RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 SPOCD1Q6ZMY3 1216 aa7.42□□□□□ -1.22
CLK1-203ENST00000409769 ZSCAN18Q8TBC5 510 aaPredicted RBP7.42□□□□□ -1.22
CLK1-203ENST00000409769 TMEM87BQ96K49 555 aa7.42□□□□□ -1.22
CLK1-203ENST00000409769 NOC4LQ9BVI4 516 aaKnown RBP7.42□□□□□ -1.22
CLK1-203ENST00000409769 ZSWIM5Q9P217 1185 aa7.42□□□□□ -1.22
CLK1-203ENST00000409769 PCDHB5Q9Y5E4 795 aa7.42□□□□□ -1.22
CLK1-203ENST00000409769 CNTNAP4Q9C0A0 1308 aa7.42□□□□□ -1.22
CLK1-203ENST00000409769 RBM47A0AV96 593 aaKnown RBP7.41□□□□□ -1.22
CLK1-203ENST00000409769 CDK8P49336 464 aa7.41□□□□□ -1.22
CLK1-203ENST00000409769 ST13P50502 369 aaKnown RBP7.41□□□□□ -1.22
CLK1-203ENST00000409769 TAGLNQ01995 201 aaKnown RBP7.41□□□□□ -1.22
CLK1-203ENST00000409769 TNK2Q07912 1038 aa7.41□□□□□ -1.22
CLK1-203ENST00000409769 PSMD2Q13200 908 aa7.41□□□□□ -1.22
CLK1-203ENST00000409769 CCDC84Q86UT8 332 aaPredicted RBP7.41□□□□□ -1.22
CLK1-203ENST00000409769 MCATQ8IVS2 390 aaKnown RBP7.41□□□□□ -1.22
CLK1-203ENST00000409769 FBXO15Q8NCQ5 510 aaPredicted RBP7.41□□□□□ -1.22
CLK1-203ENST00000409769 XAGE3Q8WTP9 111 aa7.41□□□□□ -1.22
CLK1-203ENST00000409769 KRTAP4-7Q9BYR0 210 aa7.41□□□□□ -1.22
CLK1-203ENST00000409769 RNF19AQ9NV58 838 aa7.41□□□□□ -1.22
CLK1-203ENST00000409769 TJP2Q9UDY2 1190 aa7.41□□□□□ -1.22
CLK1-203ENST00000409769 SYDE1Q6ZW31 735 aaPredicted RBP7.4□□□□□ -1.22
CLK1-203ENST00000409769 CDH24Q86UP0 819 aa7.4□□□□□ -1.22
CLK1-203ENST00000409769 ANKLE2Q86XL3 938 aa7.4□□□□□ -1.22
CLK1-203ENST00000409769 TMEM59LQ9UK28 342 aa7.4□□□□□ -1.22
CLK1-203ENST00000409769 SORBS3O60504 671 aa7.39□□□□□ -1.23
CLK1-203ENST00000409769 ZNF16P17020 682 aaPredicted RBP7.39□□□□□ -1.23
CLK1-203ENST00000409769 PRR23BQ6ZRT6 265 aa7.39□□□□□ -1.23
CLK1-203ENST00000409769 RGS22Q8NE09 1264 aa7.39□□□□□ -1.23
CLK1-203ENST00000409769 ABHD4Q8TB40 342 aa7.39□□□□□ -1.23
CLK1-203ENST00000409769 GIPC2Q8TF65 315 aa7.39□□□□□ -1.23
CLK1-203ENST00000409769 SLAMF8Q9P0V8 285 aa7.39□□□□□ -1.23
CLK1-203ENST00000409769 CEP131Q9UPN4 1083 aa7.39□□□□□ -1.23
CLK1-203ENST00000409769 CCDC9Q9Y3X0 531 aaKnown RBP7.39□□□□□ -1.23
CLK1-203ENST00000409769 NFIBO00712 420 aa7.38□□□□□ -1.23
CLK1-203ENST00000409769 TFE3P19532 575 aaPredicted RBP7.38□□□□□ -1.23
CLK1-203ENST00000409769 TAF1CQ15572 869 aaPredicted RBP7.38□□□□□ -1.23
CLK1-203ENST00000409769 TTC6Q86TZ1 520 aa7.38□□□□□ -1.23
CLK1-203ENST00000409769 SIAH1Q8IUQ4 282 aa7.38□□□□□ -1.23
CLK1-203ENST00000409769 KCNH3Q9ULD8 1083 aa7.38□□□□□ -1.23
CLK1-203ENST00000409769 ESR1P03372 595 aa7.37□□□□□ -1.23
CLK1-203ENST00000409769 CTSHP09668 335 aa7.37□□□□□ -1.23
CLK1-203ENST00000409769 YARSP54577 528 aaKnown RBP7.37□□□□□ -1.23
CLK1-203ENST00000409769 MRPL58Q14197 206 aaKnown RBP7.37□□□□□ -1.23
CLK1-203ENST00000409769 MAP3K11Q16584 847 aa7.37□□□□□ -1.23
CLK1-203ENST00000409769 CILP2Q8IUL8 1156 aa7.37□□□□□ -1.23
CLK1-203ENST00000409769 DNAJB8Q8NHS0 232 aa7.37□□□□□ -1.23
CLK1-203ENST00000409769 CYB5D2Q8WUJ1 264 aa7.37□□□□□ -1.23
CLK1-203ENST00000409769 CRELD1Q96HD1 420 aa7.37□□□□□ -1.23
CLK1-203ENST00000409769 GPR62Q9BZJ7 368 aa7.37□□□□□ -1.23
CLK1-203ENST00000409769 BCL11AQ9H165 835 aa7.37□□□□□ -1.23
CLK1-203ENST00000409769 GPATCH2Q9NW75 528 aa7.37□□□□□ -1.23
CLK1-203ENST00000409769 USP31Q70CQ4 1352 aa7.36□□□□□ -1.23
CLK1-203ENST00000409769 UNC13AQ9UPW8 1703 aa7.36□□□□□ -1.23
CLK1-203ENST00000409769 BPNT1O95861 308 aa7.36□□□□□ -1.23
CLK1-203ENST00000409769 MYLIPQ8WY64 445 aa7.36□□□□□ -1.23
CLK1-203ENST00000409769 ACSF2Q96CM8 615 aaPredicted RBP7.36□□□□□ -1.23
CLK1-203ENST00000409769 DPH2Q9BQC3 489 aaPredicted RBP7.36□□□□□ -1.23
CLK1-203ENST00000409769 EPB41L4BQ9H329 900 aa7.36□□□□□ -1.23
CLK1-203ENST00000409769 NSUN3Q9H649 340 aaKnown RBP7.36□□□□□ -1.23
CLK1-203ENST00000409769 HPXP02790 462 aa7.35□□□□□ -1.23
CLK1-203ENST00000409769 TPP2P29144 1249 aaPredicted RBP7.35□□□□□ -1.23
CLK1-203ENST00000409769 TMEM201Q5SNT2 666 aa7.35□□□□□ -1.23
CLK1-203ENST00000409769 MEI1Q5TIA1 1274 aa7.35□□□□□ -1.23
CLK1-203ENST00000409769 CREG2Q8IUH2 290 aa7.35□□□□□ -1.23
CLK1-203ENST00000409769 LILRA2Q8N149 483 aa7.35□□□□□ -1.23
CLK1-203ENST00000409769 SYTL4Q96C24 671 aaPredicted RBP7.35□□□□□ -1.23
CLK1-203ENST00000409769 Q96M66 194 aa7.35□□□□□ -1.23
CLK1-203ENST00000409769 DUSP15Q9H1R2 295 aaPredicted RBP7.35□□□□□ -1.23
CLK1-203ENST00000409769 MRS2Q9HD23 443 aa7.35□□□□□ -1.23
CLK1-203ENST00000409769 DNAJC25-GNG10A0A024R161 153 aa7.34□□□□□ -1.23
CLK1-203ENST00000409769 TMEM253P0C7T8 217 aa7.34□□□□□ -1.23
CLK1-203ENST00000409769 SRFP11831 508 aa7.34□□□□□ -1.23
CLK1-203ENST00000409769 PLCG1P19174 1290 aa7.34□□□□□ -1.23
CLK1-203ENST00000409769 VAMP1P23763 118 aa7.34□□□□□ -1.23
CLK1-203ENST00000409769 CFPP27918 469 aa7.34□□□□□ -1.23
CLK1-203ENST00000409769 GAB4Q2WGN9 574 aa7.34□□□□□ -1.23
CLK1-203ENST00000409769 LRRC56Q8IYG6 542 aaPredicted RBP7.34□□□□□ -1.23
CLK1-203ENST00000409769 PHC3Q8NDX5 983 aa7.34□□□□□ -1.23
CLK1-203ENST00000409769 FAM13CQ8NE31 585 aa7.34□□□□□ -1.23
CLK1-203ENST00000409769 PDZD8Q8NEN9 1154 aa7.34□□□□□ -1.23
CLK1-203ENST00000409769 RNF141Q8WVD5 230 aa7.34□□□□□ -1.23
CLK1-203ENST00000409769 DHX38Q92620 1227 aaKnown RBP7.34□□□□□ -1.23
CLK1-203ENST00000409769 FAM161BQ96MY7 647 aa7.34□□□□□ -1.23
CLK1-203ENST00000409769 SLC26A8Q96RN1 970 aa7.34□□□□□ -1.23
CLK1-203ENST00000409769 DIRC2Q96SL1 478 aa7.34□□□□□ -1.23
CLK1-203ENST00000409769 DCP1AQ9NPI6 582 aaPredicted RBP7.34□□□□□ -1.23
CLK1-203ENST00000409769 DUSP13Q9UII6 198 aa7.34□□□□□ -1.23
CLK1-203ENST00000409769 LMNB2Q03252 620 aa7.33□□□□□ -1.24
CLK1-203ENST00000409769 PWP1Q13610 501 aa7.33□□□□□ -1.24
CLK1-203ENST00000409769 RALGPS1Q5JS13 557 aa7.33□□□□□ -1.24
CLK1-203ENST00000409769 TSPYL5Q86VY4 417 aaPredicted RBP7.33□□□□□ -1.24
CLK1-203ENST00000409769 SLFN12Q8IYM2 578 aa7.33□□□□□ -1.24
CLK1-203ENST00000409769 OXR1Q8N573 874 aa7.33□□□□□ -1.24
CLK1-203ENST00000409769 JARID2Q92833 1246 aaPredicted RBP7.33□□□□□ -1.24
CLK1-203ENST00000409769 SCRIBQ14160 1630 aa7.33□□□□□ -1.24
CLK1-203ENST00000409769 CILPO75339 1184 aa7.32□□□□□ -1.24
CLK1-203ENST00000409769 C1QTNF9P0C862 333 aa7.32□□□□□ -1.24
CLK1-203ENST00000409769 MED14OSP0DP75 135 aa7.32□□□□□ -1.24
CLK1-203ENST00000409769 HK2P52789 917 aa7.32□□□□□ -1.24
CLK1-203ENST00000409769 C1QL4Q86Z23 238 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms