RNA–Protein interactions for RNA: ENST00000419225.1

AC008060.3-201, humanhuman

TSL 4 BASIC

Gene AC008060.3, Length 534 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008060.3-201ENST00000419225 COL11A1P12107 1806 aaPredicted RBP11.26□□□□□ -0.61
AC008060.3-201ENST00000419225 GDF11O95390 407 aa11.26□□□□□ -0.61
AC008060.3-201ENST00000419225 IRX3P78415 501 aaPredicted RBP11.26□□□□□ -0.61
AC008060.3-201ENST00000419225 IRF5Q13568 498 aa11.26□□□□□ -0.61
AC008060.3-201ENST00000419225 TREML2Q5T2D2 321 aa11.26□□□□□ -0.61
AC008060.3-201ENST00000419225 C16orf86Q6ZW13 317 aa11.26□□□□□ -0.61
AC008060.3-201ENST00000419225 CCDC84Q86UT8 332 aaPredicted RBP11.26□□□□□ -0.61
AC008060.3-201ENST00000419225 ASCC2Q9H1I8 757 aaPredicted RBP11.26□□□□□ -0.61
AC008060.3-201ENST00000419225 RWDD1Q9H446 243 aaPredicted RBP11.26□□□□□ -0.61
AC008060.3-201ENST00000419225 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.26□□□□□ -0.61
AC008060.3-201ENST00000419225 PTCH2Q9Y6C5 1203 aa11.26□□□□□ -0.61
AC008060.3-201ENST00000419225 MYPNQ86TC9 1320 aa11.26□□□□□ -0.61
AC008060.3-201ENST00000419225 FMNL1O95466 1100 aaPredicted RBP11.25□□□□□ -0.61
AC008060.3-201ENST00000419225 JAG1P78504 1218 aa11.25□□□□□ -0.61
AC008060.3-201ENST00000419225 CAP1Q01518 475 aa11.25□□□□□ -0.61
AC008060.3-201ENST00000419225 LBX2Q6XYB7 198 aa11.25□□□□□ -0.61
AC008060.3-201ENST00000419225 SLAIN1Q8ND83 568 aa11.25□□□□□ -0.61
AC008060.3-201ENST00000419225 PXYLP1Q8TE99 480 aa11.25□□□□□ -0.61
AC008060.3-201ENST00000419225 LPAR1Q92633 364 aa11.25□□□□□ -0.61
AC008060.3-201ENST00000419225 COA7Q96BR5 231 aa11.25□□□□□ -0.61
AC008060.3-201ENST00000419225 STRBPQ96SI9 672 aaKnown RBP11.25□□□□□ -0.61
AC008060.3-201ENST00000419225 FEZ1Q99689 392 aa11.25□□□□□ -0.61
AC008060.3-201ENST00000419225 PUS7LQ9H0K6 701 aaKnown RBP11.25□□□□□ -0.61
AC008060.3-201ENST00000419225 ZNF287Q9HBT7 754 aa11.25□□□□□ -0.61
AC008060.3-201ENST00000419225 SLC4A4Q9Y6R1 1079 aa11.25□□□□□ -0.61
AC008060.3-201ENST00000419225 FRMPD3Q5JV73 1810 aa11.24□□□□□ -0.61
AC008060.3-201ENST00000419225 USP17L15C9J2P7 530 aa11.24□□□□□ -0.61
AC008060.3-201ENST00000419225 USP17L13C9JLJ4 530 aa11.24□□□□□ -0.61
AC008060.3-201ENST00000419225 USP17L12C9JPN9 530 aa11.24□□□□□ -0.61
AC008060.3-201ENST00000419225 USP17L11C9JVI0 530 aa11.24□□□□□ -0.61
AC008060.3-201ENST00000419225 USP17L21D6R901 530 aa11.24□□□□□ -0.61
AC008060.3-201ENST00000419225 USP17L18D6R9N7 530 aa11.24□□□□□ -0.61
AC008060.3-201ENST00000419225 USP17L22D6RA61 530 aa11.24□□□□□ -0.61
AC008060.3-201ENST00000419225 USP17L17D6RBQ6 530 aa11.24□□□□□ -0.61
AC008060.3-201ENST00000419225 USP17L19D6RCP7 530 aa11.24□□□□□ -0.61
AC008060.3-201ENST00000419225 USP17L20D6RJB6 530 aa11.24□□□□□ -0.61
AC008060.3-201ENST00000419225 TNPO2O14787 897 aaKnown RBP11.24□□□□□ -0.61
AC008060.3-201ENST00000419225 GPAA1O43292 621 aa11.24□□□□□ -0.61
AC008060.3-201ENST00000419225 SOX10P56693 466 aa11.24□□□□□ -0.61
AC008060.3-201ENST00000419225 HERVK_113P62684 666 aa11.24□□□□□ -0.61
AC008060.3-201ENST00000419225 USP17L24Q0WX57 530 aa11.24□□□□□ -0.61
AC008060.3-201ENST00000419225 RAB3GAP1Q15042 981 aa11.24□□□□□ -0.61
AC008060.3-201ENST00000419225 ANKRD45Q5TZF3 282 aa11.24□□□□□ -0.61
AC008060.3-201ENST00000419225 RAET1EQ8TD07 263 aa11.24□□□□□ -0.61
AC008060.3-201ENST00000419225 EVI5LQ96CN4 794 aa11.24□□□□□ -0.61
AC008060.3-201ENST00000419225 FSD1Q9BTV5 496 aa11.24□□□□□ -0.61
AC008060.3-201ENST00000419225 TMEM106CQ9BVX2 250 aa11.24□□□□□ -0.61
AC008060.3-201ENST00000419225 ARHGAP39Q9C0H5 1083 aa11.24□□□□□ -0.61
AC008060.3-201ENST00000419225 BCL11AQ9H165 835 aa11.24□□□□□ -0.61
AC008060.3-201ENST00000419225 ARHGEF10LQ9HCE6 1279 aa11.24□□□□□ -0.61
AC008060.3-201ENST00000419225 SYNPO2Q9UMS6 1093 aa11.24□□□□□ -0.61
AC008060.3-201ENST00000419225 ZNFX1Q9P2E3 1918 aaKnown RBP11.23□□□□□ -0.61
AC008060.3-201ENST00000419225 CTGFP29279 349 aa11.23□□□□□ -0.61
AC008060.3-201ENST00000419225 GRK4P32298 578 aa11.23□□□□□ -0.61
AC008060.3-201ENST00000419225 GUCY1A2P33402 732 aa11.23□□□□□ -0.61
AC008060.3-201ENST00000419225 PDE1AP54750 535 aa11.23□□□□□ -0.61
AC008060.3-201ENST00000419225 SLC4A8Q2Y0W8 1093 aa11.23□□□□□ -0.61
AC008060.3-201ENST00000419225 ZMYM1Q5SVZ6 1142 aa11.23□□□□□ -0.61
AC008060.3-201ENST00000419225 CTR9Q6PD62 1173 aa11.23□□□□□ -0.61
AC008060.3-201ENST00000419225 ANKRD13CQ8N6S4 541 aa11.23□□□□□ -0.61
AC008060.3-201ENST00000419225 SOCS4Q8WXH5 440 aa11.23□□□□□ -0.61
AC008060.3-201ENST00000419225 OSBP2Q969R2 916 aa11.23□□□□□ -0.61
AC008060.3-201ENST00000419225 NACAP1Q9BZK3 213 aa11.23□□□□□ -0.61
AC008060.3-201ENST00000419225 OSBPL3Q9H4L5 887 aa11.23□□□□□ -0.61
AC008060.3-201ENST00000419225 EMILIN3Q9NT22 766 aa11.23□□□□□ -0.61
AC008060.3-201ENST00000419225 RABGAP1Q9Y3P9 1069 aa11.23□□□□□ -0.61
AC008060.3-201ENST00000419225 GSG1L2A8MUP6 293 aa11.22□□□□□ -0.61
AC008060.3-201ENST00000419225 PRKAB2O43741 272 aa11.22□□□□□ -0.61
AC008060.3-201ENST00000419225 VCAM1P19320 739 aa11.22□□□□□ -0.61
AC008060.3-201ENST00000419225 MAPK4P31152 587 aa11.22□□□□□ -0.61
AC008060.3-201ENST00000419225 CDK8P49336 464 aa11.22□□□□□ -0.61
AC008060.3-201ENST00000419225 UBXN2AP68543 259 aa11.22□□□□□ -0.61
AC008060.3-201ENST00000419225 CCNA1P78396 465 aa11.22□□□□□ -0.61
AC008060.3-201ENST00000419225 PRKCZQ05513 592 aa11.22□□□□□ -0.61
AC008060.3-201ENST00000419225 GPRC5AQ8NFJ5 357 aa11.22□□□□□ -0.61
AC008060.3-201ENST00000419225 NKX2-3Q8TAU0 364 aa11.22□□□□□ -0.61
AC008060.3-201ENST00000419225 PLIN4Q96Q06 1357 aa11.22□□□□□ -0.61
AC008060.3-201ENST00000419225 KANSL2Q9H9L4 492 aa11.22□□□□□ -0.61
AC008060.3-201ENST00000419225 PLXNA1Q9UIW2 1896 aa11.22□□□□□ -0.61
AC008060.3-201ENST00000419225 TMX2Q9Y320 296 aa11.22□□□□□ -0.61
AC008060.3-201ENST00000419225 ZMYM6O95789 1325 aa11.21□□□□□ -0.61
AC008060.3-201ENST00000419225 PATL2C9JE40 543 aaKnown RBP11.21□□□□□ -0.61
AC008060.3-201ENST00000419225 MPHOSPH10O00566 681 aaKnown RBP11.21□□□□□ -0.61
AC008060.3-201ENST00000419225 WDR46O15213 610 aaKnown RBP11.21□□□□□ -0.61
AC008060.3-201ENST00000419225 SLC3A2P08195 630 aaKnown RBP11.21□□□□□ -0.61
AC008060.3-201ENST00000419225 XRCC5P13010 732 aaKnown RBP11.21□□□□□ -0.61
AC008060.3-201ENST00000419225 ERVK-9P63128 1117 aa11.21□□□□□ -0.61
AC008060.3-201ENST00000419225 ERVK-24P63145 666 aa11.21□□□□□ -0.61
AC008060.3-201ENST00000419225 NUCB1Q02818 461 aa11.21□□□□□ -0.61
AC008060.3-201ENST00000419225 ICA1Q05084 483 aa11.21□□□□□ -0.61
AC008060.3-201ENST00000419225 SEPT2Q15019 361 aa11.21□□□□□ -0.61
AC008060.3-201ENST00000419225 SHROOM1Q2M3G4 852 aaPredicted RBP11.21□□□□□ -0.61
AC008060.3-201ENST00000419225 PPP4R3BQ5MIZ7 849 aa11.21□□□□□ -0.61
AC008060.3-201ENST00000419225 TSHZ3Q63HK5 1081 aa11.21□□□□□ -0.61
AC008060.3-201ENST00000419225 CATSPERGQ6ZRH7 1159 aa11.21□□□□□ -0.61
AC008060.3-201ENST00000419225 TRMT44Q8IYL2 757 aaKnown RBP11.21□□□□□ -0.61
AC008060.3-201ENST00000419225 MB21D1Q8N884 522 aa11.21□□□□□ -0.61
AC008060.3-201ENST00000419225 OTUD7AQ8TE49 926 aaPredicted RBP11.21□□□□□ -0.61
AC008060.3-201ENST00000419225 HELLSQ9NRZ9 838 aa11.21□□□□□ -0.61
AC008060.3-201ENST00000419225 CHGBP05060 677 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 109.5 ms