RNA–Protein interactions for RNA: ENST00000406072.5

HDAC9-203, Transcript of histone deacetylase 9, humanhuman

TSL 5 BASIC

Gene HDAC9, Length 4,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-203ENST00000406072 NBPF26B4DH59 902 aa6.58□□□□□ -1.36
HDAC9-203ENST00000406072 CDKL5O76039 1030 aa6.58□□□□□ -1.36
HDAC9-203ENST00000406072 STARD3NLO95772 234 aa6.58□□□□□ -1.36
HDAC9-203ENST00000406072 TRIM21P19474 475 aaKnown RBP6.58□□□□□ -1.36
HDAC9-203ENST00000406072 ATP8B2P98198 1209 aa6.58□□□□□ -1.36
HDAC9-203ENST00000406072 LONRF3Q496Y0 759 aa6.58□□□□□ -1.36
HDAC9-203ENST00000406072 NBPF14Q5TI25 921 aa6.58□□□□□ -1.36
HDAC9-203ENST00000406072 KCTD16Q68DU8 428 aa6.58□□□□□ -1.36
HDAC9-203ENST00000406072 NAIF1Q69YI7 327 aaPredicted RBP6.58□□□□□ -1.36
HDAC9-203ENST00000406072 NBPF10Q6P3W6 841 aaKnown RBP6.58□□□□□ -1.36
HDAC9-203ENST00000406072 CLEC4GQ6UXB4 293 aa6.58□□□□□ -1.36
HDAC9-203ENST00000406072 G2E3Q7L622 706 aa6.58□□□□□ -1.36
HDAC9-203ENST00000406072 CACNA2D4Q7Z3S7 1137 aa6.58□□□□□ -1.36
HDAC9-203ENST00000406072 CACNA2D3Q8IZS8 1091 aa6.58□□□□□ -1.36
HDAC9-203ENST00000406072 NBPF15Q8N660 670 aa6.58□□□□□ -1.36
HDAC9-203ENST00000406072 IGSF22Q8N9C0 903 aa6.58□□□□□ -1.36
HDAC9-203ENST00000406072 IFT74Q96LB3 600 aa6.58□□□□□ -1.36
HDAC9-203ENST00000406072 SLC4A9Q96Q91 983 aa6.58□□□□□ -1.36
HDAC9-203ENST00000406072 MTMR6Q9Y217 621 aa6.58□□□□□ -1.36
HDAC9-203ENST00000406072 STK38LQ9Y2H1 464 aa6.58□□□□□ -1.36
HDAC9-203ENST00000406072 ZDHHC9Q9Y397 364 aa6.58□□□□□ -1.36
HDAC9-203ENST00000406072 A0A087WWV3 80 aa6.57□□□□□ -1.36
HDAC9-203ENST00000406072 H7C1W4 665 aa6.57□□□□□ -1.36
HDAC9-203ENST00000406072 MYO1BO43795 1136 aa6.57□□□□□ -1.36
HDAC9-203ENST00000406072 PPP1R12BO60237 982 aaPredicted RBP6.57□□□□□ -1.36
HDAC9-203ENST00000406072 ZFYP08048 801 aaPredicted RBP6.57□□□□□ -1.36
HDAC9-203ENST00000406072 POLE2P56282 527 aa6.57□□□□□ -1.36
HDAC9-203ENST00000406072 TSNAXIP1Q2TAA8 658 aa6.57□□□□□ -1.36
HDAC9-203ENST00000406072 CCDC144BQ3MJ40 725 aa6.57□□□□□ -1.36
HDAC9-203ENST00000406072 GNPTABQ3T906 1256 aa6.57□□□□□ -1.36
HDAC9-203ENST00000406072 RASIP1Q5U651 963 aa6.57□□□□□ -1.36
HDAC9-203ENST00000406072 INTS5Q6P9B9 1019 aaKnown RBP6.57□□□□□ -1.36
HDAC9-203ENST00000406072 CEP128Q6ZU80 1094 aa6.57□□□□□ -1.36
HDAC9-203ENST00000406072 CCDC144CPQ8IYA2 1237 aa6.57□□□□□ -1.36
HDAC9-203ENST00000406072 TEX11Q8IYF3 940 aa6.57□□□□□ -1.36
HDAC9-203ENST00000406072 PPFIBP2Q8ND30 876 aa6.57□□□□□ -1.36
HDAC9-203ENST00000406072 CTAGE1Q96RT6 745 aa6.57□□□□□ -1.36
HDAC9-203ENST00000406072 CDC23Q9UJX2 597 aa6.57□□□□□ -1.36
HDAC9-203ENST00000406072 TTF2Q9UNY4 1162 aaKnown RBP6.57□□□□□ -1.36
HDAC9-203ENST00000406072 MAP3K15Q6ZN16 1313 aa6.57□□□□□ -1.36
HDAC9-203ENST00000406072 PHLPP2Q6ZVD8 1323 aa6.57□□□□□ -1.36
HDAC9-203ENST00000406072 CETN3O15182 167 aa6.57□□□□□ -1.36
HDAC9-203ENST00000406072 IDEP14735 1019 aa6.57□□□□□ -1.36
HDAC9-203ENST00000406072 KRT83P78385 493 aa6.57□□□□□ -1.36
HDAC9-203ENST00000406072 MAP3K9P80192 1104 aa6.57□□□□□ -1.36
HDAC9-203ENST00000406072 CCDC40Q4G0X9 1142 aa6.57□□□□□ -1.36
HDAC9-203ENST00000406072 DHX58Q96C10 678 aa6.57□□□□□ -1.36
HDAC9-203ENST00000406072 IL17RAQ96F46 866 aa6.57□□□□□ -1.36
HDAC9-203ENST00000406072 NGLY1Q96IV0 654 aa6.57□□□□□ -1.36
HDAC9-203ENST00000406072 FAM114A2Q9NRY5 505 aa6.57□□□□□ -1.36
HDAC9-203ENST00000406072 ECHDC1Q9NTX5 307 aa6.57□□□□□ -1.36
HDAC9-203ENST00000406072 ZNF646O15015 1829 aaPredicted RBP6.57□□□□□ -1.36
HDAC9-203ENST00000406072 PLSCR1O15162 318 aa6.57□□□□□ -1.36
HDAC9-203ENST00000406072 HIP1RO75146 1068 aa6.57□□□□□ -1.36
HDAC9-203ENST00000406072 ZMYND10O75800 440 aa6.57□□□□□ -1.36
HDAC9-203ENST00000406072 CDC25BP30305 580 aa6.57□□□□□ -1.36
HDAC9-203ENST00000406072 PLA2G4AP47712 749 aa6.57□□□□□ -1.36
HDAC9-203ENST00000406072 CORO7P57737 925 aa6.57□□□□□ -1.36
HDAC9-203ENST00000406072 FAM196AQ6ZSG2 479 aa6.57□□□□□ -1.36
HDAC9-203ENST00000406072 RAB11FIP4Q86YS3 637 aa6.57□□□□□ -1.36
HDAC9-203ENST00000406072 CNGA4Q8IV77 575 aa6.57□□□□□ -1.36
HDAC9-203ENST00000406072 NUTM2AQ8IVF1 878 aaPredicted RBP6.57□□□□□ -1.36
HDAC9-203ENST00000406072 SIRT2Q8IXJ6 389 aa6.57□□□□□ -1.36
HDAC9-203ENST00000406072 CDK5RAP3Q96JB5 506 aa6.57□□□□□ -1.36
HDAC9-203ENST00000406072 TSC22D3Q99576 134 aa6.57□□□□□ -1.36
HDAC9-203ENST00000406072 USP44Q9H0E7 712 aa6.57□□□□□ -1.36
HDAC9-203ENST00000406072 CCDC8Q9H0W5 538 aaPredicted RBP6.57□□□□□ -1.36
HDAC9-203ENST00000406072 LCMT1Q9UIC8 334 aa6.57□□□□□ -1.36
HDAC9-203ENST00000406072 MACROD2A1Z1Q3 448 aa6.57□□□□□ -1.36
HDAC9-203ENST00000406072 NEURL1BA8MQ27 555 aa6.57□□□□□ -1.36
HDAC9-203ENST00000406072 HNRNPH1P31943 449 aaKnown RBP6.57□□□□□ -1.36
HDAC9-203ENST00000406072 SF3B2Q13435 895 aaKnown RBP6.57□□□□□ -1.36
HDAC9-203ENST00000406072 HIBCHQ6NVY1 386 aaPredicted RBP6.57□□□□□ -1.36
HDAC9-203ENST00000406072 GBP5Q96PP8 586 aa6.57□□□□□ -1.36
HDAC9-203ENST00000406072 SNX14Q9Y5W7 946 aa6.57□□□□□ -1.36
HDAC9-203ENST00000406072 U3KPZ7 1027 aaPredicted RBP6.57□□□□□ -1.36
HDAC9-203ENST00000406072 KIF3CO14782 793 aa6.56□□□□□ -1.36
HDAC9-203ENST00000406072 AFMP43652 599 aa6.56□□□□□ -1.36
HDAC9-203ENST00000406072 NOP2P46087 812 aaKnown RBP6.56□□□□□ -1.36
HDAC9-203ENST00000406072 SEPT6Q14141 434 aa6.56□□□□□ -1.36
HDAC9-203ENST00000406072 ZNF365Q70YC5 407 aa6.56□□□□□ -1.36
HDAC9-203ENST00000406072 RUFY3Q7L099 469 aa6.56□□□□□ -1.36
HDAC9-203ENST00000406072 RIC3Q7Z5B4 369 aa6.56□□□□□ -1.36
HDAC9-203ENST00000406072 CCDC82Q8N4S0 544 aa6.56□□□□□ -1.36
HDAC9-203ENST00000406072 CCDC155Q8N6L0 562 aa6.56□□□□□ -1.36
HDAC9-203ENST00000406072 EVI5LQ96CN4 794 aa6.56□□□□□ -1.36
HDAC9-203ENST00000406072 STIM2Q9P246 746 aa6.56□□□□□ -1.36
HDAC9-203ENST00000406072 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.56□□□□□ -1.36
HDAC9-203ENST00000406072 TNRC6CQ9HCJ0 1690 aaKnown RBP6.56□□□□□ -1.36
HDAC9-203ENST00000406072 LUC7L3O95232 432 aaKnown RBP6.56□□□□□ -1.36
HDAC9-203ENST00000406072 SCP2P22307 547 aa6.56□□□□□ -1.36
HDAC9-203ENST00000406072 GOLGA8FQ08AF8 430 aa6.56□□□□□ -1.36
HDAC9-203ENST00000406072 GOLGA8DPQ0D2H9 430 aa6.56□□□□□ -1.36
HDAC9-203ENST00000406072 PRPF4BQ13523 1007 aaKnown RBP6.56□□□□□ -1.36
HDAC9-203ENST00000406072 CAPRIN2Q6IMN6 1127 aaKnown RBP6.56□□□□□ -1.36
HDAC9-203ENST00000406072 C8orf74Q6P047 294 aa6.56□□□□□ -1.36
HDAC9-203ENST00000406072 PACS2Q86VP3 889 aa6.56□□□□□ -1.36
HDAC9-203ENST00000406072 ZNF34Q8IZ26 560 aa6.56□□□□□ -1.36
HDAC9-203ENST00000406072 C8orf37Q96NL8 207 aa6.56□□□□□ -1.36
HDAC9-203ENST00000406072 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms