 984 aaKnown RBP26.67■■□□□ 1.86
PTCHD3P2-201ENST00000424937 OTOP1Q7RTM1 612 aa26.67■■□□□ 1.86
PTCHD3P2-201ENST00000424937 ACER1Q8TDN7 264 aa26.67■■□□□ 1.86
PTCHD3P2-201ENST00000424937 SDSP20132 328 aa26.66■■□□□ 1.86
PTCHD3P2-201ENST00000424937 CAP1Q01518 475 aa26.66■■□□□ 1.86
PTCHD3P2-201ENST00000424937 MCMDC2Q4G0Z9 681 aa26.66■■□□□ 1.86
PTCHD3P2-201ENST00000424937 USP17L2Q6R6M4 530 aa26.66■■□□□ 1.86
PTCHD3P2-201ENST00000424937 CCDC17Q96LX7 622 aa26.66■■□□□ 1.86
PTCHD3P2-201ENST00000424937 EFCC1Q9HA90 598 aa26.66■■□□□ 1.86
PTCHD3P2-201ENST00000424937 EMILIN3Q9NT22 766 aa26.66■■□□□ 1.86
PTCHD3P2-201ENST00000424937 MYH4Q9Y623 1939 aa26.66■■□□□ 1.86
PTCHD3P2-201ENST00000424937 FOXP2O15409 715 aa26.65■■□□□ 1.86
PTCHD3P2-201ENST00000424937 ECM2O94769 699 aaPredicted RBP26.65■■□□□ 1.86
PTCHD3P2-201ENST00000424937 LACTBP83111 547 aaPredicted RBP26.65■■□□□ 1.86
PTCHD3P2-201ENST00000424937 KIF22Q14807 665 aa26.65■■□□□ 1.86
PTCHD3P2-201ENST00000424937 TTC22Q5TAA0 569 aa26.65■■□□□ 1.86
PTCHD3P2-201ENST00000424937 VPS53Q5VIR6 699 aa26.65■■□□□ 1.86
PTCHD3P2-201ENST00000424937 CLEC10AQ8IUN9 316 aa26.65■■□□□ 1.86
PTCHD3P2-201ENST00000424937 OSBPP22059 807 aa26.64■■□□□ 1.86
PTCHD3P2-201ENST00000424937 IRX3P78415 501 aaPredicted RBP26.64■■□□□ 1.86
PTCHD3P2-201ENST00000424937 ARHGAP39Q9C0H5 1083 aa26.64■■□□□ 1.86
PTCHD3P2-201ENST00000424937 KIAA1683Q9H0B3 1180 aa26.64■■□□□ 1.86
PTCHD3P2-201ENST00000424937 ASCC2Q9H1I8 757 aaPredicted RBP26.64■■□□□ 1.86
PTCHD3P2-201ENST00000424937 MKNK2Q9HBH9 465 aa26.64■■□□□ 1.86
PTCHD3P2-201ENST00000424937 DIAPH3Q9NSV4 1193 aa26.64■■□□□ 1.86
PTCHD3P2-201ENST00000424937 BCRP11274 1271 aa26.63■■□□□ 1.85
PTCHD3P2-201ENST00000424937 GSPT1P15170 499 aaKnown RBP26.63■■□□□ 1.85
PTCHD3P2-201ENST00000424937 USP14P54578 494 aa26.63■■□□□ 1.85
PTCHD3P2-201ENST00000424937 ICA1Q05084 483 aa26.63■■□□□ 1.85
PTCHD3P2-201ENST00000424937 FBXO46Q6PJ61 603 aaPredicted RBP26.63■■□□□ 1.85
PTCHD3P2-201ENST00000424937 ZNF589Q86UQ0 364 aaPredicted RBP26.63■■□□□ 1.85
PTCHD3P2-201ENST00000424937 C12orf42Q96LP6 360 aa26.63■■□□□ 1.85
PTCHD3P2-201ENST00000424937 CCDC171Q6TFL3 1326 aa26.63■■□□□ 1.85
PTCHD3P2-201ENST00000424937 LAMA4Q16363 1823 aa26.62■■□□□ 1.85
PTCHD3P2-201ENST00000424937 ARHGEF6Q15052 776 aa26.62■■□□□ 1.85
PTCHD3P2-201ENST00000424937 RASA1P20936 1047 aa26.61■■□□□ 1.85
PTCHD3P2-201ENST00000424937 PPARAQ07869 468 aa26.61■■□□□ 1.85
PTCHD3P2-201ENST00000424937 ARHGEF10LQ9HCE6 1279 aa26.61■■□□□ 1.85
PTCHD3P2-201ENST00000424937 HPS5Q9UPZ3 1129 aa26.61■■□□□ 1.85
PTCHD3P2-201ENST00000424937 A0A1W2PRG0 241 aa26.6■■□□□ 1.85
PTCHD3P2-201ENST00000424937 HIP1O00291 1037 aa26.6■■□□□ 1.85
PTCHD3P2-201ENST00000424937 PRDM1O75626 825 aa26.6■■□□□ 1.85
PTCHD3P2-201ENST00000424937 VCAM1P19320 739 aa26.6■■□□□ 1.85
PTCHD3P2-201ENST00000424937 HOXA7P31268 230 aaPredicted RBP26.6■■□□□ 1.85
PTCHD3P2-201ENST00000424937 CWC27Q6UX04 472 aaKnown RBP26.6■■□□□ 1.85
PTCHD3P2-201ENST00000424937 CENPQQ7L2Z9 268 aaPredicted RBP26.6■■□□□ 1.85
PTCHD3P2-201ENST00000424937 ANKRD13CQ8N6S4 541 aa26.6■■□□□ 1.85
PTCHD3P2-201ENST00000424937 ZNF287Q9HBT7 754 aa26.6■■□□□ 1.85
PTCHD3P2-201ENST00000424937 PARP14Q460N5 1801 aa26.6■■□□□ 1.85
PTCHD3P2-201ENST00000424937 DOCK3Q8IZD9 2030 aa26.6■■□□□ 1.85
PTCHD3P2-201ENST00000424937 CCDC85CA6NKD9 419 aa26.59■■□□□ 1.85
PTCHD3P2-201ENST00000424937 NEFLP07196 543 aa26.59■■□□□ 1.85
PTCHD3P2-201ENST00000424937 SLC3A2P08195 630 aaKnown RBP26.59■■□□□ 1.85
PTCHD3P2-201ENST00000424937 CTGFP29279 349 aa26.59■■□□□ 1.85
PTCHD3P2-201ENST00000424937 MFAP1P55081 439 aaKnown RBP26.59■■□□□ 1.85
PTCHD3P2-201ENST00000424937 HSPD1P10809 573 aaKnown RBP26.58■■□□□ 1.85
PTCHD3P2-201ENST00000424937 PSMC4P43686 418 aa26.58■■□□□ 1.85
PTCHD3P2-201ENST00000424937 GCLCP48506 637 aaPredicted RBP26.58■■□□□ 1.85
PTCHD3P2-201ENST00000424937 ATP2B2Q01814 1243 aa26.58■■□□□ 1.85
PTCHD3P2-201ENST00000424937 SH2D4AQ9H788 454 aa26.58■■□□□ 1.85
PTCHD3P2-201ENST00000424937 PTPN22Q9Y2R2 807 aa26.58■■□□□ 1.85
PTCHD3P2-201ENST00000424937 FMNL1O95466 1100 aaPredicted RBP26.57■■□□□ 1.84
PTCHD3P2-201ENST00000424937 CTDSPL2Q05D32 466 aa26.57■■□□□ 1.84
PTCHD3P2-201ENST00000424937 PDE4BQ07343 736 aa26.57■■□□□ 1.84
PTCHD3P2-201ENST00000424937 FAM110CQ1W6H9 321 aa26.57■■□□□ 1.84
PTCHD3P2-201ENST00000424937 TRIM47Q96LD4 638 aa26.57■■□□□ 1.84
PTCHD3P2-201ENST00000424937 KANSL2Q9H9L4 492 aa26.57■■□□□ 1.84
PTCHD3P2-201ENST00000424937 USP17L15C9J2P7 530 aa26.56■■□□□ 1.84
PTCHD3P2-201ENST00000424937 USP17L13C9JLJ4 530 aa26.56■■□□□ 1.84
PTCHD3P2-201ENST00000424937 USP17L11C9JVI0 530 aa26.56■■□□□ 1.84
PTCHD3P2-201ENST00000424937 USP17L18D6R9N7 530 aa26.56■■□□□ 1.84
PTCHD3P2-201ENST00000424937 USP17L22D6RA61 530 aa26.56■■□□□ 1.84
PTCHD3P2-201ENST00000424937 USP17L17D6RBQ6 530 aa26.56■■□□□ 1.84
PTCHD3P2-201ENST00000424937 USP17L19D6RCP7 530 aa26.56■■□□□ 1.84
PTCHD3P2-201ENST00000424937 USP17L20D6RJB6 530 aa26.56■■□□□ 1.84
PTCHD3P2-201ENST00000424937 EEF2P13639 858 aaKnown RBP26.56■■□□□ 1.84
PTCHD3P2-201ENST00000424937 HERVK_113P62684 666 aa26.56■■□□□ 1.84
PTCHD3P2-201ENST00000424937 USP17L24Q0WX57 530 aa26.56■■□□□ 1.84
PTCHD3P2-201ENST00000424937 ALX1Q15699 326 aa26.56■■□□□ 1.84
PTCHD3P2-201ENST00000424937 SIAH1Q8IUQ4 282 aa26.56■■□□□ 1.84
PTCHD3P2-201ENST00000424937 ZNF444Q8N0Y2 327 aaPredicted RBP26.56■■□□□ 1.84
PTCHD3P2-201ENST00000424937 P2RX7Q99572 595 aaKnown RBP26.56■■□□□ 1.84
PTCHD3P2-201ENST00000424937 GNL3Q9BVP2 549 aaKnown RBP eCLIP26.56■■□□□ 1.84
PTCHD3P2-201ENST00000424937 RPAP3Q9H6T3 665 aaPredicted RBP26.56■■□□□ 1.84
PTCHD3P2-201ENST00000424937 RLFQ13129 1914 aa26.56■■□□□ 1.84
PTCHD3P2-201ENST00000424937 FCGRTP55899 365 aa26.55■■□□□ 1.84
PTCHD3P2-201ENST00000424937 TMX2Q9Y320 296 aa26.55■■□□□ 1.84
PTCHD3P2-201ENST00000424937 ZMYM6O95789 1325 aa26.55■■□□□ 1.84
PTCHD3P2-201ENST00000424937 HTTP42858 3142 aa26.55■■□□□ 1.84
PTCHD3P2-201ENST00000424937 GNRH1P01148 92 aa26.54■■□□□ 1.84
PTCHD3P2-201ENST00000424937 FGAP02671 866 aa26.54■■□□□ 1.84
PTCHD3P2-201ENST00000424937 PTCH2Q9Y6C5 1203 aa26.54■■□□□ 1.84
PTCHD3P2-201ENST00000424937 KIAA1755Q5JYT7 1200 aa26.53■■□□□ 1.84
PTCHD3P2-201ENST00000424937 CATSPERGQ6ZRH7 1159 aa26.53■■□□□ 1.84
PTCHD3P2-201ENST00000424937 SPICE1Q8N0Z3 855 aa26.53■■□□□ 1.84
PTCHD3P2-201ENST00000424937 CCDC136Q96JN2 1154 aa26.53■■□□□ 1.84
PTCHD3P2-201ENST00000424937 TANGO6Q9C0B7 1094 aa26.53■■□□□ 1.84
PTCHD3P2-201ENST00000424937 VCPKMTQ9H867 229 aa26.53■■□□□ 1.84
PTCHD3P2-201ENST00000424937 ANAPC4Q9UJX5 808 aa26.53■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms