RNA–Protein interactions for RNA: ENST00000409472.5

SCAMP4-202, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2 BASIC

Gene SCAMP4, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-202ENST00000409472 SARM1Q6SZW1 724 aa17.46■□□□□ 0.39
SCAMP4-202ENST00000409472 USP49Q70CQ1 688 aa17.46■□□□□ 0.39
SCAMP4-202ENST00000409472 IPO4Q8TEX9 1081 aaKnown RBP17.46■□□□□ 0.39
SCAMP4-202ENST00000409472 CUTAO60888 179 aa17.46■□□□□ 0.39
SCAMP4-202ENST00000409472 RASGRP2Q7LDG7 609 aa17.46■□□□□ 0.39
SCAMP4-202ENST00000409472 FOXP4Q8IVH2 680 aaPredicted RBP17.46■□□□□ 0.39
SCAMP4-202ENST00000409472 JMYQ8N9B5 988 aa17.46■□□□□ 0.39
SCAMP4-202ENST00000409472 FAM237AA0A1B0GTK4 181 aa17.45■□□□□ 0.38
SCAMP4-202ENST00000409472 TSPY2A6NKD2 308 aa17.45■□□□□ 0.38
SCAMP4-202ENST00000409472 KRI1Q8N9T8 703 aaKnown RBP17.45■□□□□ 0.38
SCAMP4-202ENST00000409472 CACTINQ8WUQ7 758 aaKnown RBP17.45■□□□□ 0.38
SCAMP4-202ENST00000409472 PHF20Q9BVI0 1012 aa17.45■□□□□ 0.38
SCAMP4-202ENST00000409472 QTRT2Q9H974 415 aaKnown RBP17.45■□□□□ 0.38
SCAMP4-202ENST00000409472 IL17RBQ9NRM6 502 aa17.45■□□□□ 0.38
SCAMP4-202ENST00000409472 SPTLC3Q9NUV7 552 aa17.45■□□□□ 0.38
SCAMP4-202ENST00000409472 SAP30BPQ9UHR5 308 aaKnown RBP17.45■□□□□ 0.38
SCAMP4-202ENST00000409472 KCNH3Q9ULD8 1083 aa17.45■□□□□ 0.38
SCAMP4-202ENST00000409472 GOLGA6L6A8MZA4 724 aa17.45■□□□□ 0.38
SCAMP4-202ENST00000409472 ADRA2BP18089 450 aa17.45■□□□□ 0.38
SCAMP4-202ENST00000409472 USP5P45974 858 aa17.45■□□□□ 0.38
SCAMP4-202ENST00000409472 SBK1Q52WX2 424 aa17.45■□□□□ 0.38
SCAMP4-202ENST00000409472 PROM2Q8N271 834 aa17.45■□□□□ 0.38
SCAMP4-202ENST00000409472 TGFBRAP1Q8WUH2 860 aa17.45■□□□□ 0.38
SCAMP4-202ENST00000409472 PRPF3O43395 683 aaKnown RBP17.44■□□□□ 0.38
SCAMP4-202ENST00000409472 DDAH1O94760 285 aa17.44■□□□□ 0.38
SCAMP4-202ENST00000409472 NLRP12P59046 1061 aa17.44■□□□□ 0.38
SCAMP4-202ENST00000409472 NCAPHQ15003 741 aa17.44■□□□□ 0.38
SCAMP4-202ENST00000409472 RILPL1Q5EBL4 403 aa17.44■□□□□ 0.38
SCAMP4-202ENST00000409472 C12orf60Q5U649 245 aa17.44■□□□□ 0.38
SCAMP4-202ENST00000409472 ZNF804AQ7Z570 1209 aa17.44■□□□□ 0.38
SCAMP4-202ENST00000409472 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.44■□□□□ 0.38
SCAMP4-202ENST00000409472 MAPKAPK5Q8IW41 473 aa17.44■□□□□ 0.38
SCAMP4-202ENST00000409472 WDR66Q8TBY9 1149 aa17.44■□□□□ 0.38
SCAMP4-202ENST00000409472 CD209Q9NNX6 404 aa17.44■□□□□ 0.38
SCAMP4-202ENST00000409472 USP17L3A6NCW0 530 aa17.44■□□□□ 0.38
SCAMP4-202ENST00000409472 USP17L4A6NCW7 530 aa17.44■□□□□ 0.38
SCAMP4-202ENST00000409472 PCP11498 1178 aaKnown RBP17.44■□□□□ 0.38
SCAMP4-202ENST00000409472 PLCD1P51178 756 aa17.44■□□□□ 0.38
SCAMP4-202ENST00000409472 AKAP17AQ02040 695 aaKnown RBP17.44■□□□□ 0.38
SCAMP4-202ENST00000409472 SPTY2D1Q68D10 685 aaPredicted RBP17.44■□□□□ 0.38
SCAMP4-202ENST00000409472 OLFM4Q6UX06 510 aa17.44■□□□□ 0.38
SCAMP4-202ENST00000409472 USP17L1Q7RTZ2 530 aa17.44■□□□□ 0.38
SCAMP4-202ENST00000409472 GRAMD1CQ8IYS0 662 aa17.44■□□□□ 0.38
SCAMP4-202ENST00000409472 RTFDC1Q9BY42 306 aaPredicted RBP17.44■□□□□ 0.38
SCAMP4-202ENST00000409472 POLLQ9UGP5 575 aa17.44■□□□□ 0.38
SCAMP4-202ENST00000409472 LTBP1Q14766 1721 aa17.44■□□□□ 0.38
SCAMP4-202ENST00000409472 PRR29P0C7W0 189 aa17.43■□□□□ 0.38
SCAMP4-202ENST00000409472 PTPREP23469 700 aa17.43■□□□□ 0.38
SCAMP4-202ENST00000409472 TFAP4Q01664 338 aa17.43■□□□□ 0.38
SCAMP4-202ENST00000409472 KRBA2Q6ZNG9 492 aa17.43■□□□□ 0.38
SCAMP4-202ENST00000409472 ANKRD31Q8N7Z5 1873 aa17.43■□□□□ 0.38
SCAMP4-202ENST00000409472 TIGD1Q96MW7 591 aa17.43■□□□□ 0.38
SCAMP4-202ENST00000409472 HSD3B7Q9H2F3 369 aa17.43■□□□□ 0.38
SCAMP4-202ENST00000409472 TUBE1Q9UJT0 475 aa17.43■□□□□ 0.38
SCAMP4-202ENST00000409472 DDX60LQ5H9U9 1706 aaKnown RBP17.43■□□□□ 0.38
SCAMP4-202ENST00000409472 POLRMTO00411 1230 aaKnown RBP17.43■□□□□ 0.38
SCAMP4-202ENST00000409472 ST5P78524 1137 aa17.43■□□□□ 0.38
SCAMP4-202ENST00000409472 PDILTQ8N807 584 aa17.43■□□□□ 0.38
SCAMP4-202ENST00000409472 MRFAP1L1Q96HT8 127 aa17.43■□□□□ 0.38
SCAMP4-202ENST00000409472 BMP6P22004 513 aa17.42■□□□□ 0.38
SCAMP4-202ENST00000409472 CDC25BP30305 580 aa17.42■□□□□ 0.38
SCAMP4-202ENST00000409472 PDE4BQ07343 736 aa17.42■□□□□ 0.38
SCAMP4-202ENST00000409472 DNTTIP2Q5QJE6 756 aaKnown RBP17.42■□□□□ 0.38
SCAMP4-202ENST00000409472 STAG2Q8N3U4 1231 aa17.42■□□□□ 0.38
SCAMP4-202ENST00000409472 MYRIPQ8NFW9 859 aa17.42■□□□□ 0.38
SCAMP4-202ENST00000409472 TNFRSF25Q93038 417 aa17.42■□□□□ 0.38
SCAMP4-202ENST00000409472 CSRNP2Q9H175 543 aa17.42■□□□□ 0.38
SCAMP4-202ENST00000409472 RBM28Q9NW13 759 aaKnown RBP17.42■□□□□ 0.38
SCAMP4-202ENST00000409472 MTMR7Q9Y216 660 aa17.42■□□□□ 0.38
SCAMP4-202ENST00000409472 KRT2P35908 639 aa17.42■□□□□ 0.38
SCAMP4-202ENST00000409472 ZRSR1Q15695 479 aaKnown RBP17.42■□□□□ 0.38
SCAMP4-202ENST00000409472 SLC35G1Q2M3R5 365 aa17.42■□□□□ 0.38
SCAMP4-202ENST00000409472 CNNM3Q8NE01 707 aa17.42■□□□□ 0.38
SCAMP4-202ENST00000409472 CTCFLQ8NI51 663 aaPredicted RBP17.42■□□□□ 0.38
SCAMP4-202ENST00000409472 NAT10Q9H0A0 1025 aaKnown RBP17.42■□□□□ 0.38
SCAMP4-202ENST00000409472 A0A087X0B3 334 aa17.41■□□□□ 0.38
SCAMP4-202ENST00000409472 ATP1A3P13637 1013 aa17.41■□□□□ 0.38
SCAMP4-202ENST00000409472 BTDP43251 543 aa17.41■□□□□ 0.38
SCAMP4-202ENST00000409472 PPP2R5BQ15173 497 aa17.41■□□□□ 0.38
SCAMP4-202ENST00000409472 FILIP1Q7Z7B0 1213 aa17.41■□□□□ 0.38
SCAMP4-202ENST00000409472 GGA1Q9UJY5 639 aa17.41■□□□□ 0.38
SCAMP4-202ENST00000409472 PCDHA5Q9Y5H7 936 aa17.41■□□□□ 0.38
SCAMP4-202ENST00000409472 POLR2DO15514 142 aaKnown RBP17.4■□□□□ 0.38
SCAMP4-202ENST00000409472 CALM1P0DP23 149 aa17.4■□□□□ 0.38
SCAMP4-202ENST00000409472 CALM2P0DP24 149 aa17.4■□□□□ 0.38
SCAMP4-202ENST00000409472 CALM3P0DP25 149 aa17.4■□□□□ 0.38
SCAMP4-202ENST00000409472 RBM6P78332 1123 aaKnown RBP17.4■□□□□ 0.38
SCAMP4-202ENST00000409472 TBC1D16Q8TBP0 767 aa17.4■□□□□ 0.38
SCAMP4-202ENST00000409472 PRIMPOLQ96LW4 560 aa17.4■□□□□ 0.38
SCAMP4-202ENST00000409472 BPIFA3Q9BQP9 254 aa17.4■□□□□ 0.38
SCAMP4-202ENST00000409472 SERTAD1Q9UHV2 236 aa17.4■□□□□ 0.38
SCAMP4-202ENST00000409472 LRRC37AA6NMS7 1700 aa17.4■□□□□ 0.38
SCAMP4-202ENST00000409472 ROBO3Q96MS0 1386 aa17.4■□□□□ 0.38
SCAMP4-202ENST00000409472 SNED1Q8TER0 1413 aa17.4■□□□□ 0.38
SCAMP4-202ENST00000409472 TPM3P06753 285 aa17.4■□□□□ 0.38
SCAMP4-202ENST00000409472 LMOD1P29536 600 aaPredicted RBP17.4■□□□□ 0.38
SCAMP4-202ENST00000409472 MDM2Q00987 491 aaPredicted RBP17.4■□□□□ 0.38
SCAMP4-202ENST00000409472 ZNF827Q17R98 1081 aa17.4■□□□□ 0.38
SCAMP4-202ENST00000409472 C15orf52Q6ZUT6 534 aaKnown RBP17.4■□□□□ 0.38
SCAMP4-202ENST00000409472 KRT27Q7Z3Y8 459 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms