RNA–Protein interactions for RNA: ENST00000415788.2

SGCE-202, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-202ENST00000415788 IL17RAQ96F46 866 aa17.05■□□□□ 0.32
SGCE-202ENST00000415788 CREBZFQ9NS37 354 aa17.05■□□□□ 0.32
SGCE-202ENST00000415788 B4E1Z4 1266 aa17.05■□□□□ 0.32
SGCE-202ENST00000415788 KDM4AO75164 1064 aa17.05■□□□□ 0.32
SGCE-202ENST00000415788 IQCA1Q86XH1 822 aa17.05■□□□□ 0.32
SGCE-202ENST00000415788 TRIM44Q96DX7 344 aaPredicted RBP17.05■□□□□ 0.32
SGCE-202ENST00000415788 HHIPL1Q96JK4 782 aa17.05■□□□□ 0.32
SGCE-202ENST00000415788 NEK1Q96PY6 1258 aa17.05■□□□□ 0.32
SGCE-202ENST00000415788 RAB3GAP1Q15042 981 aa17.04■□□□□ 0.32
SGCE-202ENST00000415788 CCDC178Q5BJE1 867 aa17.04■□□□□ 0.32
SGCE-202ENST00000415788 FAM47AQ5JRC9 791 aa17.04■□□□□ 0.32
SGCE-202ENST00000415788 KANSL2Q9H9L4 492 aa17.04■□□□□ 0.32
SGCE-202ENST00000415788 TCP11L1Q9NUJ3 509 aa17.04■□□□□ 0.32
SGCE-202ENST00000415788 ABT1Q9ULW3 272 aaKnown RBP17.04■□□□□ 0.32
SGCE-202ENST00000415788 SNCAIPQ9Y6H5 919 aa17.04■□□□□ 0.32
SGCE-202ENST00000415788 PTPRAP18433 802 aa17.03■□□□□ 0.32
SGCE-202ENST00000415788 HSP90AA2PQ14568 343 aaPredicted RBP17.03■□□□□ 0.32
SGCE-202ENST00000415788 ERO1BQ86YB8 467 aa17.03■□□□□ 0.32
SGCE-202ENST00000415788 MB21D2Q8IYB1 491 aaPredicted RBP17.03■□□□□ 0.32
SGCE-202ENST00000415788 SLC10A4Q96EP9 437 aa17.03■□□□□ 0.32
SGCE-202ENST00000415788 MTA3Q9BTC8 594 aa17.03■□□□□ 0.32
SGCE-202ENST00000415788 TM6SF1Q9BZW5 370 aa17.03■□□□□ 0.32
SGCE-202ENST00000415788 AS3MTQ9HBK9 375 aa17.03■□□□□ 0.32
SGCE-202ENST00000415788 ZSWIM5Q9P217 1185 aa17.03■□□□□ 0.32
SGCE-202ENST00000415788 SPDYE5A6NIY4 337 aa17.03■□□□□ 0.32
SGCE-202ENST00000415788 USP17L5A8MUK1 530 aa17.03■□□□□ 0.32
SGCE-202ENST00000415788 MCM5P33992 734 aa17.03■□□□□ 0.32
SGCE-202ENST00000415788 JAKMIP1Q96N16 626 aaKnown RBP17.03■□□□□ 0.32
SGCE-202ENST00000415788 IGKV6D-41A0A0C4DH26 115 aa17.02■□□□□ 0.32
SGCE-202ENST00000415788 JAG1P78504 1218 aa17.02■□□□□ 0.32
SGCE-202ENST00000415788 PPATQ06203 517 aa17.02■□□□□ 0.32
SGCE-202ENST00000415788 SEPT2Q15019 361 aa17.02■□□□□ 0.32
SGCE-202ENST00000415788 SART3Q15020 963 aaKnown RBP17.02■□□□□ 0.32
SGCE-202ENST00000415788 ADCK5Q3MIX3 580 aa17.02■□□□□ 0.32
SGCE-202ENST00000415788 TNPO1Q92973 898 aaKnown RBP17.02■□□□□ 0.32
SGCE-202ENST00000415788 CLMNQ96JQ2 1002 aa17.02■□□□□ 0.32
SGCE-202ENST00000415788 UBAC1Q9BSL1 405 aa17.02■□□□□ 0.32
SGCE-202ENST00000415788 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.02■□□□□ 0.32
SGCE-202ENST00000415788 ELP3Q9H9T3 547 aa17.02■□□□□ 0.32
SGCE-202ENST00000415788 WDR19Q8NEZ3 1342 aa17.02■□□□□ 0.32
SGCE-202ENST00000415788 TPM2P07951 284 aa17.01■□□□□ 0.31
SGCE-202ENST00000415788 GUCY1A2P33402 732 aa17.01■□□□□ 0.31
SGCE-202ENST00000415788 ICA1Q05084 483 aa17.01■□□□□ 0.31
SGCE-202ENST00000415788 RGMBQ6NW40 437 aa17.01■□□□□ 0.31
SGCE-202ENST00000415788 BLOC1S2Q6QNY1 142 aa17.01■□□□□ 0.31
SGCE-202ENST00000415788 DHX32Q7L7V1 743 aaKnown RBP17.01■□□□□ 0.31
SGCE-202ENST00000415788 C1QTNF8P60827 252 aa17.01■□□□□ 0.31
SGCE-202ENST00000415788 SHROOM1Q2M3G4 852 aaPredicted RBP17.01■□□□□ 0.31
SGCE-202ENST00000415788 CEP95Q96GE4 821 aa17.01■□□□□ 0.31
SGCE-202ENST00000415788 TTC14Q96N46 770 aa17.01■□□□□ 0.31
SGCE-202ENST00000415788 ZSCAN10Q96SZ4 725 aaPredicted RBP17.01■□□□□ 0.31
SGCE-202ENST00000415788 WDR18Q9BV38 432 aa17.01■□□□□ 0.31
SGCE-202ENST00000415788 MTMR4Q9NYA4 1195 aa17.01■□□□□ 0.31
SGCE-202ENST00000415788 NYAP2Q9P242 653 aa17.01■□□□□ 0.31
SGCE-202ENST00000415788 SYNPO2Q9UMS6 1093 aa17.01■□□□□ 0.31
SGCE-202ENST00000415788 ZHX2Q9Y6X8 837 aa17.01■□□□□ 0.31
SGCE-202ENST00000415788 DOCK1Q14185 1865 aa17■□□□□ 0.31
SGCE-202ENST00000415788 ERICH2A1L162 156 aa17■□□□□ 0.31
SGCE-202ENST00000415788 TTLL1O95922 423 aa17■□□□□ 0.31
SGCE-202ENST00000415788 DGKHQ86XP1 1220 aa17■□□□□ 0.31
SGCE-202ENST00000415788 TMEM87BQ96K49 555 aa17■□□□□ 0.31
SGCE-202ENST00000415788 SH2D4AQ9H788 454 aa17■□□□□ 0.31
SGCE-202ENST00000415788 ARHGEF10LQ9HCE6 1279 aa17■□□□□ 0.31
SGCE-202ENST00000415788 ZSWIM6Q9HCJ5 1215 aa17■□□□□ 0.31
SGCE-202ENST00000415788 IL17RBQ9NRM6 502 aa17■□□□□ 0.31
SGCE-202ENST00000415788 ZBTB48P10074 688 aaPredicted RBP16.99■□□□□ 0.31
SGCE-202ENST00000415788 MYH8P13535 1937 aa16.99■□□□□ 0.31
SGCE-202ENST00000415788 CASTP20810 708 aaKnown RBP16.99■□□□□ 0.31
SGCE-202ENST00000415788 NOVP48745 357 aa16.99■□□□□ 0.31
SGCE-202ENST00000415788 ZNF157P51786 506 aaPredicted RBP16.99■□□□□ 0.31
SGCE-202ENST00000415788 PPIL2Q13356 520 aa16.99■□□□□ 0.31
SGCE-202ENST00000415788 CLEC17AQ6ZS10 378 aa16.99■□□□□ 0.31
SGCE-202ENST00000415788 CYB5R4Q7L1T6 521 aa16.99■□□□□ 0.31
SGCE-202ENST00000415788 ZNF280CQ8ND82 737 aa16.99■□□□□ 0.31
SGCE-202ENST00000415788 CCDC102AQ96A19 550 aa16.99■□□□□ 0.31
SGCE-202ENST00000415788 OPTNQ96CV9 577 aa16.99■□□□□ 0.31
SGCE-202ENST00000415788 OTOFQ9HC10 1997 aa16.99■□□□□ 0.31
SGCE-202ENST00000415788 CYP46A1Q9Y6A2 500 aa16.99■□□□□ 0.31
SGCE-202ENST00000415788 TNKSO95271 1327 aa16.99■□□□□ 0.31
SGCE-202ENST00000415788 RASSF10A6NK89 507 aa16.99■□□□□ 0.31
SGCE-202ENST00000415788 PRC1O43663 620 aa16.99■□□□□ 0.31
SGCE-202ENST00000415788 ANTXR2P58335 489 aa16.99■□□□□ 0.31
SGCE-202ENST00000415788 CCDC173Q0VFZ6 552 aa16.99■□□□□ 0.31
SGCE-202ENST00000415788 RUFY3Q7L099 469 aa16.99■□□□□ 0.31
SGCE-202ENST00000415788 NKX2-3Q8TAU0 364 aa16.99■□□□□ 0.31
SGCE-202ENST00000415788 OTUD5Q96G74 571 aa16.99■□□□□ 0.31
SGCE-202ENST00000415788 AFG3L2Q9Y4W6 797 aa16.99■□□□□ 0.31
SGCE-202ENST00000415788 GREB1LQ9C091 1923 aaPredicted RBP16.98■□□□□ 0.31
SGCE-202ENST00000415788 GOLGA6L22H0YM25 854 aa16.98■□□□□ 0.31
SGCE-202ENST00000415788 CXCL11O14625 94 aa16.98■□□□□ 0.31
SGCE-202ENST00000415788 IFIT3O14879 490 aaKnown RBP16.98■□□□□ 0.31
SGCE-202ENST00000415788 NMT2O60551 498 aa16.98■□□□□ 0.31
SGCE-202ENST00000415788 EEF2P13639 858 aaKnown RBP16.98■□□□□ 0.31
SGCE-202ENST00000415788 RPS6KB1P23443 525 aa16.98■□□□□ 0.31
SGCE-202ENST00000415788 EXOSC10Q01780 885 aaKnown RBP16.98■□□□□ 0.31
SGCE-202ENST00000415788 ANKS1AQ92625 1134 aa16.98■□□□□ 0.31
SGCE-202ENST00000415788 MKL1Q969V6 931 aa16.98■□□□□ 0.31
SGCE-202ENST00000415788 WNK4Q96J92 1243 aa16.98■□□□□ 0.31
SGCE-202ENST00000415788 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.98■□□□□ 0.31
SGCE-202ENST00000415788 STX8Q9UNK0 236 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 116.1 ms