RNA–Protein interactions for RNA: ENST00000414241.7

RBBP4-204, Transcript of RB binding protein 4, chromatin remodeling factor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RBBP4, Length 1,788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBBP4-204ENST00000414241 GNL2Q13823 731 aaKnown RBP17.02■□□□□ 0.31
RBBP4-204ENST00000414241 OGFOD1Q8N543 542 aa17.02■□□□□ 0.31
RBBP4-204ENST00000414241 TMEM63CQ9P1W3 806 aa17.02■□□□□ 0.31
RBBP4-204ENST00000414241 DDX60LQ5H9U9 1706 aaKnown RBP17.02■□□□□ 0.31
RBBP4-204ENST00000414241 ENTPD3O75355 529 aa17.01■□□□□ 0.31
RBBP4-204ENST00000414241 TOP1P11387 765 aaKnown RBP17.01■□□□□ 0.31
RBBP4-204ENST00000414241 GRM4Q14833 912 aa17.01■□□□□ 0.31
RBBP4-204ENST00000414241 CFAP100Q494V2 611 aa17.01■□□□□ 0.31
RBBP4-204ENST00000414241 MYSM1Q5VVJ2 828 aa17.01■□□□□ 0.31
RBBP4-204ENST00000414241 AGBL3Q8NEM8 1001 aa17.01■□□□□ 0.31
RBBP4-204ENST00000414241 CCDC17Q96LX7 622 aa17.01■□□□□ 0.31
RBBP4-204ENST00000414241 AIFM3Q96NN9 605 aa17.01■□□□□ 0.31
RBBP4-204ENST00000414241 GMLQ99445 158 aa17.01■□□□□ 0.31
RBBP4-204ENST00000414241 TAOK3Q9H2K8 898 aa17.01■□□□□ 0.31
RBBP4-204ENST00000414241 PI4KBQ9UBF8 816 aa17.01■□□□□ 0.31
RBBP4-204ENST00000414241 STX8Q9UNK0 236 aa17.01■□□□□ 0.31
RBBP4-204ENST00000414241 YEATS4O95619 227 aa17■□□□□ 0.31
RBBP4-204ENST00000414241 MMP1P03956 469 aa17■□□□□ 0.31
RBBP4-204ENST00000414241 CCDC183Q5T5S1 534 aa17■□□□□ 0.31
RBBP4-204ENST00000414241 FOXP4Q8IVH2 680 aaPredicted RBP17■□□□□ 0.31
RBBP4-204ENST00000414241 CCDC82Q8N4S0 544 aa17■□□□□ 0.31
RBBP4-204ENST00000414241 USP28Q96RU2 1077 aa17■□□□□ 0.31
RBBP4-204ENST00000414241 TMEM47Q9BQJ4 181 aa17■□□□□ 0.31
RBBP4-204ENST00000414241 FOXP1Q9H334 677 aaPredicted RBP17■□□□□ 0.31
RBBP4-204ENST00000414241 POLR3EQ9NVU0 708 aa17■□□□□ 0.31
RBBP4-204ENST00000414241 PSMD14O00487 310 aa17■□□□□ 0.31
RBBP4-204ENST00000414241 NFIAQ12857 509 aa17■□□□□ 0.31
RBBP4-204ENST00000414241 GJB4Q9NTQ9 266 aa17■□□□□ 0.31
RBBP4-204ENST00000414241 V9GY48 417 aaPredicted RBP17■□□□□ 0.31
RBBP4-204ENST00000414241 RAD17O75943 681 aa16.99■□□□□ 0.31
RBBP4-204ENST00000414241 PLEKHA8P1O95397 391 aa16.99■□□□□ 0.31
RBBP4-204ENST00000414241 GUCY1A2P33402 732 aa16.99■□□□□ 0.31
RBBP4-204ENST00000414241 MRE11P49959 708 aa16.99■□□□□ 0.31
RBBP4-204ENST00000414241 FAM177A1Q8N128 213 aaPredicted RBP16.99■□□□□ 0.31
RBBP4-204ENST00000414241 SRBD1Q8N5C6 995 aaKnown RBP16.99■□□□□ 0.31
RBBP4-204ENST00000414241 KCNG4Q8TDN1 519 aa16.99■□□□□ 0.31
RBBP4-204ENST00000414241 JDP2Q8WYK2 163 aa16.99■□□□□ 0.31
RBBP4-204ENST00000414241 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.99■□□□□ 0.31
RBBP4-204ENST00000414241 TMOD2Q9NZR1 351 aa16.99■□□□□ 0.31
RBBP4-204ENST00000414241 LTBP3Q9NS15 1303 aa16.98■□□□□ 0.31
RBBP4-204ENST00000414241 SMARCA1P28370 1054 aa16.98■□□□□ 0.31
RBBP4-204ENST00000414241 NASPP49321 788 aaPredicted RBP16.98■□□□□ 0.31
RBBP4-204ENST00000414241 PKN1Q16512 942 aa16.98■□□□□ 0.31
RBBP4-204ENST00000414241 CMTR1Q8N1G2 835 aaKnown RBP16.98■□□□□ 0.31
RBBP4-204ENST00000414241 PPP1R1BQ9UD71 204 aaPredicted RBP16.98■□□□□ 0.31
RBBP4-204ENST00000414241 FAM198AQ9UFP1 575 aa16.98■□□□□ 0.31
RBBP4-204ENST00000414241 COL2A1P02458 1487 aaPredicted RBP16.98■□□□□ 0.31
RBBP4-204ENST00000414241 IGKV6D-41A0A0C4DH26 115 aa16.97■□□□□ 0.31
RBBP4-204ENST00000414241 KIF28PB7ZC32 967 aa16.97■□□□□ 0.31
RBBP4-204ENST00000414241 TNIP1Q15025 636 aa16.97■□□□□ 0.31
RBBP4-204ENST00000414241 DLGAP5Q15398 846 aa16.97■□□□□ 0.31
RBBP4-204ENST00000414241 NOSTRINQ8IVI9 506 aa16.97■□□□□ 0.31
RBBP4-204ENST00000414241 MTMR14Q8NCE2 650 aa16.97■□□□□ 0.31
RBBP4-204ENST00000414241 CEP95Q96GE4 821 aa16.97■□□□□ 0.31
RBBP4-204ENST00000414241 MTMR4Q9NYA4 1195 aa16.97■□□□□ 0.31
RBBP4-204ENST00000414241 CNTNAP5Q8WYK1 1306 aa16.97■□□□□ 0.31
RBBP4-204ENST00000414241 PALM3A6NDB9 673 aaPredicted RBP16.97■□□□□ 0.31
RBBP4-204ENST00000414241 SPDYE2BA6NHP3 402 aa16.97■□□□□ 0.31
RBBP4-204ENST00000414241 SPDYE6P0CI01 402 aa16.97■□□□□ 0.31
RBBP4-204ENST00000414241 SHMT1P34896 483 aa16.97■□□□□ 0.31
RBBP4-204ENST00000414241 PTGER2P43116 358 aa16.97■□□□□ 0.31
RBBP4-204ENST00000414241 FKBP1CQ5VVH2 108 aa16.97■□□□□ 0.31
RBBP4-204ENST00000414241 DIS3L2Q8IYB7 885 aaKnown RBP16.97■□□□□ 0.31
RBBP4-204ENST00000414241 LINC00301Q8NCQ3 95 aa16.97■□□□□ 0.31
RBBP4-204ENST00000414241 PRMT6Q96LA8 375 aaPredicted RBP16.97■□□□□ 0.31
RBBP4-204ENST00000414241 TRIM34Q9BYJ4 488 aa16.97■□□□□ 0.31
RBBP4-204ENST00000414241 TDRD3Q9H7E2 651 aaKnown RBP16.97■□□□□ 0.31
RBBP4-204ENST00000414241 BRMS1Q9HCU9 246 aa16.97■□□□□ 0.31
RBBP4-204ENST00000414241 ATRNL1Q5VV63 1379 aa16.96■□□□□ 0.31
RBBP4-204ENST00000414241 FOCADQ5VW36 1801 aa16.96■□□□□ 0.31
RBBP4-204ENST00000414241 SCG2P13521 617 aa16.96■□□□□ 0.31
RBBP4-204ENST00000414241 CEBPZQ03701 1054 aaKnown RBP16.96■□□□□ 0.31
RBBP4-204ENST00000414241 STK38Q15208 465 aa16.96■□□□□ 0.31
RBBP4-204ENST00000414241 PFKFB3Q16875 520 aaPredicted RBP16.96■□□□□ 0.31
RBBP4-204ENST00000414241 ANO1Q5XXA6 986 aa16.96■□□□□ 0.31
RBBP4-204ENST00000414241 CIAPIN1Q6FI81 312 aa16.96■□□□□ 0.31
RBBP4-204ENST00000414241 LRSAM1Q6UWE0 723 aa16.96■□□□□ 0.31
RBBP4-204ENST00000414241 METTL16Q86W50 562 aaKnown RBP16.96■□□□□ 0.31
RBBP4-204ENST00000414241 ZSCAN29Q8IWY8 852 aaPredicted RBP16.96■□□□□ 0.31
RBBP4-204ENST00000414241 SH3GLB2Q9NR46 395 aa16.96■□□□□ 0.31
RBBP4-204ENST00000414241 DDX19AQ9NUU7 478 aaKnown RBP16.96■□□□□ 0.31
RBBP4-204ENST00000414241 MAD2L2Q9UI95 211 aa16.96■□□□□ 0.31
RBBP4-204ENST00000414241 SCN9AQ15858 1988 aa16.95■□□□□ 0.3
RBBP4-204ENST00000414241 TTLL1O95922 423 aa16.95■□□□□ 0.3
RBBP4-204ENST00000414241 CXCL9Q07325 125 aa16.95■□□□□ 0.3
RBBP4-204ENST00000414241 TCP10Q12799 353 aa16.95■□□□□ 0.3
RBBP4-204ENST00000414241 SF3A1Q15459 793 aaKnown RBP16.95■□□□□ 0.3
RBBP4-204ENST00000414241 RILPL1Q5EBL4 403 aa16.95■□□□□ 0.3
RBBP4-204ENST00000414241 ZFPM1Q8IX07 1006 aa16.95■□□□□ 0.3
RBBP4-204ENST00000414241 BICD2Q8TD16 824 aa16.95■□□□□ 0.3
RBBP4-204ENST00000414241 PGBD1Q96JS3 809 aa16.95■□□□□ 0.3
RBBP4-204ENST00000414241 PHF20Q9BVI0 1012 aa16.95■□□□□ 0.3
RBBP4-204ENST00000414241 PCDHAC2Q9Y5I4 1007 aa16.95■□□□□ 0.3
RBBP4-204ENST00000414241 CDK5RAP2Q96SN8 1893 aa16.95■□□□□ 0.3
RBBP4-204ENST00000414241 A0A1W2PQ27 194 aa16.94■□□□□ 0.3
RBBP4-204ENST00000414241 A0A1W2PQ64 194 aa16.94■□□□□ 0.3
RBBP4-204ENST00000414241 A0A1W2PQD8 194 aa16.94■□□□□ 0.3
RBBP4-204ENST00000414241 SYCE3A1L190 88 aa16.94■□□□□ 0.3
RBBP4-204ENST00000414241 UBE2Q2LH0YL09 131 aa16.94■□□□□ 0.3
RBBP4-204ENST00000414241 PARP1P09874 1014 aaKnown RBP16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms