RNA–Protein interactions for RNA: ENST00000418664.2

DSP-202, Transcript of desmoplakin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DSP, Length 7,812 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DSP-202ENST00000418664 ARHGEF3Q9NR81 526 aa13□□□□□ -0.33
DSP-202ENST00000418664 HDAC9Q9UKV0 1011 aa13□□□□□ -0.33
DSP-202ENST00000418664 PARP3Q9Y6F1 533 aa13□□□□□ -0.33
DSP-202ENST00000418664 RASSF10A6NK89 507 aa13□□□□□ -0.33
DSP-202ENST00000418664 RBM26Q5T8P6 1007 aaKnown RBP13□□□□□ -0.33
DSP-202ENST00000418664 C11orf88Q6PI97 169 aa13□□□□□ -0.33
DSP-202ENST00000418664 CCDC105Q8IYK2 499 aa13□□□□□ -0.33
DSP-202ENST00000418664 EIF4E1BA6NMX2 242 aaKnown RBP13□□□□□ -0.33
DSP-202ENST00000418664 GPIHBP1Q8IV16 184 aa13□□□□□ -0.33
DSP-202ENST00000418664 KCTD17Q8N5Z5 321 aa13□□□□□ -0.33
DSP-202ENST00000418664 GSDMAQ96QA5 445 aa13□□□□□ -0.33
DSP-202ENST00000418664 NAPGQ99747 312 aaPredicted RBP13□□□□□ -0.33
DSP-202ENST00000418664 TMA7Q9Y2S6 64 aaKnown RBP13□□□□□ -0.33
DSP-202ENST00000418664 BTBD11A6QL63 1104 aa12.99□□□□□ -0.33
DSP-202ENST00000418664 TSC22D2O75157 780 aa12.99□□□□□ -0.33
DSP-202ENST00000418664 DDAH1O94760 285 aa12.99□□□□□ -0.33
DSP-202ENST00000418664 LONRF3Q496Y0 759 aa12.99□□□□□ -0.33
DSP-202ENST00000418664 LZICQ8WZA0 190 aa12.99□□□□□ -0.33
DSP-202ENST00000418664 GPHNQ9NQX3 736 aaPredicted RBP12.99□□□□□ -0.33
DSP-202ENST00000418664 SH2B1Q9NRF2 756 aaPredicted RBP12.99□□□□□ -0.33
DSP-202ENST00000418664 RAB14P61106 215 aa12.99□□□□□ -0.33
DSP-202ENST00000418664 KIFAP3Q92845 792 aa12.99□□□□□ -0.33
DSP-202ENST00000418664 C6orf50Q9HD87 102 aa12.99□□□□□ -0.33
DSP-202ENST00000418664 APOA1P02647 267 aa12.99□□□□□ -0.33
DSP-202ENST00000418664 CEP55Q53EZ4 464 aa12.99□□□□□ -0.33
DSP-202ENST00000418664 TAGAPQ8N103 731 aa12.99□□□□□ -0.33
DSP-202ENST00000418664 GINS4Q9BRT9 223 aa12.99□□□□□ -0.33
DSP-202ENST00000418664 KIFC3Q9BVG8 833 aa12.99□□□□□ -0.33
DSP-202ENST00000418664 CARD6Q9BX69 1037 aa12.99□□□□□ -0.33
DSP-202ENST00000418664 OSBPL10Q9BXB5 764 aa12.99□□□□□ -0.33
DSP-202ENST00000418664 SLC9A1P19634 815 aa12.99□□□□□ -0.33
DSP-202ENST00000418664 DMPKQ09013 629 aa12.99□□□□□ -0.33
DSP-202ENST00000418664 DHX58Q96C10 678 aa12.99□□□□□ -0.33
DSP-202ENST00000418664 WDR47O94967 919 aa12.99□□□□□ -0.33
DSP-202ENST00000418664 TNFAIP3P21580 790 aa12.99□□□□□ -0.33
DSP-202ENST00000418664 EXOSC9Q06265 439 aaKnown RBP12.99□□□□□ -0.33
DSP-202ENST00000418664 IFNKQ9P0W0 207 aa12.99□□□□□ -0.33
DSP-202ENST00000418664 USP16Q9Y5T5 823 aa12.99□□□□□ -0.33
DSP-202ENST00000418664 TCF3P15923 654 aa12.98□□□□□ -0.33
DSP-202ENST00000418664 MARCKSP29966 332 aaPredicted RBP12.98□□□□□ -0.33
DSP-202ENST00000418664 SLC44A4Q53GD3 710 aa12.98□□□□□ -0.33
DSP-202ENST00000418664 TUBBP07437 444 aa12.98□□□□□ -0.33
DSP-202ENST00000418664 CCT4P50991 539 aaKnown RBP12.98□□□□□ -0.33
DSP-202ENST00000418664 PDE4BQ07343 736 aa12.98□□□□□ -0.33
DSP-202ENST00000418664 ASPHQ12797 758 aa12.98□□□□□ -0.33
DSP-202ENST00000418664 SND1Q7KZF4 910 aaKnown RBP eCLIP12.98□□□□□ -0.331e-7■■□□□ 12.3
DSP-202ENST00000418664 NOSTRINQ8IVI9 506 aa12.98□□□□□ -0.33
DSP-202ENST00000418664 NECAB1Q8N987 351 aa12.98□□□□□ -0.33
DSP-202ENST00000418664 HOOK2Q96ED9 719 aa12.98□□□□□ -0.33
DSP-202ENST00000418664 SMARCA5O60264 1052 aaPredicted RBP12.98□□□□□ -0.33
DSP-202ENST00000418664 SLC5A1P13866 664 aa12.98□□□□□ -0.33
DSP-202ENST00000418664 IARSP41252 1262 aaKnown RBP12.98□□□□□ -0.33
DSP-202ENST00000418664 TMED10P49755 219 aaKnown RBP12.98□□□□□ -0.33
DSP-202ENST00000418664 MCCD1P59942 119 aaPredicted RBP12.98□□□□□ -0.33
DSP-202ENST00000418664 PICALMQ13492 652 aa12.98□□□□□ -0.33
DSP-202ENST00000418664 AKIRIN2Q53H80 203 aa12.98□□□□□ -0.33
DSP-202ENST00000418664 RYBPQ8N488 228 aaPredicted RBP12.98□□□□□ -0.33
DSP-202ENST00000418664 GOLGA5Q8TBA6 731 aa12.98□□□□□ -0.33
DSP-202ENST00000418664 FAM8A1Q9UBU6 413 aa12.98□□□□□ -0.33
DSP-202ENST00000418664 GPRASP1Q5JY77 1395 aa12.98□□□□□ -0.33
DSP-202ENST00000418664 ZKSCAN3Q9BRR0 538 aa12.98□□□□□ -0.33
DSP-202ENST00000418664 UBN1Q9NPG3 1134 aa12.98□□□□□ -0.33
DSP-202ENST00000418664 CCDC7Q96M83 1385 aa12.98□□□□□ -0.33
DSP-202ENST00000418664 GOLGA8RI6L899 631 aa12.98□□□□□ -0.33
DSP-202ENST00000418664 KRT73Q86Y46 540 aa12.98□□□□□ -0.33
DSP-202ENST00000418664 OTULINQ96BN8 352 aa12.98□□□□□ -0.33
DSP-202ENST00000418664 BEGAINQ9BUH8 593 aa12.98□□□□□ -0.33
DSP-202ENST00000418664 RNF41Q9H4P4 317 aaPredicted RBP12.98□□□□□ -0.33
DSP-202ENST00000418664 AIPL1Q9NZN9 384 aa12.98□□□□□ -0.33
DSP-202ENST00000418664 GPC4O75487 556 aa12.97□□□□□ -0.33
DSP-202ENST00000418664 PDHA1P08559 390 aa12.97□□□□□ -0.33
DSP-202ENST00000418664 EEF1GP26641 437 aaKnown RBP12.97□□□□□ -0.33
DSP-202ENST00000418664 GABPB1Q06547 395 aaPredicted RBP12.97□□□□□ -0.33
DSP-202ENST00000418664 ECE1P42892 770 aa12.97□□□□□ -0.33
DSP-202ENST00000418664 OLFML2BQ68BL8 750 aa12.97□□□□□ -0.33
DSP-202ENST00000418664 CATSPER3Q86XQ3 398 aa12.97□□□□□ -0.33
DSP-202ENST00000418664 UTP6Q9NYH9 597 aaKnown RBP12.97□□□□□ -0.33
DSP-202ENST00000418664 IQCB1Q15051 598 aa12.97□□□□□ -0.33
DSP-202ENST00000418664 TMTC3Q6ZXV5 915 aa12.97□□□□□ -0.33
DSP-202ENST00000418664 PLIN2Q99541 437 aa12.97□□□□□ -0.33
DSP-202ENST00000418664 EVI5O60447 810 aa12.97□□□□□ -0.33
DSP-202ENST00000418664 CAPN1P07384 714 aa12.97□□□□□ -0.33
DSP-202ENST00000418664 HAND2P61296 217 aa12.97□□□□□ -0.33
DSP-202ENST00000418664 GRAMD1BQ3KR37 738 aa12.97□□□□□ -0.33
DSP-202ENST00000418664 ALKBH8Q96BT7 664 aaKnown RBP12.97□□□□□ -0.33
DSP-202ENST00000418664 SAAL1Q96ER3 474 aa12.97□□□□□ -0.33
DSP-202ENST00000418664 ERO1AQ96HE7 468 aa12.97□□□□□ -0.33
DSP-202ENST00000418664 EFHD1Q9BUP0 239 aa12.97□□□□□ -0.33
DSP-202ENST00000418664 CARD10Q9BWT7 1032 aa12.97□□□□□ -0.33
DSP-202ENST00000418664 SPG7Q9UQ90 795 aa12.97□□□□□ -0.33
DSP-202ENST00000418664 LZTS3O60299 673 aaPredicted RBP12.97□□□□□ -0.33
DSP-202ENST00000418664 KLHL29Q96CT2 875 aa12.97□□□□□ -0.33
DSP-202ENST00000418664 HS2ST1Q7LGA3 356 aa12.97□□□□□ -0.33
DSP-202ENST00000418664 ZC3H18Q86VM9 953 aaKnown RBP12.97□□□□□ -0.33
DSP-202ENST00000418664 RNF169Q8NCN4 708 aa12.97□□□□□ -0.33
DSP-202ENST00000418664 MED10Q9BTT4 135 aa12.97□□□□□ -0.33
DSP-202ENST00000418664 STARD3NLO95772 234 aa12.96□□□□□ -0.33
DSP-202ENST00000418664 MRPS35P82673 323 aaKnown RBP12.96□□□□□ -0.33
DSP-202ENST00000418664 DEUP1Q05D60 604 aa12.96□□□□□ -0.33
DSP-202ENST00000418664 CCDC149Q6ZUS6 474 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms