RNA–Protein interactions for RNA: ENST00000413642.7

VEGFA-207, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-207ENST00000413642 AKR1B1P15121 316 aa31.6■■■□□ 2.65
VEGFA-207ENST00000413642 CDK8P49336 464 aa31.6■■■□□ 2.65
VEGFA-207ENST00000413642 CLEC10AQ8IUN9 316 aa31.6■■■□□ 2.65
VEGFA-207ENST00000413642 DDRGK1Q96HY6 314 aa31.6■■■□□ 2.65
VEGFA-207ENST00000413642 LNPKQ9C0E8 428 aa31.6■■■□□ 2.65
VEGFA-207ENST00000413642 STAP2Q9UGK3 403 aa31.6■■■□□ 2.65
VEGFA-207ENST00000413642 A0A1W2PRG0 241 aa31.59■■■□□ 2.65
VEGFA-207ENST00000413642 GCLCP48506 637 aaPredicted RBP31.59■■■□□ 2.65
VEGFA-207ENST00000413642 PDE1AP54750 535 aa31.59■■■□□ 2.65
VEGFA-207ENST00000413642 FAM110CQ1W6H9 321 aa31.59■■■□□ 2.65
VEGFA-207ENST00000413642 SMC5Q8IY18 1101 aa31.59■■■□□ 2.65
VEGFA-207ENST00000413642 KIAA1683Q9H0B3 1180 aa31.59■■■□□ 2.65
VEGFA-207ENST00000413642 POTEEQ6S8J3 1075 aa31.58■■■□□ 2.65
VEGFA-207ENST00000413642 AMOTL1Q8IY63 956 aa31.58■■■□□ 2.65
VEGFA-207ENST00000413642 RAET1EQ8TD07 263 aa31.58■■■□□ 2.65
VEGFA-207ENST00000413642 C12orf42Q96LP6 360 aa31.58■■■□□ 2.65
VEGFA-207ENST00000413642 EPB41L4AQ9HCS5 686 aaPredicted RBP31.58■■■□□ 2.65
VEGFA-207ENST00000413642 TNPO2O14787 897 aaKnown RBP31.57■■■□□ 2.64
VEGFA-207ENST00000413642 HERVK_113P62684 666 aa31.57■■■□□ 2.64
VEGFA-207ENST00000413642 IRX6P78412 446 aaPredicted RBP31.57■■■□□ 2.64
VEGFA-207ENST00000413642 C16orf86Q6ZW13 317 aa31.57■■■□□ 2.64
VEGFA-207ENST00000413642 NBPF11Q86T75 865 aa31.57■■■□□ 2.64
VEGFA-207ENST00000413642 STK11IPQ8N1F8 1099 aa31.57■■■□□ 2.64
VEGFA-207ENST00000413642 TXNRD2Q9NNW7 524 aa31.57■■■□□ 2.64
VEGFA-207ENST00000413642 MYH7P12883 1935 aa31.57■■■□□ 2.64
VEGFA-207ENST00000413642 HTTP42858 3142 aa31.57■■■□□ 2.64
VEGFA-207ENST00000413642 SIAH1Q8IUQ4 282 aa31.56■■■□□ 2.64
VEGFA-207ENST00000413642 FLT3LGP49771 235 aa31.55■■■□□ 2.64
VEGFA-207ENST00000413642 USP14P54578 494 aa31.55■■■□□ 2.64
VEGFA-207ENST00000413642 ZMYM1Q5SVZ6 1142 aa31.55■■■□□ 2.64
VEGFA-207ENST00000413642 TMEM179Q6ZVK1 233 aa31.55■■■□□ 2.64
VEGFA-207ENST00000413642 RBPJLQ9UBG7 517 aa31.55■■■□□ 2.64
VEGFA-207ENST00000413642 ARPP21Q9UBL0 812 aaPredicted RBP31.55■■■□□ 2.64
VEGFA-207ENST00000413642 MINDY4BA8MYZ0 360 aa31.54■■■□□ 2.64
VEGFA-207ENST00000413642 VCAM1P19320 739 aa31.54■■■□□ 2.64
VEGFA-207ENST00000413642 LRRFIP1Q32MZ4 808 aaKnown RBP31.54■■■□□ 2.64
VEGFA-207ENST00000413642 MORF4L1Q9UBU8 362 aa31.54■■■□□ 2.64
VEGFA-207ENST00000413642 BAZ2AQ9UIF9 1905 aaKnown RBP31.53■■■□□ 2.64
VEGFA-207ENST00000413642 APPP05067 770 aa31.53■■■□□ 2.64
VEGFA-207ENST00000413642 EN2P19622 333 aaPredicted RBP31.53■■■□□ 2.64
VEGFA-207ENST00000413642 GRK4P32298 578 aa31.53■■■□□ 2.64
VEGFA-207ENST00000413642 SBK1Q52WX2 424 aa31.53■■■□□ 2.64
VEGFA-207ENST00000413642 TAOK2Q9UL54 1235 aa31.53■■■□□ 2.64
VEGFA-207ENST00000413642 USP17L15C9J2P7 530 aa31.52■■■□□ 2.64
VEGFA-207ENST00000413642 USP17L13C9JLJ4 530 aa31.52■■■□□ 2.64
VEGFA-207ENST00000413642 USP17L11C9JVI0 530 aa31.52■■■□□ 2.64
VEGFA-207ENST00000413642 USP17L18D6R9N7 530 aa31.52■■■□□ 2.64
VEGFA-207ENST00000413642 USP17L22D6RA61 530 aa31.52■■■□□ 2.64
VEGFA-207ENST00000413642 USP17L17D6RBQ6 530 aa31.52■■■□□ 2.64
VEGFA-207ENST00000413642 USP17L19D6RCP7 530 aa31.52■■■□□ 2.64
VEGFA-207ENST00000413642 USP17L20D6RJB6 530 aa31.52■■■□□ 2.64
VEGFA-207ENST00000413642 USP17L24Q0WX57 530 aa31.52■■■□□ 2.64
VEGFA-207ENST00000413642 MTFR1Q15390 333 aa31.52■■■□□ 2.64
VEGFA-207ENST00000413642 Q3C1V9 767 aa31.52■■■□□ 2.64
VEGFA-207ENST00000413642 KIAA1755Q5JYT7 1200 aa31.52■■■□□ 2.64
VEGFA-207ENST00000413642 GIMAP6Q6P9H5 292 aa31.52■■■□□ 2.64
VEGFA-207ENST00000413642 CCDC129Q6ZRS4 1044 aa31.52■■■□□ 2.64
VEGFA-207ENST00000413642 CCDC17Q96LX7 622 aa31.52■■■□□ 2.64
VEGFA-207ENST00000413642 PATL2C9JE40 543 aaKnown RBP31.51■■■□□ 2.63
VEGFA-207ENST00000413642 CATSPERGQ6ZRH7 1159 aa31.51■■■□□ 2.63
VEGFA-207ENST00000413642 EVI5LQ96CN4 794 aa31.51■■■□□ 2.63
VEGFA-207ENST00000413642 PAGR1Q9BTK6 254 aa31.51■■■□□ 2.63
VEGFA-207ENST00000413642 TMEM106CQ9BVX2 250 aa31.51■■■□□ 2.63
VEGFA-207ENST00000413642 RPAP3Q9H6T3 665 aaPredicted RBP31.51■■■□□ 2.63
VEGFA-207ENST00000413642 GNAT2P19087 354 aa31.5■■■□□ 2.63
VEGFA-207ENST00000413642 TDO2P48775 406 aa31.5■■■□□ 2.63
VEGFA-207ENST00000413642 CHD1LQ86WJ1 897 aa31.5■■■□□ 2.63
VEGFA-207ENST00000413642 IFNL3Q8IZI9 196 aa31.5■■■□□ 2.63
VEGFA-207ENST00000413642 GPRC5AQ8NFJ5 357 aa31.5■■■□□ 2.63
VEGFA-207ENST00000413642 COA7Q96BR5 231 aa31.5■■■□□ 2.63
VEGFA-207ENST00000413642 ELNP15502 786 aa31.49■■■□□ 2.63
VEGFA-207ENST00000413642 NUCB1Q02818 461 aa31.49■■■□□ 2.63
VEGFA-207ENST00000413642 ICA1Q05084 483 aa31.49■■■□□ 2.63
VEGFA-207ENST00000413642 ADCY3O60266 1144 aa31.48■■■□□ 2.63
VEGFA-207ENST00000413642 GNL3Q9BVP2 549 aaKnown RBP eCLIP31.48■■■□□ 2.63
VEGFA-207ENST00000413642 BIN2Q9UBW5 565 aaPredicted RBP31.48■■■□□ 2.63
VEGFA-207ENST00000413642 CNMDO75829 334 aa31.47■■■□□ 2.63
VEGFA-207ENST00000413642 RASA1P20936 1047 aa31.47■■■□□ 2.63
VEGFA-207ENST00000413642 GJD2Q9UKL4 321 aa31.47■■■□□ 2.63
VEGFA-207ENST00000413642 FOXP2O15409 715 aa31.46■■■□□ 2.63
VEGFA-207ENST00000413642 EEF2P13639 858 aaKnown RBP31.46■■■□□ 2.63
VEGFA-207ENST00000413642 ERVK-9P63128 1117 aa31.46■■■□□ 2.63
VEGFA-207ENST00000413642 ERVK-24P63145 666 aa31.46■■■□□ 2.63
VEGFA-207ENST00000413642 ATP2B2Q01814 1243 aa31.46■■■□□ 2.63
VEGFA-207ENST00000413642 PLEKHM2Q8IWE5 1019 aa31.46■■■□□ 2.63
VEGFA-207ENST00000413642 PORCNQ9H237 461 aa31.46■■■□□ 2.63
VEGFA-207ENST00000413642 TMX2Q9Y320 296 aa31.46■■■□□ 2.63
VEGFA-207ENST00000413642 PRDM1O75626 825 aa31.45■■■□□ 2.63
VEGFA-207ENST00000413642 IRF5Q13568 498 aa31.45■■■□□ 2.63
VEGFA-207ENST00000413642 SPICE1Q8N0Z3 855 aa31.45■■■□□ 2.63
VEGFA-207ENST00000413642 SLAIN1Q8ND83 568 aa31.45■■■□□ 2.63
VEGFA-207ENST00000413642 MKNK2Q9HBH9 465 aa31.45■■■□□ 2.63
VEGFA-207ENST00000413642 ARHGEF10LQ9HCE6 1279 aa31.45■■■□□ 2.63
VEGFA-207ENST00000413642 ROBO3Q96MS0 1386 aa31.44■■■□□ 2.62
VEGFA-207ENST00000413642 MGAMO43451 1857 aa31.44■■■□□ 2.62
VEGFA-207ENST00000413642 FAM227BQ96M60 508 aa31.44■■■□□ 2.62
VEGFA-207ENST00000413642 SPDYE16A6NNV3 312 aaPredicted RBP31.43■■■□□ 2.62
VEGFA-207ENST00000413642 VPS53Q5VIR6 699 aa31.43■■■□□ 2.62
VEGFA-207ENST00000413642 GTF3C2Q8WUA4 911 aaPredicted RBP31.43■■■□□ 2.62
VEGFA-207ENST00000413642 NACAP1Q9BZK3 213 aa31.43■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms