RNA–Protein interactions for RNA: ENST00000413806.7

SMARCA4-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5 BASIC

Gene SMARCA4, Length 5,512 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-202ENST00000413806 DKC1O60832 514 aaKnown RBP eCLIP15.26■□□□□ 0.03
SMARCA4-202ENST00000413806 RFC1P35251 1148 aaPredicted RBP15.26■□□□□ 0.03
SMARCA4-202ENST00000413806 CCDC84Q86UT8 332 aaPredicted RBP15.26■□□□□ 0.03
SMARCA4-202ENST00000413806 CABP7Q86V35 215 aa15.26■□□□□ 0.03
SMARCA4-202ENST00000413806 UBL4BQ8N7F7 174 aa15.26■□□□□ 0.03
SMARCA4-202ENST00000413806 TFCP2L1Q9NZI6 479 aa15.26■□□□□ 0.03
SMARCA4-202ENST00000413806 PRDM1O75626 825 aa15.26■□□□□ 0.03
SMARCA4-202ENST00000413806 KRT9P35527 623 aa15.26■□□□□ 0.03
SMARCA4-202ENST00000413806 CTSWP56202 376 aa15.26■□□□□ 0.03
SMARCA4-202ENST00000413806 PNMA8AQ86V59 439 aaPredicted RBP15.26■□□□□ 0.03
SMARCA4-202ENST00000413806 SPATS2LQ9NUQ6 558 aaKnown RBP15.26■□□□□ 0.03
SMARCA4-202ENST00000413806 WWC3Q9ULE0 1092 aa15.26■□□□□ 0.03
SMARCA4-202ENST00000413806 KCNJ14Q9UNX9 436 aa15.26■□□□□ 0.03
SMARCA4-202ENST00000413806 ZNF521Q96K83 1311 aa15.26■□□□□ 0.03
SMARCA4-202ENST00000413806 TAF5LO75529 589 aa15.25■□□□□ 0.03
SMARCA4-202ENST00000413806 PFKFB1P16118 471 aa15.25■□□□□ 0.03
SMARCA4-202ENST00000413806 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.25■□□□□ 0.032e-6■■□□□ 12.8
SMARCA4-202ENST00000413806 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.25■□□□□ 0.03
SMARCA4-202ENST00000413806 NDUFB9Q9Y6M9 179 aa15.25■□□□□ 0.03
SMARCA4-202ENST00000413806 MTX1Q13505 466 aa15.25■□□□□ 0.03
SMARCA4-202ENST00000413806 NEDD9Q14511 834 aa15.25■□□□□ 0.03
SMARCA4-202ENST00000413806 CALCRLQ16602 461 aa15.25■□□□□ 0.03
SMARCA4-202ENST00000413806 TRIML1Q8N9V2 468 aa15.25■□□□□ 0.03
SMARCA4-202ENST00000413806 RAB3IL1Q8TBN0 382 aa15.25■□□□□ 0.03
SMARCA4-202ENST00000413806 TSC1Q92574 1164 aa15.25■□□□□ 0.03
SMARCA4-202ENST00000413806 RPGRIP1Q96KN7 1286 aa15.25■□□□□ 0.03
SMARCA4-202ENST00000413806 VCX3BQ9H321 246 aa15.25■□□□□ 0.03
SMARCA4-202ENST00000413806 ADCY9O60503 1353 aa15.25■□□□□ 0.03
SMARCA4-202ENST00000413806 DNAJC10Q8IXB1 793 aa15.25■□□□□ 0.03
SMARCA4-202ENST00000413806 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.25■□□□□ 0.031e-10■■□□□ 14.3
SMARCA4-202ENST00000413806 ZBTB21Q9ULJ3 1066 aa15.25■□□□□ 0.03
SMARCA4-202ENST00000413806 TPCN1Q9ULQ1 816 aa15.25■□□□□ 0.03
SMARCA4-202ENST00000413806 UTP11Q9Y3A2 253 aaKnown RBP15.25■□□□□ 0.03
SMARCA4-202ENST00000413806 KIAA1524Q8TCG1 905 aa15.25■□□□□ 0.03
SMARCA4-202ENST00000413806 EAF2Q96CJ1 260 aaPredicted RBP15.25■□□□□ 0.03
SMARCA4-202ENST00000413806 XPO4Q9C0E2 1151 aaKnown RBP15.25■□□□□ 0.03
SMARCA4-202ENST00000413806 CCNL1Q9UK58 526 aaPredicted RBP15.25■□□□□ 0.03
SMARCA4-202ENST00000413806 PALD1Q9ULE6 856 aa15.25■□□□□ 0.03
SMARCA4-202ENST00000413806 UBAP1LF5GYI3 381 aa15.24■□□□□ 0.03
SMARCA4-202ENST00000413806 RBBP5Q15291 538 aaKnown RBP15.24■□□□□ 0.03
SMARCA4-202ENST00000413806 CCDC25Q86WR0 208 aa15.24■□□□□ 0.03
SMARCA4-202ENST00000413806 SERTAD1Q9UHV2 236 aa15.24■□□□□ 0.03
SMARCA4-202ENST00000413806 BACH1O14867 736 aa15.24■□□□□ 0.03
SMARCA4-202ENST00000413806 CASQ2O14958 399 aaPredicted RBP15.24■□□□□ 0.03
SMARCA4-202ENST00000413806 SPOPO43791 374 aa15.24■□□□□ 0.03
SMARCA4-202ENST00000413806 PHKG2P15735 406 aa15.24■□□□□ 0.03
SMARCA4-202ENST00000413806 CMA1P23946 247 aa15.24■□□□□ 0.03
SMARCA4-202ENST00000413806 PDE1CQ14123 709 aaPredicted RBP15.24■□□□□ 0.03
SMARCA4-202ENST00000413806 NOSTRINQ8IVI9 506 aa15.24■□□□□ 0.03
SMARCA4-202ENST00000413806 FNBP1Q96RU3 617 aa15.24■□□□□ 0.03
SMARCA4-202ENST00000413806 NKIRAS1Q9NYS0 192 aa15.24■□□□□ 0.03
SMARCA4-202ENST00000413806 MAPK8IP1Q9UQF2 711 aa15.24■□□□□ 0.03
SMARCA4-202ENST00000413806 ABCA8O94911 1581 aa15.24■□□□□ 0.03
SMARCA4-202ENST00000413806 GNA14O95837 355 aa15.24■□□□□ 0.03
SMARCA4-202ENST00000413806 ALDH3A1P30838 453 aa15.24■□□□□ 0.03
SMARCA4-202ENST00000413806 PNOCQ13519 176 aa15.24■□□□□ 0.03
SMARCA4-202ENST00000413806 ZNF654Q8IZM8 581 aa15.24■□□□□ 0.03
SMARCA4-202ENST00000413806 SYCE1Q8N0S2 351 aa15.24■□□□□ 0.03
SMARCA4-202ENST00000413806 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.24■□□□□ 0.03
SMARCA4-202ENST00000413806 JDP2Q8WYK2 163 aa15.24■□□□□ 0.03
SMARCA4-202ENST00000413806 LSG1Q9H089 658 aaKnown RBP15.24■□□□□ 0.03
SMARCA4-202ENST00000413806 SHROOM2Q13796 1616 aa15.24■□□□□ 0.03
SMARCA4-202ENST00000413806 SAMD9LQ8IVG5 1584 aa15.24■□□□□ 0.03
SMARCA4-202ENST00000413806 PEX19P40855 299 aa15.24■□□□□ 0.03
SMARCA4-202ENST00000413806 LIN9Q5TKA1 542 aa15.24■□□□□ 0.03
SMARCA4-202ENST00000413806 PRDM15P57071 1507 aaPredicted RBP15.24■□□□□ 0.03
SMARCA4-202ENST00000413806 ZNF365Q70YC5 407 aa15.24■□□□□ 0.03
SMARCA4-202ENST00000413806 MRFAP1L1Q96HT8 127 aa15.24■□□□□ 0.03
SMARCA4-202ENST00000413806 GBP5Q96PP8 586 aa15.24■□□□□ 0.03
SMARCA4-202ENST00000413806 BAIAP2L1Q9UHR4 511 aa15.24■□□□□ 0.03
SMARCA4-202ENST00000413806 MAGEA1P43355 309 aa15.23■□□□□ 0.03
SMARCA4-202ENST00000413806 NBPF14Q5TI25 921 aa15.23■□□□□ 0.03
SMARCA4-202ENST00000413806 GOLGA5Q8TBA6 731 aa15.23■□□□□ 0.03
SMARCA4-202ENST00000413806 TBC1D22AQ8WUA7 517 aa15.23■□□□□ 0.03
SMARCA4-202ENST00000413806 FAM212AQ96EL1 285 aa15.23■□□□□ 0.03
SMARCA4-202ENST00000413806 CABS1Q96KC9 395 aa15.23■□□□□ 0.03
SMARCA4-202ENST00000413806 DNM3Q9UQ16 869 aa15.23■□□□□ 0.03
SMARCA4-202ENST00000413806 RABGAP1Q9Y3P9 1069 aa15.23■□□□□ 0.03
SMARCA4-202ENST00000413806 KRT5P13647 590 aa15.23■□□□□ 0.03
SMARCA4-202ENST00000413806 CCDC63Q8NA47 563 aa15.23■□□□□ 0.03
SMARCA4-202ENST00000413806 SSX2IPQ9Y2D8 614 aa15.23■□□□□ 0.03
SMARCA4-202ENST00000413806 ARHGEF35A5YM69 484 aa15.23■□□□□ 0.03
SMARCA4-202ENST00000413806 HSPD1P10809 573 aaKnown RBP15.23■□□□□ 0.03
SMARCA4-202ENST00000413806 TPD52P55327 224 aaPredicted RBP15.23■□□□□ 0.03
SMARCA4-202ENST00000413806 SH2D4BQ5SQS7 431 aa15.23■□□□□ 0.03
SMARCA4-202ENST00000413806 RBM26Q5T8P6 1007 aaKnown RBP15.23■□□□□ 0.03
SMARCA4-202ENST00000413806 NT5C3AQ9H0P0 336 aa15.23■□□□□ 0.03
SMARCA4-202ENST00000413806 GPR108Q9NPR9 543 aa15.23■□□□□ 0.03
SMARCA4-202ENST00000413806 MED23Q9ULK4 1368 aa15.23■□□□□ 0.03
SMARCA4-202ENST00000413806 CCDC14Q49A88 953 aa15.23■□□□□ 0.03
SMARCA4-202ENST00000413806 NCAPH2Q6IBW4 605 aa15.23■□□□□ 0.03
SMARCA4-202ENST00000413806 KDM6BO15054 1643 aa15.23■□□□□ 0.03
SMARCA4-202ENST00000413806 KDM3AQ9Y4C1 1321 aa15.22■□□□□ 0.03
SMARCA4-202ENST00000413806 RBM6P78332 1123 aaKnown RBP15.22■□□□□ 0.03
SMARCA4-202ENST00000413806 PAK2Q13177 524 aa15.22■□□□□ 0.03
SMARCA4-202ENST00000413806 VPS54Q9P1Q0 977 aa15.22■□□□□ 0.03
SMARCA4-202ENST00000413806 GOLGA6BA6NDN3 693 aa15.22■□□□□ 0.03
SMARCA4-202ENST00000413806 FLOT1O75955 427 aa15.22■□□□□ 0.03
SMARCA4-202ENST00000413806 SFMBT2Q5VUG0 894 aa15.22■□□□□ 0.03
SMARCA4-202ENST00000413806 GBP7Q8N8V2 638 aaPredicted RBP15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 131.4 ms