RNA–Protein interactions for RNA: ENST00000419322.6

CCDC57-207, Transcript of coiled-coil domain containing 57, humanhuman

APPRIS ALT2 TSL 5

Gene CCDC57, Length 2,829 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-207ENST00000419322 VPS16Q9H269 839 aa17.12■□□□□ 0.33
CCDC57-207ENST00000419322 CTNND2Q9UQB3 1225 aa17.12■□□□□ 0.33
CCDC57-207ENST00000419322 C4AP0C0L4 1744 aa17.12■□□□□ 0.33
CCDC57-207ENST00000419322 C4BP0C0L5 1744 aa17.12■□□□□ 0.33
CCDC57-207ENST00000419322 TFRCP02786 760 aaKnown RBP17.11■□□□□ 0.33
CCDC57-207ENST00000419322 GNAT2P19087 354 aa17.11■□□□□ 0.33
CCDC57-207ENST00000419322 IFIT1BQ5T764 474 aaKnown RBP17.11■□□□□ 0.33
CCDC57-207ENST00000419322 TAF3Q5VWG9 929 aa17.11■□□□□ 0.33
CCDC57-207ENST00000419322 ZNF579Q8NAF0 562 aaKnown RBP17.11■□□□□ 0.33
CCDC57-207ENST00000419322 KIFC2Q96AC6 838 aa17.11■□□□□ 0.33
CCDC57-207ENST00000419322 BTG4Q9NY30 223 aa17.11■□□□□ 0.33
CCDC57-207ENST00000419322 COL5A2P05997 1499 aaPredicted RBP17.11■□□□□ 0.33
CCDC57-207ENST00000419322 A0A1B0GTH6 734 aa17.11■□□□□ 0.33
CCDC57-207ENST00000419322 TBC1D8O95759 1140 aa17.11■□□□□ 0.33
CCDC57-207ENST00000419322 ERCC5P28715 1186 aaPredicted RBP17.11■□□□□ 0.33
CCDC57-207ENST00000419322 ST5P78524 1137 aa17.11■□□□□ 0.33
CCDC57-207ENST00000419322 RGS22Q8NE09 1264 aa17.11■□□□□ 0.33
CCDC57-207ENST00000419322 ATRNO75882 1429 aa17.11■□□□□ 0.33
CCDC57-207ENST00000419322 CDC25AP30304 524 aa17.11■□□□□ 0.33
CCDC57-207ENST00000419322 GYG1P46976 350 aa17.11■□□□□ 0.33
CCDC57-207ENST00000419322 MCM6Q14566 821 aa17.11■□□□□ 0.33
CCDC57-207ENST00000419322 RRAGBQ5VZM2 374 aa17.11■□□□□ 0.33
CCDC57-207ENST00000419322 SHISA4Q96DD7 197 aa17.11■□□□□ 0.33
CCDC57-207ENST00000419322 TNS2Q63HR2 1409 aa17.1■□□□□ 0.33
CCDC57-207ENST00000419322 MAGEB6P1A0A0J9YX57 407 aa17.1■□□□□ 0.33
CCDC57-207ENST00000419322 N4BP3O15049 544 aa17.1■□□□□ 0.33
CCDC57-207ENST00000419322 CHMP4BP1P59074 171 aa17.1■□□□□ 0.33
CCDC57-207ENST00000419322 DYNLL1P63167 89 aaKnown RBP17.1■□□□□ 0.33
CCDC57-207ENST00000419322 CATIPQ7Z7H3 387 aa17.1■□□□□ 0.33
CCDC57-207ENST00000419322 ACRBPQ8NEB7 543 aa17.1■□□□□ 0.33
CCDC57-207ENST00000419322 ADGRG1Q9Y653 693 aa17.1■□□□□ 0.33
CCDC57-207ENST00000419322 MYO5AQ9Y4I1 1855 aaKnown RBP17.1■□□□□ 0.33
CCDC57-207ENST00000419322 RHOXF2BP0C7M4 288 aa17.09■□□□□ 0.33
CCDC57-207ENST00000419322 MCM7P33993 719 aa17.09■□□□□ 0.33
CCDC57-207ENST00000419322 PTGDRQ13258 359 aa17.09■□□□□ 0.33
CCDC57-207ENST00000419322 ENAHQ8N8S7 591 aaPredicted RBP17.09■□□□□ 0.33
CCDC57-207ENST00000419322 CDC5LQ99459 802 aaKnown RBP17.09■□□□□ 0.33
CCDC57-207ENST00000419322 NUP88Q99567 741 aaPredicted RBP17.09■□□□□ 0.33
CCDC57-207ENST00000419322 RHOXF2Q9BQY4 288 aa17.09■□□□□ 0.33
CCDC57-207ENST00000419322 BRMS1Q9HCU9 246 aa17.09■□□□□ 0.33
CCDC57-207ENST00000419322 ADAMTSL3P82987 1691 aa17.09■□□□□ 0.33
CCDC57-207ENST00000419322 ZNF142P52746 1687 aaPredicted RBP17.09■□□□□ 0.33
CCDC57-207ENST00000419322 CYP2C19P33261 490 aa17.09■□□□□ 0.33
CCDC57-207ENST00000419322 FXR1P51114 621 aaKnown RBP eCLIP17.09■□□□□ 0.33
CCDC57-207ENST00000419322 ELOA2Q8IYF1 753 aaPredicted RBP17.09■□□□□ 0.33
CCDC57-207ENST00000419322 RABGGTAQ92696 567 aa17.09■□□□□ 0.33
CCDC57-207ENST00000419322 SLAIN2Q9P270 581 aa17.09■□□□□ 0.33
CCDC57-207ENST00000419322 MTMR7Q9Y216 660 aa17.09■□□□□ 0.33
CCDC57-207ENST00000419322 AKAP11Q9UKA4 1901 aa17.09■□□□□ 0.33
CCDC57-207ENST00000419322 ABL1P00519 1130 aa17.08■□□□□ 0.33
CCDC57-207ENST00000419322 HNRNPH2P55795 449 aaKnown RBP17.08■□□□□ 0.33
CCDC57-207ENST00000419322 CHRNDQ07001 517 aa17.08■□□□□ 0.33
CCDC57-207ENST00000419322 ZSCAN10Q96SZ4 725 aaPredicted RBP17.08■□□□□ 0.33
CCDC57-207ENST00000419322 RNF26Q9BY78 433 aaPredicted RBP17.08■□□□□ 0.33
CCDC57-207ENST00000419322 AATFQ9NY61 560 aaKnown RBP eCLIP17.08■□□□□ 0.331e-6■■■■■ 39
CCDC57-207ENST00000419322 TAB2Q9NYJ8 693 aa17.08■□□□□ 0.33
CCDC57-207ENST00000419322 SOS2Q07890 1332 aaPredicted RBP17.08■□□□□ 0.32
CCDC57-207ENST00000419322 TXLNAP40222 546 aa17.08■□□□□ 0.32
CCDC57-207ENST00000419322 PKN1Q16512 942 aa17.08■□□□□ 0.32
CCDC57-207ENST00000419322 PIK3AP1Q6ZUJ8 805 aa17.08■□□□□ 0.32
CCDC57-207ENST00000419322 RSRC2Q7L4I2 434 aaKnown RBP17.08■□□□□ 0.32
CCDC57-207ENST00000419322 RASSF8Q8NHQ8 419 aa17.08■□□□□ 0.32
CCDC57-207ENST00000419322 PANX2Q96RD6 677 aa17.08■□□□□ 0.32
CCDC57-207ENST00000419322 ADD3Q9UEY8 706 aaKnown RBP17.08■□□□□ 0.32
CCDC57-207ENST00000419322 PLEKHG2Q9H7P9 1386 aa17.07■□□□□ 0.32
CCDC57-207ENST00000419322 NMT2O60551 498 aa17.07■□□□□ 0.32
CCDC57-207ENST00000419322 NLRP5P59047 1200 aa17.07■□□□□ 0.32
CCDC57-207ENST00000419322 LONRF2Q1L5Z9 754 aa17.07■□□□□ 0.32
CCDC57-207ENST00000419322 TTC38Q5R3I4 469 aa17.07■□□□□ 0.32
CCDC57-207ENST00000419322 IQCA1Q86XH1 822 aa17.07■□□□□ 0.32
CCDC57-207ENST00000419322 SLC35F6Q8N357 371 aa17.07■□□□□ 0.32
CCDC57-207ENST00000419322 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.07■□□□□ 0.32
CCDC57-207ENST00000419322 CALCOCO1Q9P1Z2 691 aa17.07■□□□□ 0.32
CCDC57-207ENST00000419322 CCDC152Q4G0S7 254 aa17.07■□□□□ 0.32
CCDC57-207ENST00000419322 ZNF34Q8IZ26 560 aa17.07■□□□□ 0.32
CCDC57-207ENST00000419322 NIP7Q9Y221 180 aaKnown RBP eCLIP17.07■□□□□ 0.32
CCDC57-207ENST00000419322 EVX2Q03828 476 aa17.06■□□□□ 0.32
CCDC57-207ENST00000419322 DPYDQ12882 1025 aa17.06■□□□□ 0.32
CCDC57-207ENST00000419322 FAM47AQ5JRC9 791 aa17.06■□□□□ 0.32
CCDC57-207ENST00000419322 WWC2Q6AWC2 1192 aa17.06■□□□□ 0.32
CCDC57-207ENST00000419322 CTAGE1Q96RT6 745 aa17.06■□□□□ 0.32
CCDC57-207ENST00000419322 PPP1R3GB7ZBB8 358 aa17.06■□□□□ 0.32
CCDC57-207ENST00000419322 MFAP3LO75121 409 aa17.06■□□□□ 0.32
CCDC57-207ENST00000419322 CUL4BQ13620 913 aa17.06■□□□□ 0.32
CCDC57-207ENST00000419322 SEC23AQ15436 765 aa17.06■□□□□ 0.32
CCDC57-207ENST00000419322 APTXQ7Z2E3 356 aaKnown RBP17.06■□□□□ 0.32
CCDC57-207ENST00000419322 SRGAP1Q7Z6B7 1085 aa17.06■□□□□ 0.32
CCDC57-207ENST00000419322 SPATA20Q8TB22 786 aa17.06■□□□□ 0.32
CCDC57-207ENST00000419322 SLF1Q9BQI6 1058 aa17.06■□□□□ 0.32
CCDC57-207ENST00000419322 PHF20Q9BVI0 1012 aa17.06■□□□□ 0.32
CCDC57-207ENST00000419322 RNF216Q9NWF9 866 aaPredicted RBP17.06■□□□□ 0.32
CCDC57-207ENST00000419322 CTAGE9A4FU28 777 aa17.06■□□□□ 0.32
CCDC57-207ENST00000419322 GYPCP04921 128 aa17.06■□□□□ 0.32
CCDC57-207ENST00000419322 JAKMIP3Q5VZ66 844 aa17.06■□□□□ 0.32
CCDC57-207ENST00000419322 EEF2KMTQ96G04 330 aa17.06■□□□□ 0.32
CCDC57-207ENST00000419322 ACSBG1Q96GR2 724 aa17.06■□□□□ 0.32
CCDC57-207ENST00000419322 GSDMAQ96QA5 445 aa17.06■□□□□ 0.32
CCDC57-207ENST00000419322 PLIN2Q99541 437 aa17.06■□□□□ 0.32
CCDC57-207ENST00000419322 PNPLA7Q6ZV29 1317 aa17.05■□□□□ 0.32
CCDC57-207ENST00000419322 MYH7P12883 1935 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms