RNA–Protein interactions for RNA: ENST00000405692.2

PDGFA-204, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 5

Gene PDGFA, Length 663 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-204ENST00000405692 KIAA1683Q9H0B3 1180 aa24.8■■□□□ 1.56
PDGFA-204ENST00000405692 CASP8AP2Q9UKL3 1982 aa24.8■■□□□ 1.56
PDGFA-204ENST00000405692 AKR1B1P15121 316 aa24.79■■□□□ 1.56
PDGFA-204ENST00000405692 PPARAQ07869 468 aa24.79■■□□□ 1.56
PDGFA-204ENST00000405692 DGKZQ13574 1117 aa24.79■■□□□ 1.56
PDGFA-204ENST00000405692 ZNF444Q8N0Y2 327 aaPredicted RBP24.79■■□□□ 1.56
PDGFA-204ENST00000405692 SMCR8Q8TEV9 937 aaPredicted RBP24.79■■□□□ 1.56
PDGFA-204ENST00000405692 SH2D4AQ9H788 454 aa24.79■■□□□ 1.56
PDGFA-204ENST00000405692 ARHGEF10LQ9HCE6 1279 aa24.79■■□□□ 1.56
PDGFA-204ENST00000405692 SMIM22K7EJ46 135 aa24.78■■□□□ 1.56
PDGFA-204ENST00000405692 HSPD1P10809 573 aaKnown RBP24.78■■□□□ 1.56
PDGFA-204ENST00000405692 GUCY1A2P33402 732 aa24.78■■□□□ 1.56
PDGFA-204ENST00000405692 KIF22Q14807 665 aa24.78■■□□□ 1.56
PDGFA-204ENST00000405692 PKN2Q16513 984 aaKnown RBP24.78■■□□□ 1.56
PDGFA-204ENST00000405692 TREML2Q5T2D2 321 aa24.78■■□□□ 1.56
PDGFA-204ENST00000405692 VPS53Q5VIR6 699 aa24.78■■□□□ 1.56
PDGFA-204ENST00000405692 RUFY2Q8WXA3 655 aa24.78■■□□□ 1.56
PDGFA-204ENST00000405692 KANSL2Q9H9L4 492 aa24.78■■□□□ 1.56
PDGFA-204ENST00000405692 ZMYM6O95789 1325 aa24.78■■□□□ 1.56
PDGFA-204ENST00000405692 PTPRFP10586 1907 aa24.78■■□□□ 1.56
PDGFA-204ENST00000405692 CYP2C8P10632 490 aa24.77■■□□□ 1.56
PDGFA-204ENST00000405692 ICA1Q05084 483 aa24.77■■□□□ 1.56
PDGFA-204ENST00000405692 C17orf99Q6UX52 265 aa24.77■■□□□ 1.56
PDGFA-204ENST00000405692 ZNF589Q86UQ0 364 aaPredicted RBP24.77■■□□□ 1.56
PDGFA-204ENST00000405692 STK11IPQ8N1F8 1099 aa24.77■■□□□ 1.56
PDGFA-204ENST00000405692 C12orf42Q96LP6 360 aa24.77■■□□□ 1.56
PDGFA-204ENST00000405692 FOXP2O15409 715 aa24.76■■□□□ 1.55
PDGFA-204ENST00000405692 RASA1P20936 1047 aa24.76■■□□□ 1.55
PDGFA-204ENST00000405692 HOXA7P31268 230 aaPredicted RBP24.76■■□□□ 1.55
PDGFA-204ENST00000405692 IRX3P78415 501 aaPredicted RBP24.76■■□□□ 1.55
PDGFA-204ENST00000405692 CPA4Q9UI42 421 aa24.76■■□□□ 1.55
PDGFA-204ENST00000405692 LOC285556D6RIA3 1793 aa24.75■■□□□ 1.55
PDGFA-204ENST00000405692 MYH8P13535 1937 aa24.75■■□□□ 1.55
PDGFA-204ENST00000405692 FGAP02671 866 aa24.75■■□□□ 1.55
PDGFA-204ENST00000405692 ACER1Q8TDN7 264 aa24.75■■□□□ 1.55
PDGFA-204ENST00000405692 EMILIN3Q9NT22 766 aa24.75■■□□□ 1.55
PDGFA-204ENST00000405692 ANAPC4Q9UJX5 808 aa24.75■■□□□ 1.55
PDGFA-204ENST00000405692 GCLCP48506 637 aaPredicted RBP24.74■■□□□ 1.55
PDGFA-204ENST00000405692 ZYXQ15942 572 aaKnown RBP24.74■■□□□ 1.55
PDGFA-204ENST00000405692 CD99L2Q8TCZ2 262 aa24.74■■□□□ 1.55
PDGFA-204ENST00000405692 MCOLN1Q9GZU1 580 aa24.74■■□□□ 1.55
PDGFA-204ENST00000405692 ASCC2Q9H1I8 757 aaPredicted RBP24.74■■□□□ 1.55
PDGFA-204ENST00000405692 RAD50Q92878 1312 aa24.74■■□□□ 1.55
PDGFA-204ENST00000405692 ADGRA2Q96PE1 1338 aa24.74■■□□□ 1.55
PDGFA-204ENST00000405692 EFCC1Q9HA90 598 aa24.73■■□□□ 1.55
PDGFA-204ENST00000405692 TMX2Q9Y320 296 aa24.73■■□□□ 1.55
PDGFA-204ENST00000405692 USP17L15C9J2P7 530 aa24.72■■□□□ 1.55
PDGFA-204ENST00000405692 USP17L13C9JLJ4 530 aa24.72■■□□□ 1.55
PDGFA-204ENST00000405692 USP17L11C9JVI0 530 aa24.72■■□□□ 1.55
PDGFA-204ENST00000405692 USP17L18D6R9N7 530 aa24.72■■□□□ 1.55
PDGFA-204ENST00000405692 USP17L22D6RA61 530 aa24.72■■□□□ 1.55
PDGFA-204ENST00000405692 USP17L17D6RBQ6 530 aa24.72■■□□□ 1.55
PDGFA-204ENST00000405692 USP17L19D6RCP7 530 aa24.72■■□□□ 1.55
PDGFA-204ENST00000405692 USP17L20D6RJB6 530 aa24.72■■□□□ 1.55
PDGFA-204ENST00000405692 GNRH1P01148 92 aa24.72■■□□□ 1.55
PDGFA-204ENST00000405692 LACTBP83111 547 aaPredicted RBP24.72■■□□□ 1.55
PDGFA-204ENST00000405692 USP17L24Q0WX57 530 aa24.72■■□□□ 1.55
PDGFA-204ENST00000405692 PPP4R3BQ5MIZ7 849 aa24.72■■□□□ 1.55
PDGFA-204ENST00000405692 GTF3C2Q8WUA4 911 aaPredicted RBP24.72■■□□□ 1.55
PDGFA-204ENST00000405692 LPAR1Q92633 364 aa24.72■■□□□ 1.55
PDGFA-204ENST00000405692 DSCC1Q9BVC3 393 aa24.72■■□□□ 1.55
PDGFA-204ENST00000405692 TRIM17Q9Y577 477 aa24.72■■□□□ 1.55
PDGFA-204ENST00000405692 PRDM1O75626 825 aa24.71■■□□□ 1.55
PDGFA-204ENST00000405692 TSPY3P0CV98 308 aa24.71■■□□□ 1.55
PDGFA-204ENST00000405692 TSPY8P0CW00 308 aa24.71■■□□□ 1.55
PDGFA-204ENST00000405692 BCRP11274 1271 aa24.71■■□□□ 1.55
PDGFA-204ENST00000405692 CHMLP26374 656 aa24.71■■□□□ 1.55
PDGFA-204ENST00000405692 ATP2B2Q01814 1243 aa24.71■■□□□ 1.55
PDGFA-204ENST00000405692 A0A1W2PRG0 241 aa24.7■■□□□ 1.54
PDGFA-204ENST00000405692 PCP11498 1178 aaKnown RBP24.7■■□□□ 1.54
PDGFA-204ENST00000405692 EEF2P13639 858 aaKnown RBP24.7■■□□□ 1.54
PDGFA-204ENST00000405692 VCAM1P19320 739 aa24.7■■□□□ 1.54
PDGFA-204ENST00000405692 CTDSPL2Q05D32 466 aa24.7■■□□□ 1.54
PDGFA-204ENST00000405692 OTOP1Q7RTM1 612 aa24.7■■□□□ 1.54
PDGFA-204ENST00000405692 PPP4R2Q9NY27 417 aa24.7■■□□□ 1.54
PDGFA-204ENST00000405692 NYAP2Q9P242 653 aa24.7■■□□□ 1.54
PDGFA-204ENST00000405692 CTNNA3Q9UI47 895 aa24.7■■□□□ 1.54
PDGFA-204ENST00000405692 FAM110CQ1W6H9 321 aa24.69■■□□□ 1.54
PDGFA-204ENST00000405692 FBXO46Q6PJ61 603 aaPredicted RBP24.69■■□□□ 1.54
PDGFA-204ENST00000405692 NEDD1Q8NHV4 660 aa24.69■■□□□ 1.54
PDGFA-204ENST00000405692 VCPKMTQ9H867 229 aa24.69■■□□□ 1.54
PDGFA-204ENST00000405692 GOPCQ9HD26 462 aa24.69■■□□□ 1.54
PDGFA-204ENST00000405692 DDX52Q9Y2R4 599 aaKnown RBP eCLIP24.69■■□□□ 1.54
PDGFA-204ENST00000405692 ZNF213O14771 459 aa24.68■■□□□ 1.54
PDGFA-204ENST00000405692 HOXD10P28358 340 aa24.68■■□□□ 1.54
PDGFA-204ENST00000405692 TFAP4Q01664 338 aa24.68■■□□□ 1.54
PDGFA-204ENST00000405692 BMP2KLQ5H9B9 411 aa24.68■■□□□ 1.54
PDGFA-204ENST00000405692 CATSPERGQ6ZRH7 1159 aa24.68■■□□□ 1.54
PDGFA-204ENST00000405692 SIAH1Q8IUQ4 282 aa24.68■■□□□ 1.54
PDGFA-204ENST00000405692 P2RX7Q99572 595 aaKnown RBP24.68■■□□□ 1.54
PDGFA-204ENST00000405692 GNL3Q9BVP2 549 aaKnown RBP eCLIP24.68■■□□□ 1.54
PDGFA-204ENST00000405692 RNF41Q9H4P4 317 aaPredicted RBP24.68■■□□□ 1.54
PDGFA-204ENST00000405692 RPAP3Q9H6T3 665 aaPredicted RBP24.68■■□□□ 1.54
PDGFA-204ENST00000405692 PLIN4Q96Q06 1357 aa24.67■■□□□ 1.54
PDGFA-204ENST00000405692 TSPY2A6NKD2 308 aa24.67■■□□□ 1.54
PDGFA-204ENST00000405692 ORC4O43929 436 aa24.67■■□□□ 1.54
PDGFA-204ENST00000405692 FGRP09769 529 aa24.67■■□□□ 1.54
PDGFA-204ENST00000405692 NT5C2P49902 561 aa24.67■■□□□ 1.54
PDGFA-204ENST00000405692 HERVK_113P62684 666 aa24.67■■□□□ 1.54
PDGFA-204ENST00000405692 CLEC10AQ8IUN9 316 aa24.67■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms