RNA–Protein interactions for RNA: ENST00000420665.5

LRRFIP1-205, Transcript of LRR binding FLII interacting protein 1, human

TSL 3

Gene LRRFIP1, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LRRFIP1-205	ENST00000420665	ERO1A	Q96HE7	468 aa		28.7	■■■□□ 2.18
LRRFIP1-205	ENST00000420665	MCOLN1	Q9GZU1	580 aa		28.7	■■■□□ 2.18
LRRFIP1-205	ENST00000420665	CPA4	Q9UI42	421 aa		28.7	■■■□□ 2.18
LRRFIP1-205	ENST00000420665	ZYX	Q15942	572 aa	Known RBP	28.69	■■■□□ 2.18
LRRFIP1-205	ENST00000420665	CWC27	Q6UX04	472 aa	Known RBP	28.69	■■■□□ 2.18
LRRFIP1-205	ENST00000420665	ACER1	Q8TDN7	264 aa		28.69	■■■□□ 2.18
LRRFIP1-205	ENST00000420665	PPARA	Q07869	468 aa		28.68	■■■□□ 2.18
LRRFIP1-205	ENST00000420665	PABPC4	Q13310	644 aa	Known RBP eCLIP	28.68	■■■□□ 2.18
LRRFIP1-205	ENST00000420665	USP17L2	Q6R6M4	530 aa		28.68	■■■□□ 2.18
LRRFIP1-205	ENST00000420665	C17orf99	Q6UX52	265 aa		28.68	■■■□□ 2.18
LRRFIP1-205	ENST00000420665	SMCR8	Q8TEV9	937 aa	Predicted RBP	28.68	■■■□□ 2.18
LRRFIP1-205	ENST00000420665	CCDC136	Q96JN2	1154 aa		28.68	■■■□□ 2.18
LRRFIP1-205	ENST00000420665	KIAA1683	Q9H0B3	1180 aa		28.68	■■■□□ 2.18
LRRFIP1-205	ENST00000420665	PNMA3	Q9UL41	463 aa		28.68	■■■□□ 2.18
LRRFIP1-205	ENST00000420665	CLEC10A	Q8IUN9	316 aa		28.67	■■■□□ 2.18
LRRFIP1-205	ENST00000420665	MKNK2	Q9HBH9	465 aa		28.67	■■■□□ 2.18
LRRFIP1-205	ENST00000420665	EMILIN3	Q9NT22	766 aa		28.67	■■■□□ 2.18
LRRFIP1-205	ENST00000420665	RASA1	P20936	1047 aa		28.66	■■■□□ 2.18
LRRFIP1-205	ENST00000420665	MFAP1	P55081	439 aa	Known RBP	28.66	■■■□□ 2.18
LRRFIP1-205	ENST00000420665	ICA1	Q05084	483 aa		28.66	■■■□□ 2.18
LRRFIP1-205	ENST00000420665	ZNF287	Q9HBT7	754 aa		28.66	■■■□□ 2.18
LRRFIP1-205	ENST00000420665	HSPD1	P10809	573 aa	Known RBP	28.65	■■■□□ 2.18
LRRFIP1-205	ENST00000420665	USP14	P54578	494 aa		28.65	■■■□□ 2.18
LRRFIP1-205	ENST00000420665	C12orf42	Q96LP6	360 aa		28.65	■■■□□ 2.18
LRRFIP1-205	ENST00000420665		A0A1W2PRG0	241 aa		28.64	■■■□□ 2.18
LRRFIP1-205	ENST00000420665	PRDM1	O75626	825 aa		28.64	■■■□□ 2.18
LRRFIP1-205	ENST00000420665	SLC3A2	P08195	630 aa	Known RBP	28.64	■■■□□ 2.18
LRRFIP1-205	ENST00000420665	CAP1	Q01518	475 aa		28.64	■■■□□ 2.18
LRRFIP1-205	ENST00000420665	ALX1	Q15699	326 aa		28.64	■■■□□ 2.18
LRRFIP1-205	ENST00000420665	ASCC2	Q9H1I8	757 aa	Predicted RBP	28.64	■■■□□ 2.18
LRRFIP1-205	ENST00000420665	TRIM17	Q9Y577	477 aa		28.64	■■■□□ 2.18
LRRFIP1-205	ENST00000420665	GREB1L	Q9C091	1923 aa	Predicted RBP	28.63	■■■□□ 2.17
LRRFIP1-205	ENST00000420665	BCR	P11274	1271 aa		28.63	■■■□□ 2.17
LRRFIP1-205	ENST00000420665	OSBP	P22059	807 aa		28.63	■■■□□ 2.17
LRRFIP1-205	ENST00000420665	IRX3	P78415	501 aa	Predicted RBP	28.63	■■■□□ 2.17
LRRFIP1-205	ENST00000420665	LACTB	P83111	547 aa	Predicted RBP	28.63	■■■□□ 2.17
LRRFIP1-205	ENST00000420665	PDE4B	Q07343	736 aa		28.63	■■■□□ 2.17
LRRFIP1-205	ENST00000420665	OTOP1	Q7RTM1	612 aa		28.63	■■■□□ 2.17
LRRFIP1-205	ENST00000420665	SKAP1	Q86WV1	359 aa		28.63	■■■□□ 2.17
LRRFIP1-205	ENST00000420665	ARHGEF10L	Q9HCE6	1279 aa		28.63	■■■□□ 2.17
LRRFIP1-205	ENST00000420665	ZMYM6	O95789	1325 aa		28.63	■■■□□ 2.17
LRRFIP1-205	ENST00000420665	FGA	P02671	866 aa		28.62	■■■□□ 2.17
LRRFIP1-205	ENST00000420665	HOXA7	P31268	230 aa	Predicted RBP	28.62	■■■□□ 2.17
LRRFIP1-205	ENST00000420665	ABHD8	Q96I13	439 aa		28.62	■■■□□ 2.17
LRRFIP1-205	ENST00000420665	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	28.62	■■■□□ 2.17
LRRFIP1-205	ENST00000420665	KANSL2	Q9H9L4	492 aa		28.62	■■■□□ 2.17
LRRFIP1-205	ENST00000420665	ZSWIM8	A7E2V4	1837 aa		28.62	■■■□□ 2.17
LRRFIP1-205	ENST00000420665	VCAM1	P19320	739 aa		28.61	■■■□□ 2.17
LRRFIP1-205	ENST00000420665	CTDSPL2	Q05D32	466 aa		28.61	■■■□□ 2.17
LRRFIP1-205	ENST00000420665	KIF22	Q14807	665 aa		28.61	■■■□□ 2.17
LRRFIP1-205	ENST00000420665	PKN2	Q16513	984 aa	Known RBP	28.61	■■■□□ 2.17
LRRFIP1-205	ENST00000420665	SIAH1	Q8IUQ4	282 aa		28.61	■■■□□ 2.17
LRRFIP1-205	ENST00000420665	ARHGAP39	Q9C0H5	1083 aa		28.61	■■■□□ 2.17
LRRFIP1-205	ENST00000420665	EFCC1	Q9HA90	598 aa		28.61	■■■□□ 2.17
LRRFIP1-205	ENST00000420665	ZNF444	Q8N0Y2	327 aa	Predicted RBP	28.6	■■■□□ 2.17
LRRFIP1-205	ENST00000420665	SH2D4A	Q9H788	454 aa		28.6	■■■□□ 2.17
LRRFIP1-205	ENST00000420665	ANAPC4	Q9UJX5	808 aa		28.6	■■■□□ 2.17
LRRFIP1-205	ENST00000420665	ECM2	O94769	699 aa	Predicted RBP	28.59	■■■□□ 2.17
LRRFIP1-205	ENST00000420665	EEF2	P13639	858 aa	Known RBP	28.59	■■■□□ 2.17
LRRFIP1-205	ENST00000420665	ATP2B2	Q01814	1243 aa		28.59	■■■□□ 2.17
LRRFIP1-205	ENST00000420665	TMX2	Q9Y320	296 aa		28.59	■■■□□ 2.17
LRRFIP1-205	ENST00000420665	GCLC	P48506	637 aa	Predicted RBP	28.58	■■■□□ 2.17
LRRFIP1-205	ENST00000420665	ARHGEF6	Q15052	776 aa		28.58	■■■□□ 2.17
LRRFIP1-205	ENST00000420665	ANKRD13C	Q8N6S4	541 aa		28.58	■■■□□ 2.17
LRRFIP1-205	ENST00000420665	IL25	Q9H293	177 aa		28.58	■■■□□ 2.17
LRRFIP1-205	ENST00000420665	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	28.58	■■■□□ 2.17
LRRFIP1-205	ENST00000420665	CHML	P26374	656 aa		28.57	■■■□□ 2.16
LRRFIP1-205	ENST00000420665	HERVK_113	P62684	666 aa		28.57	■■■□□ 2.16
LRRFIP1-205	ENST00000420665	FBXO46	Q6PJ61	603 aa	Predicted RBP	28.57	■■■□□ 2.16
LRRFIP1-205	ENST00000420665	RPAP3	Q9H6T3	665 aa	Predicted RBP	28.57	■■■□□ 2.16
LRRFIP1-205	ENST00000420665	RAD50	Q92878	1312 aa		28.57	■■■□□ 2.16
LRRFIP1-205	ENST00000420665	PLIN4	Q96Q06	1357 aa		28.57	■■■□□ 2.16
LRRFIP1-205	ENST00000420665	USP17L15	C9J2P7	530 aa		28.56	■■■□□ 2.16
LRRFIP1-205	ENST00000420665	USP17L13	C9JLJ4	530 aa		28.56	■■■□□ 2.16
LRRFIP1-205	ENST00000420665	USP17L11	C9JVI0	530 aa		28.56	■■■□□ 2.16
LRRFIP1-205	ENST00000420665	USP17L18	D6R9N7	530 aa		28.56	■■■□□ 2.16
LRRFIP1-205	ENST00000420665	USP17L22	D6RA61	530 aa		28.56	■■■□□ 2.16
LRRFIP1-205	ENST00000420665	USP17L17	D6RBQ6	530 aa		28.56	■■■□□ 2.16
LRRFIP1-205	ENST00000420665	USP17L19	D6RCP7	530 aa		28.56	■■■□□ 2.16
LRRFIP1-205	ENST00000420665	USP17L20	D6RJB6	530 aa		28.56	■■■□□ 2.16
LRRFIP1-205	ENST00000420665	TSPY3	P0CV98	308 aa		28.56	■■■□□ 2.16
LRRFIP1-205	ENST00000420665	TSPY8	P0CW00	308 aa		28.56	■■■□□ 2.16
LRRFIP1-205	ENST00000420665	CTGF	P29279	349 aa		28.56	■■■□□ 2.16
LRRFIP1-205	ENST00000420665	USP17L24	Q0WX57	530 aa		28.56	■■■□□ 2.16
LRRFIP1-205	ENST00000420665	FAM110C	Q1W6H9	321 aa		28.56	■■■□□ 2.16
LRRFIP1-205	ENST00000420665	P2RX7	Q99572	595 aa	Known RBP	28.56	■■■□□ 2.16
LRRFIP1-205	ENST00000420665	VCPKMT	Q9H867	229 aa		28.56	■■■□□ 2.16
LRRFIP1-205	ENST00000420665	IGKV6D-41	A0A0C4DH26	115 aa		28.55	■■■□□ 2.16
LRRFIP1-205	ENST00000420665	PSMC4	P43686	418 aa		28.55	■■■□□ 2.16
LRRFIP1-205	ENST00000420665	HAND2	P61296	217 aa		28.55	■■■□□ 2.16
LRRFIP1-205	ENST00000420665	FAM47A	Q5JRC9	791 aa		28.55	■■■□□ 2.16
LRRFIP1-205	ENST00000420665	KIAA1755	Q5JYT7	1200 aa		28.55	■■■□□ 2.16
LRRFIP1-205	ENST00000420665	IFFO2	Q5TF58	517 aa		28.55	■■■□□ 2.16
LRRFIP1-205	ENST00000420665	LPAR1	Q92633	364 aa		28.55	■■■□□ 2.16
LRRFIP1-205	ENST00000420665	TRIM47	Q96LD4	638 aa		28.55	■■■□□ 2.16
LRRFIP1-205	ENST00000420665	DSCC1	Q9BVC3	393 aa		28.55	■■■□□ 2.16
LRRFIP1-205	ENST00000420665	INCENP	Q9NQS7	918 aa		28.55	■■■□□ 2.16
LRRFIP1-205	ENST00000420665	TACC3	Q9Y6A5	838 aa		28.55	■■■□□ 2.16
LRRFIP1-205	ENST00000420665	SPICE1	Q8N0Z3	855 aa		28.54	■■■□□ 2.16
LRRFIP1-205	ENST00000420665	RUFY2	Q8WXA3	655 aa		28.54	■■■□□ 2.16

Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms