RNA–Protein interactions for RNA: ENST00000411767.6

PTPN13-202, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-202ENST00000411767 ZNF277Q9NRM2 450 aaPredicted RBP5.05□□□□□ -1.6
PTPN13-202ENST00000411767 GGA1Q9UJY5 639 aa5.05□□□□□ -1.6
PTPN13-202ENST00000411767 ACTN4O43707 911 aaKnown RBP5.05□□□□□ -1.6
PTPN13-202ENST00000411767 CAVIN2O95810 425 aa5.05□□□□□ -1.6
PTPN13-202ENST00000411767 GPR1P46091 355 aa5.05□□□□□ -1.6
PTPN13-202ENST00000411767 NLRP6P59044 892 aa5.05□□□□□ -1.6
PTPN13-202ENST00000411767 RNASELQ05823 741 aaKnown RBP5.05□□□□□ -1.6
PTPN13-202ENST00000411767 SLC44A4Q53GD3 710 aa5.05□□□□□ -1.6
PTPN13-202ENST00000411767 HHATQ5VTY9 493 aa5.05□□□□□ -1.6
PTPN13-202ENST00000411767 FBXL13Q8NEE6 735 aa5.05□□□□□ -1.6
PTPN13-202ENST00000411767 SIKE1Q9BRV8 207 aa5.05□□□□□ -1.6
PTPN13-202ENST00000411767 LSM14BQ9BX40 385 aaKnown RBP5.05□□□□□ -1.6
PTPN13-202ENST00000411767 C10orf88Q9H8K7 445 aa5.05□□□□□ -1.6
PTPN13-202ENST00000411767 RAD18Q9NS91 495 aa5.05□□□□□ -1.6
PTPN13-202ENST00000411767 TMOD4Q9NZQ9 345 aa5.05□□□□□ -1.6
PTPN13-202ENST00000411767 SMIM23A6NLE4 172 aa5.05□□□□□ -1.6
PTPN13-202ENST00000411767 IDH3BO43837 385 aa5.05□□□□□ -1.6
PTPN13-202ENST00000411767 PHACTR2O75167 634 aa5.05□□□□□ -1.6
PTPN13-202ENST00000411767 MMEP08473 750 aa5.05□□□□□ -1.6
PTPN13-202ENST00000411767 DEFA1P59665 94 aa5.05□□□□□ -1.6
PTPN13-202ENST00000411767 DEFA3P59666 94 aa5.05□□□□□ -1.6
PTPN13-202ENST00000411767 PTK2BQ14289 1009 aa5.05□□□□□ -1.6
PTPN13-202ENST00000411767 CYP26C1Q6V0L0 522 aa5.05□□□□□ -1.6
PTPN13-202ENST00000411767 NME8Q8N427 588 aa5.05□□□□□ -1.6
PTPN13-202ENST00000411767 DENND6BQ8NEG7 585 aa5.05□□□□□ -1.6
PTPN13-202ENST00000411767 MDM1Q8TC05 714 aa5.05□□□□□ -1.6
PTPN13-202ENST00000411767 MPP4Q96JB8 637 aa5.05□□□□□ -1.6
PTPN13-202ENST00000411767 RPS6KC1Q96S38 1066 aa5.05□□□□□ -1.6
PTPN13-202ENST00000411767 COQ7Q99807 217 aa5.05□□□□□ -1.6
PTPN13-202ENST00000411767 ATP6V0A2Q9Y487 856 aa5.05□□□□□ -1.6
PTPN13-202ENST00000411767 RRBP1Q9P2E9 1410 aaKnown RBP5.05□□□□□ -1.6
PTPN13-202ENST00000411767 WDR47O94967 919 aa5.05□□□□□ -1.6
PTPN13-202ENST00000411767 MFN2O95140 757 aa5.05□□□□□ -1.6
PTPN13-202ENST00000411767 LMNB1P20700 586 aa5.05□□□□□ -1.6
PTPN13-202ENST00000411767 TMED10P49755 219 aaKnown RBP5.05□□□□□ -1.6
PTPN13-202ENST00000411767 CBFBQ13951 182 aa5.05□□□□□ -1.6
PTPN13-202ENST00000411767 EFR3AQ14156 821 aa5.05□□□□□ -1.6
PTPN13-202ENST00000411767 ZKSCAN8Q15776 578 aaPredicted RBP5.05□□□□□ -1.6
PTPN13-202ENST00000411767 SPAG16Q8N0X2 631 aa5.05□□□□□ -1.6
PTPN13-202ENST00000411767 ZFP42Q96MM3 310 aa5.05□□□□□ -1.6
PTPN13-202ENST00000411767 OLFML3Q9NRN5 406 aa5.05□□□□□ -1.6
PTPN13-202ENST00000411767 RMND1Q9NWS8 449 aa5.05□□□□□ -1.6
PTPN13-202ENST00000411767 NDE1Q9NXR1 346 aa5.05□□□□□ -1.6
PTPN13-202ENST00000411767 EEA1Q15075 1411 aa5.05□□□□□ -1.6
PTPN13-202ENST00000411767 GOLGA8IPA6NC78 632 aa5.05□□□□□ -1.6
PTPN13-202ENST00000411767 CDC45O75419 566 aa5.05□□□□□ -1.6
PTPN13-202ENST00000411767 TRIM16O95361 564 aa5.05□□□□□ -1.6
PTPN13-202ENST00000411767 MAPK1P28482 360 aa5.05□□□□□ -1.6
PTPN13-202ENST00000411767 S100GP29377 79 aa5.05□□□□□ -1.6
PTPN13-202ENST00000411767 IST1P53990 364 aa5.05□□□□□ -1.6
PTPN13-202ENST00000411767 SPAG1Q07617 926 aa5.05□□□□□ -1.6
PTPN13-202ENST00000411767 TEFQ10587 303 aa5.05□□□□□ -1.6
PTPN13-202ENST00000411767 EIF2B5Q13144 721 aaKnown RBP5.05□□□□□ -1.6
PTPN13-202ENST00000411767 TJAP1Q5JTD0 557 aa5.05□□□□□ -1.6
PTPN13-202ENST00000411767 ISM2Q6H9L7 571 aa5.05□□□□□ -1.6
PTPN13-202ENST00000411767 RAB44Q7Z6P3 723 aaPredicted RBP5.05□□□□□ -1.6
PTPN13-202ENST00000411767 DIS3LQ8TF46 1054 aaKnown RBP5.05□□□□□ -1.6
PTPN13-202ENST00000411767 FBXO41Q8TF61 875 aa5.05□□□□□ -1.6
PTPN13-202ENST00000411767 TADA1Q96BN2 335 aa5.05□□□□□ -1.6
PTPN13-202ENST00000411767 NAF1Q96HR8 494 aaKnown RBP5.05□□□□□ -1.6
PTPN13-202ENST00000411767 THUMPD2Q9BTF0 503 aaKnown RBP5.05□□□□□ -1.6
PTPN13-202ENST00000411767 TAF4O00268 1085 aa5.04□□□□□ -1.6
PTPN13-202ENST00000411767 GUCY1B2O75343 617 aa5.04□□□□□ -1.6
PTPN13-202ENST00000411767 USP5P45974 858 aa5.04□□□□□ -1.6
PTPN13-202ENST00000411767 ATXN3P54252 364 aaPredicted RBP5.04□□□□□ -1.6
PTPN13-202ENST00000411767 CWF19L2Q2TBE0 894 aaKnown RBP5.04□□□□□ -1.6
PTPN13-202ENST00000411767 ANO6Q4KMQ2 910 aa5.04□□□□□ -1.6
PTPN13-202ENST00000411767 RUNDC3AQ59EK9 446 aa5.04□□□□□ -1.6
PTPN13-202ENST00000411767 FAM81AQ8TBF8 368 aa5.04□□□□□ -1.6
PTPN13-202ENST00000411767 TACO1Q9BSH4 297 aaKnown RBP5.04□□□□□ -1.6
PTPN13-202ENST00000411767 DISC1Q9NRI5 854 aa5.04□□□□□ -1.6
PTPN13-202ENST00000411767 ABCF3Q9NUQ8 709 aa5.04□□□□□ -1.6
PTPN13-202ENST00000411767 EMC3Q9P0I2 261 aa5.04□□□□□ -1.6
PTPN13-202ENST00000411767 DDX41Q9UJV9 622 aaKnown RBP5.04□□□□□ -1.6
PTPN13-202ENST00000411767 FHAD1B1AJZ9 1412 aa5.04□□□□□ -1.6
PTPN13-202ENST00000411767 CLASP2O75122 1294 aaKnown RBP5.04□□□□□ -1.6
PTPN13-202ENST00000411767 RGS20O76081 388 aa5.04□□□□□ -1.6
PTPN13-202ENST00000411767 CCNB2O95067 398 aa5.04□□□□□ -1.6
PTPN13-202ENST00000411767 EEF2P13639 858 aaKnown RBP5.04□□□□□ -1.6
PTPN13-202ENST00000411767 MX1P20591 662 aa5.04□□□□□ -1.6
PTPN13-202ENST00000411767 ABCD1P33897 745 aa5.04□□□□□ -1.6
PTPN13-202ENST00000411767 PMS2P54278 862 aa5.04□□□□□ -1.6
PTPN13-202ENST00000411767 SLC9C1Q4G0N8 1177 aa5.04□□□□□ -1.6
PTPN13-202ENST00000411767 RINLQ6ZS11 566 aa5.04□□□□□ -1.6
PTPN13-202ENST00000411767 IKBIPQ70UQ0 350 aa5.04□□□□□ -1.6
PTPN13-202ENST00000411767 HSPH1Q92598 858 aa5.04□□□□□ -1.6
PTPN13-202ENST00000411767 ZBTB39O15060 712 aa5.04□□□□□ -1.6
PTPN13-202ENST00000411767 TTI1O43156 1089 aa5.04□□□□□ -1.6
PTPN13-202ENST00000411767 PLIN1O60240 522 aa5.04□□□□□ -1.6
PTPN13-202ENST00000411767 SMARCA5O60264 1052 aaPredicted RBP5.04□□□□□ -1.6
PTPN13-202ENST00000411767 GRK2P25098 689 aa5.04□□□□□ -1.6
PTPN13-202ENST00000411767 MMEL1Q495T6 779 aa5.04□□□□□ -1.6
PTPN13-202ENST00000411767 PPP4R3BQ5MIZ7 849 aa5.04□□□□□ -1.6
PTPN13-202ENST00000411767 NBPF10Q6P3W6 841 aaKnown RBP5.04□□□□□ -1.6
PTPN13-202ENST00000411767 MMS22LQ6ZRQ5 1243 aa5.04□□□□□ -1.6
PTPN13-202ENST00000411767 USP51Q70EK9 711 aa5.04□□□□□ -1.6
PTPN13-202ENST00000411767 TMEM245Q9H330 911 aa5.04□□□□□ -1.6
PTPN13-202ENST00000411767 CEP126Q9P2H0 1117 aa5.04□□□□□ -1.6
PTPN13-202ENST00000411767 UTP11Q9Y3A2 253 aaKnown RBP5.04□□□□□ -1.6
PTPN13-202ENST00000411767 EVC2Q86UK5 1308 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms