RNA–Protein interactions for RNA: ENST00000409543.6

TSPAN4-209, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,031 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-209ENST00000409543 GCC1Q96CN9 775 aa23.58■■□□□ 1.37
TSPAN4-209ENST00000409543 DYNLL2Q96FJ2 89 aa23.58■■□□□ 1.37
TSPAN4-209ENST00000409543 BAZ2AQ9UIF9 1905 aaKnown RBP23.58■■□□□ 1.37
TSPAN4-209ENST00000409543 MPHOSPH10O00566 681 aaKnown RBP23.57■■□□□ 1.36
TSPAN4-209ENST00000409543 EN2P19622 333 aaPredicted RBP23.57■■□□□ 1.36
TSPAN4-209ENST00000409543 MX1P20591 662 aa23.57■■□□□ 1.36
TSPAN4-209ENST00000409543 IRF5Q13568 498 aa23.57■■□□□ 1.36
TSPAN4-209ENST00000409543 ZYXQ15942 572 aaKnown RBP23.57■■□□□ 1.36
TSPAN4-209ENST00000409543 LRRFIP1Q32MZ4 808 aaKnown RBP23.57■■□□□ 1.36
TSPAN4-209ENST00000409543 SLAIN1Q8ND83 568 aa23.57■■□□□ 1.36
TSPAN4-209ENST00000409543 OSBP2Q969R2 916 aa23.57■■□□□ 1.36
TSPAN4-209ENST00000409543 ZBTB47Q9UFB7 747 aaPredicted RBP23.57■■□□□ 1.36
TSPAN4-209ENST00000409543 PDE4DIPQ5VU43 2346 aa23.57■■□□□ 1.36
TSPAN4-209ENST00000409543 CYP2D7A0A087X1C5 515 aa23.56■■□□□ 1.36
TSPAN4-209ENST00000409543 MYCP01106 439 aaPredicted RBP23.56■■□□□ 1.36
TSPAN4-209ENST00000409543 ANKRD45Q5TZF3 282 aa23.56■■□□□ 1.36
TSPAN4-209ENST00000409543 CTR9Q6PD62 1173 aa23.56■■□□□ 1.36
TSPAN4-209ENST00000409543 TMEM179Q6ZVK1 233 aa23.56■■□□□ 1.36
TSPAN4-209ENST00000409543 GTF3C2Q8WUA4 911 aaPredicted RBP23.56■■□□□ 1.36
TSPAN4-209ENST00000409543 USP17L15C9J2P7 530 aa23.55■■□□□ 1.36
TSPAN4-209ENST00000409543 USP17L13C9JLJ4 530 aa23.55■■□□□ 1.36
TSPAN4-209ENST00000409543 USP17L11C9JVI0 530 aa23.55■■□□□ 1.36
TSPAN4-209ENST00000409543 USP17L18D6R9N7 530 aa23.55■■□□□ 1.36
TSPAN4-209ENST00000409543 USP17L22D6RA61 530 aa23.55■■□□□ 1.36
TSPAN4-209ENST00000409543 USP17L17D6RBQ6 530 aa23.55■■□□□ 1.36
TSPAN4-209ENST00000409543 USP17L19D6RCP7 530 aa23.55■■□□□ 1.36
TSPAN4-209ENST00000409543 USP17L20D6RJB6 530 aa23.55■■□□□ 1.36
TSPAN4-209ENST00000409543 USP17L24Q0WX57 530 aa23.55■■□□□ 1.36
TSPAN4-209ENST00000409543 GPRC5AQ8NFJ5 357 aa23.55■■□□□ 1.36
TSPAN4-209ENST00000409543 PXYLP1Q8TE99 480 aa23.55■■□□□ 1.36
TSPAN4-209ENST00000409543 CCDC17Q96LX7 622 aa23.55■■□□□ 1.36
TSPAN4-209ENST00000409543 RBPJLQ9UBG7 517 aa23.55■■□□□ 1.36
TSPAN4-209ENST00000409543 SALL3Q9BXA9 1300 aa23.55■■□□□ 1.36
TSPAN4-209ENST00000409543 ADCY3O60266 1144 aa23.54■■□□□ 1.36
TSPAN4-209ENST00000409543 CDK8P49336 464 aa23.54■■□□□ 1.36
TSPAN4-209ENST00000409543 GIMAP6Q6P9H5 292 aa23.54■■□□□ 1.36
TSPAN4-209ENST00000409543 C16orf86Q6ZW13 317 aa23.54■■□□□ 1.36
TSPAN4-209ENST00000409543 TXNRD2Q9NNW7 524 aa23.54■■□□□ 1.36
TSPAN4-209ENST00000409543 ARPP21Q9UBL0 812 aaPredicted RBP23.54■■□□□ 1.36
TSPAN4-209ENST00000409543 BIN2Q9UBW5 565 aaPredicted RBP23.54■■□□□ 1.36
TSPAN4-209ENST00000409543 DOCK3Q8IZD9 2030 aa23.54■■□□□ 1.36
TSPAN4-209ENST00000409543 GSG1L2A8MUP6 293 aa23.53■■□□□ 1.36
TSPAN4-209ENST00000409543 SMIM22K7EJ46 135 aa23.53■■□□□ 1.36
TSPAN4-209ENST00000409543 VCAM1P19320 739 aa23.53■■□□□ 1.36
TSPAN4-209ENST00000409543 UBXN2AP68543 259 aa23.53■■□□□ 1.36
TSPAN4-209ENST00000409543 MTFR1Q15390 333 aa23.53■■□□□ 1.36
TSPAN4-209ENST00000409543 SBK1Q52WX2 424 aa23.53■■□□□ 1.36
TSPAN4-209ENST00000409543 CATSPERGQ6ZRH7 1159 aa23.53■■□□□ 1.36
TSPAN4-209ENST00000409543 MYH8P13535 1937 aa23.53■■□□□ 1.36
TSPAN4-209ENST00000409543 A0A1W2PRG0 241 aa23.52■■□□□ 1.36
TSPAN4-209ENST00000409543 GPAA1O43292 621 aa23.52■■□□□ 1.36
TSPAN4-209ENST00000409543 AKR1B1P15121 316 aa23.52■■□□□ 1.36
TSPAN4-209ENST00000409543 GNAT2P19087 354 aa23.52■■□□□ 1.36
TSPAN4-209ENST00000409543 PEX10O60683 326 aa23.51■■□□□ 1.35
TSPAN4-209ENST00000409543 POTEEQ6S8J3 1075 aa23.51■■□□□ 1.35
TSPAN4-209ENST00000409543 FSD1Q9BTV5 496 aa23.51■■□□□ 1.35
TSPAN4-209ENST00000409543 STAP2Q9UGK3 403 aa23.51■■□□□ 1.35
TSPAN4-209ENST00000409543 GJD2Q9UKL4 321 aa23.51■■□□□ 1.35
TSPAN4-209ENST00000409543 M0R2C6 588 aa23.5■■□□□ 1.35
TSPAN4-209ENST00000409543 CCL5P13501 91 aa23.5■■□□□ 1.35
TSPAN4-209ENST00000409543 ELNP15502 786 aa23.5■■□□□ 1.35
TSPAN4-209ENST00000409543 ERVK-9P63128 1117 aa23.5■■□□□ 1.35
TSPAN4-209ENST00000409543 ERVK-24P63145 666 aa23.5■■□□□ 1.35
TSPAN4-209ENST00000409543 Q3C1V9 767 aa23.5■■□□□ 1.35
TSPAN4-209ENST00000409543 SIAH1Q8IUQ4 282 aa23.5■■□□□ 1.35
TSPAN4-209ENST00000409543 RPAP3Q9H6T3 665 aaPredicted RBP23.5■■□□□ 1.35
TSPAN4-209ENST00000409543 RABGAP1Q9Y3P9 1069 aa23.5■■□□□ 1.35
TSPAN4-209ENST00000409543 BRCA2P51587 3418 aa23.49■■□□□ 1.35
TSPAN4-209ENST00000409543 GJB1P08034 283 aa23.49■■□□□ 1.35
TSPAN4-209ENST00000409543 MAPK4P31152 587 aa23.49■■□□□ 1.35
TSPAN4-209ENST00000409543 LBX2Q6XYB7 198 aa23.49■■□□□ 1.35
TSPAN4-209ENST00000409543 NKX2-3Q8TAU0 364 aa23.49■■□□□ 1.35
TSPAN4-209ENST00000409543 PAGR1Q9BTK6 254 aa23.49■■□□□ 1.35
TSPAN4-209ENST00000409543 RWDD1Q9H446 243 aaPredicted RBP23.49■■□□□ 1.35
TSPAN4-209ENST00000409543 ARHGEF10LQ9HCE6 1279 aa23.49■■□□□ 1.35
TSPAN4-209ENST00000409543 TMX2Q9Y320 296 aa23.49■■□□□ 1.35
TSPAN4-209ENST00000409543 PATL2C9JE40 543 aaKnown RBP23.48■■□□□ 1.35
TSPAN4-209ENST00000409543 INHAP05111 366 aa23.48■■□□□ 1.35
TSPAN4-209ENST00000409543 ICA1Q05084 483 aa23.48■■□□□ 1.35
TSPAN4-209ENST00000409543 RNF208Q9H0X6 261 aa23.48■■□□□ 1.35
TSPAN4-209ENST00000409543 SH2D4AQ9H788 454 aa23.48■■□□□ 1.35
TSPAN4-209ENST00000409543 APPP05067 770 aa23.47■■□□□ 1.35
TSPAN4-209ENST00000409543 GJA8P48165 433 aa23.47■■□□□ 1.35
TSPAN4-209ENST00000409543 PDE1AP54750 535 aa23.47■■□□□ 1.35
TSPAN4-209ENST00000409543 ZMYM1Q5SVZ6 1142 aa23.47■■□□□ 1.35
TSPAN4-209ENST00000409543 CCAR1Q8IX12 1150 aaKnown RBP23.47■■□□□ 1.35
TSPAN4-209ENST00000409543 SMC5Q8IY18 1101 aa23.47■■□□□ 1.35
TSPAN4-209ENST00000409543 LPAR1Q92633 364 aa23.47■■□□□ 1.35
TSPAN4-209ENST00000409543 SEC62Q99442 399 aaKnown RBP23.47■■□□□ 1.35
TSPAN4-209ENST00000409543 KANSL2Q9H9L4 492 aa23.47■■□□□ 1.35
TSPAN4-209ENST00000409543 EPB41L4AQ9HCS5 686 aaPredicted RBP23.47■■□□□ 1.35
TSPAN4-209ENST00000409543 MINDY4BA8MYZ0 360 aa23.46■■□□□ 1.35
TSPAN4-209ENST00000409543 CNMDO75829 334 aa23.46■■□□□ 1.35
TSPAN4-209ENST00000409543 TDO2P48775 406 aa23.46■■□□□ 1.35
TSPAN4-209ENST00000409543 PRPF38BQ5VTL8 546 aaKnown RBP23.46■■□□□ 1.35
TSPAN4-209ENST00000409543 CLEC10AQ8IUN9 316 aa23.46■■□□□ 1.35
TSPAN4-209ENST00000409543 EXOC6Q8TAG9 804 aa23.46■■□□□ 1.35
TSPAN4-209ENST00000409543 SOCS4Q8WXH5 440 aa23.46■■□□□ 1.35
TSPAN4-209ENST00000409543 ROBO3Q96MS0 1386 aa23.46■■□□□ 1.35
TSPAN4-209ENST00000409543 UNC93B1Q9H1C4 597 aa23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms