RNA–Protein interactions for RNA: ENST00000422242.1

RAB5A-203, Transcript of RAB5A, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB5A, Length 1,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5A-203ENST00000422242 ZNF408Q9H9D4 720 aa13.73□□□□□ -0.21
RAB5A-203ENST00000422242 SLC52A2Q9HAB3 445 aa13.73□□□□□ -0.21
RAB5A-203ENST00000422242 GINM1Q9NU53 330 aa13.73□□□□□ -0.21
RAB5A-203ENST00000422242 FANCIQ9NVI1 1328 aa13.73□□□□□ -0.21
RAB5A-203ENST00000422242 DCDC2BA2VCK2 349 aa13.73□□□□□ -0.21
RAB5A-203ENST00000422242 EFSO43281 561 aa13.73□□□□□ -0.21
RAB5A-203ENST00000422242 FAM157BP0CG42 384 aa13.73□□□□□ -0.21
RAB5A-203ENST00000422242 RXRBP28702 533 aa13.73□□□□□ -0.21
RAB5A-203ENST00000422242 ZNF746Q6NUN9 644 aaPredicted RBP13.73□□□□□ -0.21
RAB5A-203ENST00000422242 MARCH10Q8NA82 808 aaPredicted RBP13.73□□□□□ -0.21
RAB5A-203ENST00000422242 CNTNAP3BQ96NU0 1288 aa13.73□□□□□ -0.21
RAB5A-203ENST00000422242 OSMRQ99650 979 aa13.73□□□□□ -0.21
RAB5A-203ENST00000422242 CNTNAP3Q9BZ76 1288 aa13.73□□□□□ -0.21
RAB5A-203ENST00000422242 DNMT3LQ9UJW3 386 aa13.73□□□□□ -0.21
RAB5A-203ENST00000422242 CACNA1FO60840 1977 aa13.72□□□□□ -0.21
RAB5A-203ENST00000422242 KHNYNO15037 678 aaKnown RBP13.72□□□□□ -0.21
RAB5A-203ENST00000422242 RLBP1P12271 317 aa13.72□□□□□ -0.21
RAB5A-203ENST00000422242 FAM160A1Q05DH4 1040 aa13.72□□□□□ -0.21
RAB5A-203ENST00000422242 NFX1Q12986 1120 aaKnown RBP13.72□□□□□ -0.21
RAB5A-203ENST00000422242 FBXL19Q6PCT2 694 aa13.72□□□□□ -0.21
RAB5A-203ENST00000422242 TRIM46Q7Z4K8 759 aa13.72□□□□□ -0.21
RAB5A-203ENST00000422242 CCNJLQ8IV13 435 aa13.72□□□□□ -0.21
RAB5A-203ENST00000422242 PNMA5Q96PV4 448 aa13.72□□□□□ -0.21
RAB5A-203ENST00000422242 TLR6Q9Y2C9 796 aa13.72□□□□□ -0.21
RAB5A-203ENST00000422242 TRPA1O75762 1119 aa13.71□□□□□ -0.22
RAB5A-203ENST00000422242 CT47B1P0C2W7 299 aaPredicted RBP13.71□□□□□ -0.22
RAB5A-203ENST00000422242 NFKB1P19838 968 aa13.71□□□□□ -0.22
RAB5A-203ENST00000422242 MMRN1Q13201 1228 aa13.71□□□□□ -0.22
RAB5A-203ENST00000422242 GRIN2CQ14957 1233 aa13.71□□□□□ -0.22
RAB5A-203ENST00000422242 NLGN1Q8N2Q7 840 aa13.71□□□□□ -0.22
RAB5A-203ENST00000422242 PHC3Q8NDX5 983 aa13.71□□□□□ -0.22
RAB5A-203ENST00000422242 RHOVQ96L33 236 aa13.71□□□□□ -0.22
RAB5A-203ENST00000422242 MBIPQ9NS73 344 aa13.71□□□□□ -0.22
RAB5A-203ENST00000422242 MRVI1Q9Y6F6 885 aa13.71□□□□□ -0.22
RAB5A-203ENST00000422242 PSAPP07602 524 aa13.7□□□□□ -0.22
RAB5A-203ENST00000422242 CELA3AP09093 270 aa13.7□□□□□ -0.22
RAB5A-203ENST00000422242 CABP4P57796 275 aa13.7□□□□□ -0.22
RAB5A-203ENST00000422242 FIGNL1Q6PIW4 674 aa13.7□□□□□ -0.22
RAB5A-203ENST00000422242 TSPYL4Q9UJ04 414 aa13.7□□□□□ -0.22
RAB5A-203ENST00000422242 LAS1LQ9Y4W2 734 aaKnown RBP13.7□□□□□ -0.22
RAB5A-203ENST00000422242 PCDHGC4Q9Y5F7 938 aa13.7□□□□□ -0.22
RAB5A-203ENST00000422242 SOS1Q07889 1333 aaPredicted RBP13.7□□□□□ -0.22
RAB5A-203ENST00000422242 LAMB4A4D0S4 1761 aa13.69□□□□□ -0.22
RAB5A-203ENST00000422242 BTBD11A6QL63 1104 aa13.69□□□□□ -0.22
RAB5A-203ENST00000422242 THBS1P07996 1170 aa13.69□□□□□ -0.22
RAB5A-203ENST00000422242 LIG3P49916 1009 aa13.69□□□□□ -0.22
RAB5A-203ENST00000422242 ZNF831Q5JPB2 1677 aa13.69□□□□□ -0.22
RAB5A-203ENST00000422242 RIPOR1Q6ZS17 1223 aa13.69□□□□□ -0.22
RAB5A-203ENST00000422242 TSR2Q969E8 191 aaKnown RBP13.69□□□□□ -0.22
RAB5A-203ENST00000422242 ZFP42Q96MM3 310 aa13.69□□□□□ -0.22
RAB5A-203ENST00000422242 NT5C1AQ9BXI3 368 aa13.69□□□□□ -0.22
RAB5A-203ENST00000422242 TLR7Q9NYK1 1049 aaKnown RBP13.69□□□□□ -0.22
RAB5A-203ENST00000422242 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.69□□□□□ -0.22
RAB5A-203ENST00000422242 BTAF1O14981 1849 aa13.68□□□□□ -0.22
RAB5A-203ENST00000422242 CICQ96RK0 1608 aaPredicted RBP13.68□□□□□ -0.22
RAB5A-203ENST00000422242 RGS12O14924 1447 aa13.68□□□□□ -0.22
RAB5A-203ENST00000422242 K7ELQ4 463 aaPredicted RBP13.68□□□□□ -0.22
RAB5A-203ENST00000422242 KIF4AO95239 1232 aa13.68□□□□□ -0.22
RAB5A-203ENST00000422242 ETFBP38117 255 aa13.68□□□□□ -0.22
RAB5A-203ENST00000422242 GRIA4P48058 902 aa13.68□□□□□ -0.22
RAB5A-203ENST00000422242 HYAL2Q12891 473 aa13.68□□□□□ -0.22
RAB5A-203ENST00000422242 LBRQ14739 615 aaKnown RBP13.68□□□□□ -0.22
RAB5A-203ENST00000422242 JAZF1Q86VZ6 243 aa13.68□□□□□ -0.22
RAB5A-203ENST00000422242 KCNQ5Q9NR82 932 aa13.68□□□□□ -0.22
RAB5A-203ENST00000422242 TMOD3Q9NYL9 352 aa13.68□□□□□ -0.22
RAB5A-203ENST00000422242 METTL12A8MUP2 240 aa13.67□□□□□ -0.22
RAB5A-203ENST00000422242 PF4P02776 101 aa13.67□□□□□ -0.22
RAB5A-203ENST00000422242 TNP2Q05952 138 aa13.67□□□□□ -0.22
RAB5A-203ENST00000422242 KRT27Q7Z3Y8 459 aa13.67□□□□□ -0.22
RAB5A-203ENST00000422242 MRFAP1L1Q96HT8 127 aa13.67□□□□□ -0.22
RAB5A-203ENST00000422242 UBP1Q9NZI7 540 aa13.67□□□□□ -0.22
RAB5A-203ENST00000422242 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.67□□□□□ -0.22
RAB5A-203ENST00000422242 SUPT16HQ9Y5B9 1047 aaKnown RBP13.67□□□□□ -0.22
RAB5A-203ENST00000422242 HEG1Q9ULI3 1381 aa13.66□□□□□ -0.22
RAB5A-203ENST00000422242 FAM187AA6NFU0 413 aa13.66□□□□□ -0.22
RAB5A-203ENST00000422242 MAPTP10636 758 aaKnown RBP13.66□□□□□ -0.22
RAB5A-203ENST00000422242 GARTP22102 1010 aa13.66□□□□□ -0.22
RAB5A-203ENST00000422242 SOX18P35713 384 aa13.66□□□□□ -0.22
RAB5A-203ENST00000422242 SOX9P48436 509 aa13.66□□□□□ -0.22
RAB5A-203ENST00000422242 SERINC3Q13530 473 aa13.66□□□□□ -0.22
RAB5A-203ENST00000422242 SPRED3Q2MJR0 410 aa13.66□□□□□ -0.22
RAB5A-203ENST00000422242 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.66□□□□□ -0.22
RAB5A-203ENST00000422242 ZNF790Q6PG37 636 aa13.66□□□□□ -0.22
RAB5A-203ENST00000422242 NSUN5Q96P11 429 aaKnown RBP13.66□□□□□ -0.22
RAB5A-203ENST00000422242 CEP44Q9C0F1 390 aa13.66□□□□□ -0.22
RAB5A-203ENST00000422242 KCPQ6ZWJ8 1503 aa13.66□□□□□ -0.22
RAB5A-203ENST00000422242 C5P01031 1676 aa13.66□□□□□ -0.22
RAB5A-203ENST00000422242 HOXB7P09629 217 aa13.65□□□□□ -0.22
RAB5A-203ENST00000422242 EXOSC9Q06265 439 aaKnown RBP13.65□□□□□ -0.22
RAB5A-203ENST00000422242 SNAP47Q5SQN1 464 aa13.65□□□□□ -0.22
RAB5A-203ENST00000422242 EGFLAMQ63HQ2 1017 aa13.65□□□□□ -0.22
RAB5A-203ENST00000422242 ANKS3Q6ZW76 656 aa13.65□□□□□ -0.22
RAB5A-203ENST00000422242 ANKRD13AQ8IZ07 590 aa13.65□□□□□ -0.22
RAB5A-203ENST00000422242 CEP120Q8N960 986 aa13.65□□□□□ -0.22
RAB5A-203ENST00000422242 HHIPQ96QV1 700 aa13.65□□□□□ -0.22
RAB5A-203ENST00000422242 ZFYVE1Q9HBF4 777 aa13.65□□□□□ -0.22
RAB5A-203ENST00000422242 DZANK1Q9NVP4 752 aa13.65□□□□□ -0.22
RAB5A-203ENST00000422242 MIS18AQ9NYP9 233 aa13.65□□□□□ -0.22
RAB5A-203ENST00000422242 GREM1O60565 184 aa13.64□□□□□ -0.23
RAB5A-203ENST00000422242 EIF4A1P60842 406 aaKnown RBP13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms