RNA–Protein interactions for RNA: ENST00000410731.1

RNU4-55P-201, Transcript of RNA, U4 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU4-55P, Length 137 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-55P-201ENST00000410731 GREM1O60565 184 aa5.96□□□□□ -1.46
RNU4-55P-201ENST00000410731 PAPLNO95428 1278 aa5.96□□□□□ -1.46
RNU4-55P-201ENST00000410731 CBX7O95931 251 aa5.96□□□□□ -1.46
RNU4-55P-201ENST00000410731 CWF19L2Q2TBE0 894 aaKnown RBP5.96□□□□□ -1.46
RNU4-55P-201ENST00000410731 ATG4DQ86TL0 474 aaPredicted RBP5.96□□□□□ -1.46
RNU4-55P-201ENST00000410731 LRRN4CLQ8ND94 238 aa5.96□□□□□ -1.46
RNU4-55P-201ENST00000410731 PIWIL2Q8TC59 973 aaKnown RBP5.96□□□□□ -1.46
RNU4-55P-201ENST00000410731 LMCD1Q9NZU5 365 aa5.96□□□□□ -1.46
RNU4-55P-201ENST00000410731 RNF114Q9Y508 228 aa5.96□□□□□ -1.46
RNU4-55P-201ENST00000410731 UPK3BL1B0FP48 263 aa5.95□□□□□ -1.46
RNU4-55P-201ENST00000410731 UPK3BL2E5RIL1 263 aa5.95□□□□□ -1.46
RNU4-55P-201ENST00000410731 H3BS24 57 aa5.95□□□□□ -1.46
RNU4-55P-201ENST00000410731 BIN1O00499 593 aa5.95□□□□□ -1.46
RNU4-55P-201ENST00000410731 TLR3O15455 904 aaKnown RBP5.95□□□□□ -1.46
RNU4-55P-201ENST00000410731 ZP2Q05996 745 aa5.95□□□□□ -1.46
RNU4-55P-201ENST00000410731 TNK2Q07912 1038 aa5.95□□□□□ -1.46
RNU4-55P-201ENST00000410731 CDKAL1Q5VV42 579 aa5.95□□□□□ -1.46
RNU4-55P-201ENST00000410731 ZNF296Q8WUU4 475 aaPredicted RBP5.95□□□□□ -1.46
RNU4-55P-201ENST00000410731 ASIC4Q96FT7 647 aa5.95□□□□□ -1.46
RNU4-55P-201ENST00000410731 ATP13A1Q9HD20 1204 aa5.95□□□□□ -1.46
RNU4-55P-201ENST00000410731 KLHL3Q9UH77 587 aa5.95□□□□□ -1.46
RNU4-55P-201ENST00000410731 ADAMTS1Q9UHI8 967 aa5.95□□□□□ -1.46
RNU4-55P-201ENST00000410731 DNAJA2O60884 412 aa5.94□□□□□ -1.46
RNU4-55P-201ENST00000410731 CRKP46108 304 aa5.94□□□□□ -1.46
RNU4-55P-201ENST00000410731 TMEM87AQ8NBN3 555 aa5.94□□□□□ -1.46
RNU4-55P-201ENST00000410731 FLAD1Q8NFF5 587 aa5.94□□□□□ -1.46
RNU4-55P-201ENST00000410731 RNF141Q8WVD5 230 aa5.94□□□□□ -1.46
RNU4-55P-201ENST00000410731 Q96M66 194 aa5.94□□□□□ -1.46
RNU4-55P-201ENST00000410731 METTL5Q9NRN9 209 aaKnown RBP5.94□□□□□ -1.46
RNU4-55P-201ENST00000410731 CHURC1-FNTBB4DL54 471 aa5.93□□□□□ -1.46
RNU4-55P-201ENST00000410731 ATE1O95260 518 aa5.93□□□□□ -1.46
RNU4-55P-201ENST00000410731 ZNF76P36508 570 aa5.93□□□□□ -1.46
RNU4-55P-201ENST00000410731 TXKP42681 527 aa5.93□□□□□ -1.46
RNU4-55P-201ENST00000410731 MLECQ14165 292 aa5.93□□□□□ -1.46
RNU4-55P-201ENST00000410731 CCDC74BQ96LY2 380 aa5.93□□□□□ -1.46
RNU4-55P-201ENST00000410731 KRTAP4-12Q9BQ66 201 aa5.93□□□□□ -1.46
RNU4-55P-201ENST00000410731 BACH2Q9BYV9 841 aa5.93□□□□□ -1.46
RNU4-55P-201ENST00000410731 CARS2Q9HA77 564 aaKnown RBP5.93□□□□□ -1.46
RNU4-55P-201ENST00000410731 BRMS1Q9HCU9 246 aa5.93□□□□□ -1.46
RNU4-55P-201ENST00000410731 PRDM7Q9NQW5 492 aa5.93□□□□□ -1.46
RNU4-55P-201ENST00000410731 VAMP1P23763 118 aa5.92□□□□□ -1.46
RNU4-55P-201ENST00000410731 FANCCQ00597 558 aa5.92□□□□□ -1.46
RNU4-55P-201ENST00000410731 TMPRSS7Q7RTY8 843 aa5.92□□□□□ -1.46
RNU4-55P-201ENST00000410731 PHACTR4Q8IZ21 702 aa5.92□□□□□ -1.46
RNU4-55P-201ENST00000410731 DTWD2Q8NBA8 298 aa5.92□□□□□ -1.46
RNU4-55P-201ENST00000410731 UBE2FQ969M7 185 aa5.92□□□□□ -1.46
RNU4-55P-201ENST00000410731 ASPNQ9BXN1 380 aa5.92□□□□□ -1.46
RNU4-55P-201ENST00000410731 EHMT1Q9H9B1 1298 aa5.92□□□□□ -1.46
RNU4-55P-201ENST00000410731 UBP1Q9NZI7 540 aa5.92□□□□□ -1.46
RNU4-55P-201ENST00000410731 GMIPQ9P107 970 aa5.92□□□□□ -1.46
RNU4-55P-201ENST00000410731 PCDHB14Q9Y5E9 798 aa5.92□□□□□ -1.46
RNU4-55P-201ENST00000410731 RBAK-RBAKDNI3L0D1 243 aa5.91□□□□□ -1.46
RNU4-55P-201ENST00000410731 TNNI2P48788 182 aa5.91□□□□□ -1.46
RNU4-55P-201ENST00000410731 APOBRQ0VD83 1088 aa5.91□□□□□ -1.46
RNU4-55P-201ENST00000410731 KIAA0825Q8IV33 1275 aa5.91□□□□□ -1.46
RNU4-55P-201ENST00000410731 REXO1Q8N1G1 1221 aaKnown RBP5.91□□□□□ -1.46
RNU4-55P-201ENST00000410731 BAHD1Q8TBE0 780 aaPredicted RBP5.91□□□□□ -1.46
RNU4-55P-201ENST00000410731 KREMEN1Q96MU8 473 aa5.91□□□□□ -1.46
RNU4-55P-201ENST00000410731 NT5C1AQ9BXI3 368 aa5.91□□□□□ -1.46
RNU4-55P-201ENST00000410731 GPR62Q9BZJ7 368 aa5.91□□□□□ -1.46
RNU4-55P-201ENST00000410731 TRIT1Q9H3H1 467 aaKnown RBP5.91□□□□□ -1.46
RNU4-55P-201ENST00000410731 ZSWIM5Q9P217 1185 aa5.91□□□□□ -1.46
RNU4-55P-201ENST00000410731 KCNH3Q9ULD8 1083 aa5.91□□□□□ -1.46
RNU4-55P-201ENST00000410731 CTNND2Q9UQB3 1225 aa5.91□□□□□ -1.46
RNU4-55P-201ENST00000410731 SLC22A31A6NKX4 558 aa5.9□□□□□ -1.46
RNU4-55P-201ENST00000410731 RGS13O14921 159 aa5.9□□□□□ -1.46
RNU4-55P-201ENST00000410731 RECKO95980 971 aa5.9□□□□□ -1.46
RNU4-55P-201ENST00000410731 SRFP11831 508 aa5.9□□□□□ -1.46
RNU4-55P-201ENST00000410731 TRIM26Q12899 539 aaPredicted RBP5.9□□□□□ -1.46
RNU4-55P-201ENST00000410731 GAB4Q2WGN9 574 aa5.9□□□□□ -1.46
RNU4-55P-201ENST00000410731 SEZ6Q53EL9 994 aa5.9□□□□□ -1.46
RNU4-55P-201ENST00000410731 OVOS1Q6IE37 1185 aa5.9□□□□□ -1.46
RNU4-55P-201ENST00000410731 USP48Q86UV5 1035 aa5.9□□□□□ -1.46
RNU4-55P-201ENST00000410731 SLITRK4Q8IW52 837 aa5.9□□□□□ -1.46
RNU4-55P-201ENST00000410731 KIF2CQ99661 725 aa5.9□□□□□ -1.46
RNU4-55P-201ENST00000410731 SPON2Q9BUD6 331 aa5.9□□□□□ -1.46
RNU4-55P-201ENST00000410731 DUSP15Q9H1R2 295 aaPredicted RBP5.9□□□□□ -1.46
RNU4-55P-201ENST00000410731 CARMIL2Q6F5E8 1435 aa5.9□□□□□ -1.47
RNU4-55P-201ENST00000410731 ESR1P03372 595 aa5.89□□□□□ -1.47
RNU4-55P-201ENST00000410731 RAG1P15918 1043 aa5.89□□□□□ -1.47
RNU4-55P-201ENST00000410731 ARSHQ5FYA8 562 aa5.89□□□□□ -1.47
RNU4-55P-201ENST00000410731 FAM168AQ92567 244 aa5.89□□□□□ -1.47
RNU4-55P-201ENST00000410731 NKD1Q969G9 470 aa5.89□□□□□ -1.47
RNU4-55P-201ENST00000410731 CCDC120Q96HB5 630 aa5.89□□□□□ -1.47
RNU4-55P-201ENST00000410731 EAF1Q96JC9 268 aaPredicted RBP5.89□□□□□ -1.47
RNU4-55P-201ENST00000410731 GPATCH2Q9NW75 528 aa5.89□□□□□ -1.47
RNU4-55P-201ENST00000410731 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.89□□□□□ -1.47
RNU4-55P-201ENST00000410731 MEIS3P2A8K0S8 358 aa5.88□□□□□ -1.47
RNU4-55P-201ENST00000410731 UBOX5O94941 541 aa5.88□□□□□ -1.47
RNU4-55P-201ENST00000410731 TPP2P29144 1249 aaPredicted RBP5.88□□□□□ -1.47
RNU4-55P-201ENST00000410731 GBP1P32455 592 aa5.88□□□□□ -1.47
RNU4-55P-201ENST00000410731 GDNFP39905 211 aa5.88□□□□□ -1.47
RNU4-55P-201ENST00000410731 ZNF165P49910 485 aa5.88□□□□□ -1.47
RNU4-55P-201ENST00000410731 RNF4P78317 190 aa5.88□□□□□ -1.47
RNU4-55P-201ENST00000410731 CLCQ05315 142 aa5.88□□□□□ -1.47
RNU4-55P-201ENST00000410731 CDCP2Q5VXM1 449 aa5.88□□□□□ -1.47
RNU4-55P-201ENST00000410731 GK5Q6ZS86 529 aa5.88□□□□□ -1.47
RNU4-55P-201ENST00000410731 TSPYL5Q86VY4 417 aaPredicted RBP5.88□□□□□ -1.47
RNU4-55P-201ENST00000410731 RNF34Q969K3 372 aa5.88□□□□□ -1.47
RNU4-55P-201ENST00000410731 VWCEQ96DN2 955 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms