RNA–Protein interactions for RNA: ENST00000406949.5

PCNX4-204, Transcript of pecanex 4, humanhuman

TSL 2 BASIC

Gene PCNX4, Length 3,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-204ENST00000406949 MLKLQ8NB16 471 aa13.53□□□□□ -0.24
PCNX4-204ENST00000406949 RPGRQ92834 1020 aaKnown RBP13.53□□□□□ -0.24
PCNX4-204ENST00000406949 MAP3K14Q99558 947 aa13.53□□□□□ -0.24
PCNX4-204ENST00000406949 BAG1Q99933 345 aaPredicted RBP13.53□□□□□ -0.24
PCNX4-204ENST00000406949 DIXDC1Q155Q3 683 aa13.53□□□□□ -0.24
PCNX4-204ENST00000406949 NBPF11Q86T75 865 aa13.53□□□□□ -0.24
PCNX4-204ENST00000406949 MAPKAPK5Q8IW41 473 aa13.53□□□□□ -0.24
PCNX4-204ENST00000406949 LINC00116Q8NCU8 138 aa13.53□□□□□ -0.24
PCNX4-204ENST00000406949 DYNLL2Q96FJ2 89 aa13.53□□□□□ -0.24
PCNX4-204ENST00000406949 CTNND2Q9UQB3 1225 aa13.53□□□□□ -0.24
PCNX4-204ENST00000406949 STK36Q9NRP7 1315 aa13.53□□□□□ -0.24
PCNX4-204ENST00000406949 F8W031 263 aaPredicted RBP13.53□□□□□ -0.24
PCNX4-204ENST00000406949 C6orf229H3BNL8 230 aa13.53□□□□□ -0.24
PCNX4-204ENST00000406949 N4BP3O15049 544 aa13.53□□□□□ -0.24
PCNX4-204ENST00000406949 TOB1P50616 345 aaPredicted RBP13.53□□□□□ -0.24
PCNX4-204ENST00000406949 TEX35Q5T0J7 233 aa13.53□□□□□ -0.24
PCNX4-204ENST00000406949 TGFBRAP1Q8WUH2 860 aa13.53□□□□□ -0.24
PCNX4-204ENST00000406949 LZTFL1Q9NQ48 299 aa13.53□□□□□ -0.24
PCNX4-204ENST00000406949 KDM4FA0A1W2PPD8 638 aa13.52□□□□□ -0.24
PCNX4-204ENST00000406949 EVX2Q03828 476 aa13.52□□□□□ -0.24
PCNX4-204ENST00000406949 TSR1Q2NL82 804 aaKnown RBP13.52□□□□□ -0.24
PCNX4-204ENST00000406949 ANKRD2Q9GZV1 360 aa13.52□□□□□ -0.24
PCNX4-204ENST00000406949 ZNF804BA4D1E1 1349 aa13.52□□□□□ -0.24
PCNX4-204ENST00000406949 GOLGA8HP0CJ92 632 aa13.52□□□□□ -0.25
PCNX4-204ENST00000406949 SPTY2D1Q68D10 685 aaPredicted RBP13.52□□□□□ -0.25
PCNX4-204ENST00000406949 CTR9Q6PD62 1173 aa13.52□□□□□ -0.25
PCNX4-204ENST00000406949 FBXO2Q9UK22 296 aaPredicted RBP13.52□□□□□ -0.25
PCNX4-204ENST00000406949 SYNRGQ9UMZ2 1314 aa13.52□□□□□ -0.25
PCNX4-204ENST00000406949 PKD1L3Q7Z443 1732 aa13.52□□□□□ -0.25
PCNX4-204ENST00000406949 BAG3O95817 575 aa13.52□□□□□ -0.25
PCNX4-204ENST00000406949 CASQ1P31415 396 aa13.52□□□□□ -0.25
PCNX4-204ENST00000406949 UBA7P41226 1012 aa13.52□□□□□ -0.25
PCNX4-204ENST00000406949 STAT6P42226 847 aa13.52□□□□□ -0.25
PCNX4-204ENST00000406949 ERCC6LQ2NKX8 1250 aa13.52□□□□□ -0.25
PCNX4-204ENST00000406949 ADAMTS7Q9UKP4 1686 aa13.52□□□□□ -0.25
PCNX4-204ENST00000406949 NCAPHQ15003 741 aa13.51□□□□□ -0.25
PCNX4-204ENST00000406949 NOM1Q5C9Z4 860 aaKnown RBP13.51□□□□□ -0.25
PCNX4-204ENST00000406949 FOXP4Q8IVH2 680 aaPredicted RBP13.51□□□□□ -0.25
PCNX4-204ENST00000406949 EEF2KMTQ96G04 330 aa13.51□□□□□ -0.25
PCNX4-204ENST00000406949 NUP88Q99567 741 aaPredicted RBP13.51□□□□□ -0.25
PCNX4-204ENST00000406949 BPIFA3Q9BQP9 254 aa13.51□□□□□ -0.25
PCNX4-204ENST00000406949 OSBPL5Q9H0X9 879 aaPredicted RBP13.51□□□□□ -0.25
PCNX4-204ENST00000406949 VPS16Q9H269 839 aa13.51□□□□□ -0.25
PCNX4-204ENST00000406949 SRPRBQ9Y5M8 271 aaKnown RBP13.51□□□□□ -0.25
PCNX4-204ENST00000406949 STRCP1A6NGW2 1772 aa13.51□□□□□ -0.25
PCNX4-204ENST00000406949 GTF2F1P35269 517 aaKnown RBP eCLIP13.51□□□□□ -0.25
PCNX4-204ENST00000406949 FMR1Q06787 632 aaKnown RBP eCLIP13.51□□□□□ -0.25
PCNX4-204ENST00000406949 SOGA3Q5TF21 947 aa13.51□□□□□ -0.25
PCNX4-204ENST00000406949 E4F1Q66K89 784 aaPredicted RBP13.51□□□□□ -0.25
PCNX4-204ENST00000406949 IQUBQ8NA54 791 aa13.51□□□□□ -0.25
PCNX4-204ENST00000406949 CCDC12Q8WUD4 166 aaPredicted RBP13.51□□□□□ -0.25
PCNX4-204ENST00000406949 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.51□□□□□ -0.25
PCNX4-204ENST00000406949 ARGLU1Q9NWB6 273 aaPredicted RBP13.51□□□□□ -0.25
PCNX4-204ENST00000406949 BMP15O95972 392 aa13.51□□□□□ -0.25
PCNX4-204ENST00000406949 SCG2P13521 617 aa13.51□□□□□ -0.25
PCNX4-204ENST00000406949 ARHGAP29Q52LW3 1261 aa13.51□□□□□ -0.25
PCNX4-204ENST00000406949 PNMA1Q8ND90 353 aa13.51□□□□□ -0.25
PCNX4-204ENST00000406949 TUBE1Q9UJT0 475 aa13.51□□□□□ -0.25
PCNX4-204ENST00000406949 HPSEQ9Y251 543 aa13.51□□□□□ -0.25
PCNX4-204ENST00000406949 PICALMQ13492 652 aa13.5□□□□□ -0.25
PCNX4-204ENST00000406949 SPECC1LQ69YQ0 1117 aa13.5□□□□□ -0.25
PCNX4-204ENST00000406949 IGSF22Q8N9C0 903 aa13.5□□□□□ -0.25
PCNX4-204ENST00000406949 ERO1AQ96HE7 468 aa13.5□□□□□ -0.25
PCNX4-204ENST00000406949 DCP1AQ9NPI6 582 aaPredicted RBP13.5□□□□□ -0.25
PCNX4-204ENST00000406949 CLEC4GQ6UXB4 293 aa13.5□□□□□ -0.25
PCNX4-204ENST00000406949 PTF1AQ7RTS3 328 aa13.5□□□□□ -0.25
PCNX4-204ENST00000406949 CNBD1Q8NA66 436 aa13.5□□□□□ -0.25
PCNX4-204ENST00000406949 SLC44A5Q8NCS7 719 aa13.5□□□□□ -0.25
PCNX4-204ENST00000406949 CPVLQ9H3G5 476 aa13.5□□□□□ -0.25
PCNX4-204ENST00000406949 LAMB4A4D0S4 1761 aa13.5□□□□□ -0.25
PCNX4-204ENST00000406949 USP17L3A6NCW0 530 aa13.5□□□□□ -0.25
PCNX4-204ENST00000406949 USP17L4A6NCW7 530 aa13.5□□□□□ -0.25
PCNX4-204ENST00000406949 UBAP1LF5GYI3 381 aa13.5□□□□□ -0.25
PCNX4-204ENST00000406949 PPP2R5BQ15173 497 aa13.5□□□□□ -0.25
PCNX4-204ENST00000406949 USP17L1Q7RTZ2 530 aa13.5□□□□□ -0.25
PCNX4-204ENST00000406949 VSTM4Q8IW00 320 aa13.5□□□□□ -0.25
PCNX4-204ENST00000406949 UFL1O94874 794 aa13.49□□□□□ -0.25
PCNX4-204ENST00000406949 BRD2P25440 801 aaKnown RBP13.49□□□□□ -0.25
PCNX4-204ENST00000406949 EIF6P56537 245 aaKnown RBP13.49□□□□□ -0.25
PCNX4-204ENST00000406949 EARS2Q5JPH6 523 aaKnown RBP13.49□□□□□ -0.25
PCNX4-204ENST00000406949 CCDC47Q96A33 483 aaKnown RBP13.49□□□□□ -0.25
PCNX4-204ENST00000406949 NSUN4Q96CB9 384 aaKnown RBP13.49□□□□□ -0.25
PCNX4-204ENST00000406949 CARD6Q9BX69 1037 aa13.49□□□□□ -0.25
PCNX4-204ENST00000406949 MAGEC2Q9UBF1 373 aaPredicted RBP13.49□□□□□ -0.25
PCNX4-204ENST00000406949 NAPAP54920 295 aa13.49□□□□□ -0.25
PCNX4-204ENST00000406949 TMTC3Q6ZXV5 915 aa13.49□□□□□ -0.25
PCNX4-204ENST00000406949 RIOK1Q9BRS2 568 aaKnown RBP13.49□□□□□ -0.25
PCNX4-204ENST00000406949 BRIP1Q9BX63 1249 aa13.49□□□□□ -0.25
PCNX4-204ENST00000406949 SEC63Q9UGP8 760 aaKnown RBP13.49□□□□□ -0.25
PCNX4-204ENST00000406949 THRAP3Q9Y2W1 955 aaKnown RBP13.49□□□□□ -0.25
PCNX4-204ENST00000406949 ABCC6O95255 1503 aa13.48□□□□□ -0.25
PCNX4-204ENST00000406949 PRPF3O43395 683 aaKnown RBP13.48□□□□□ -0.25
PCNX4-204ENST00000406949 ETF1P62495 437 aaKnown RBP13.48□□□□□ -0.25
PCNX4-204ENST00000406949 TXNRD3Q86VQ6 643 aa13.48□□□□□ -0.25
PCNX4-204ENST00000406949 SRBD1Q8N5C6 995 aaKnown RBP13.48□□□□□ -0.25
PCNX4-204ENST00000406949 FERMT2Q96AC1 680 aa13.48□□□□□ -0.25
PCNX4-204ENST00000406949 ARPP21Q9UBL0 812 aaPredicted RBP13.48□□□□□ -0.25
PCNX4-204ENST00000406949 AKR1B15C9JRZ8 316 aaPredicted RBP13.48□□□□□ -0.25
PCNX4-204ENST00000406949 ARHGAP6O43182 974 aa13.48□□□□□ -0.25
PCNX4-204ENST00000406949 CALML3P27482 149 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms