RNA–Protein interactions for RNA: ENST00000402989.5

SMC6-203, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMC6, Length 3,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-203ENST00000402989 KRT2P35908 639 aa4.98□□□□□ -1.61
SMC6-203ENST00000402989 RPS8P62241 208 aaKnown RBP4.98□□□□□ -1.61
SMC6-203ENST00000402989 E4F1Q66K89 784 aaPredicted RBP4.98□□□□□ -1.61
SMC6-203ENST00000402989 MAPKAPK5Q8IW41 473 aa4.98□□□□□ -1.61
SMC6-203ENST00000402989 SYMPKQ92797 1274 aaKnown RBP4.98□□□□□ -1.61
SMC6-203ENST00000402989 MKNK2Q9HBH9 465 aa4.98□□□□□ -1.61
SMC6-203ENST00000402989 HOOK1Q9UJC3 728 aaKnown RBP4.98□□□□□ -1.61
SMC6-203ENST00000402989 A0A087X0B3 334 aa4.98□□□□□ -1.61
SMC6-203ENST00000402989 USP17L3A6NCW0 530 aa4.98□□□□□ -1.61
SMC6-203ENST00000402989 USP17L4A6NCW7 530 aa4.98□□□□□ -1.61
SMC6-203ENST00000402989 ERCC3P19447 782 aa4.98□□□□□ -1.61
SMC6-203ENST00000402989 CTR9Q6PD62 1173 aa4.98□□□□□ -1.61
SMC6-203ENST00000402989 USP17L1Q7RTZ2 530 aa4.98□□□□□ -1.61
SMC6-203ENST00000402989 AMIGO3Q86WK7 504 aa4.98□□□□□ -1.61
SMC6-203ENST00000402989 SHISA4Q96DD7 197 aa4.98□□□□□ -1.61
SMC6-203ENST00000402989 CRNKL1Q9BZJ0 848 aaKnown RBP4.98□□□□□ -1.61
SMC6-203ENST00000402989 EPC1Q9H2F5 836 aa4.98□□□□□ -1.61
SMC6-203ENST00000402989 BRMS1Q9HCU9 246 aa4.98□□□□□ -1.61
SMC6-203ENST00000402989 FBXO2Q9UK22 296 aaPredicted RBP4.98□□□□□ -1.61
SMC6-203ENST00000402989 COL4A1P02462 1669 aa4.98□□□□□ -1.61
SMC6-203ENST00000402989 PPP6R2O75170 966 aa4.97□□□□□ -1.61
SMC6-203ENST00000402989 EIF6P56537 245 aaKnown RBP4.97□□□□□ -1.61
SMC6-203ENST00000402989 TFAP4Q01664 338 aa4.97□□□□□ -1.61
SMC6-203ENST00000402989 ATP2B2Q01814 1243 aa4.97□□□□□ -1.61
SMC6-203ENST00000402989 PTGDRQ13258 359 aa4.97□□□□□ -1.61
SMC6-203ENST00000402989 ALX1Q15699 326 aa4.97□□□□□ -1.61
SMC6-203ENST00000402989 ERCC6LQ2NKX8 1250 aa4.97□□□□□ -1.61
SMC6-203ENST00000402989 RILPL1Q5EBL4 403 aa4.97□□□□□ -1.61
SMC6-203ENST00000402989 HEATR3Q7Z4Q2 680 aa4.97□□□□□ -1.61
SMC6-203ENST00000402989 CCDC150Q8NCX0 1101 aa4.97□□□□□ -1.61
SMC6-203ENST00000402989 MNS1Q8NEH6 495 aa4.97□□□□□ -1.61
SMC6-203ENST00000402989 ZNF384Q8TF68 577 aa4.97□□□□□ -1.61
SMC6-203ENST00000402989 ZNF512BQ96KM6 892 aaPredicted RBP4.97□□□□□ -1.61
SMC6-203ENST00000402989 LZTFL1Q9NQ48 299 aa4.97□□□□□ -1.61
SMC6-203ENST00000402989 CCNL1Q9UK58 526 aaPredicted RBP4.97□□□□□ -1.61
SMC6-203ENST00000402989 CTNND2Q9UQB3 1225 aa4.97□□□□□ -1.61
SMC6-203ENST00000402989 SRCAPQ6ZRS2 3230 aa4.97□□□□□ -1.61
SMC6-203ENST00000402989 DOT1LQ8TEK3 1739 aa4.97□□□□□ -1.61
SMC6-203ENST00000402989 RTL9Q8NET4 1388 aa4.97□□□□□ -1.61
SMC6-203ENST00000402989 PP2D1A8MPX8 630 aa4.97□□□□□ -1.61
SMC6-203ENST00000402989 CBFA2T2O43439 604 aa4.97□□□□□ -1.61
SMC6-203ENST00000402989 NEMFO60524 1076 aa4.97□□□□□ -1.61
SMC6-203ENST00000402989 RBM6P78332 1123 aaKnown RBP4.97□□□□□ -1.61
SMC6-203ENST00000402989 MTF1Q14872 753 aa4.97□□□□□ -1.61
SMC6-203ENST00000402989 GRIK5Q16478 980 aa4.97□□□□□ -1.61
SMC6-203ENST00000402989 TTC38Q5R3I4 469 aa4.97□□□□□ -1.61
SMC6-203ENST00000402989 MTERF4Q7Z6M4 381 aaKnown RBP4.97□□□□□ -1.61
SMC6-203ENST00000402989 SRBD1Q8N5C6 995 aaKnown RBP4.97□□□□□ -1.61
SMC6-203ENST00000402989 TGFBRAP1Q8WUH2 860 aa4.97□□□□□ -1.61
SMC6-203ENST00000402989 RIOK1Q9BRS2 568 aaKnown RBP4.97□□□□□ -1.61
SMC6-203ENST00000402989 KAT14Q9H8E8 782 aa4.97□□□□□ -1.61
SMC6-203ENST00000402989 MYH14Q7Z406 1995 aaKnown RBP4.97□□□□□ -1.61
SMC6-203ENST00000402989 COL1A1P02452 1464 aaPredicted RBP4.97□□□□□ -1.61
SMC6-203ENST00000402989 WDR19Q8NEZ3 1342 aa4.97□□□□□ -1.61
SMC6-203ENST00000402989 TEX33O43247 280 aa4.97□□□□□ -1.61
SMC6-203ENST00000402989 RFC4P35249 363 aa4.97□□□□□ -1.61
SMC6-203ENST00000402989 GNG11P61952 73 aa4.97□□□□□ -1.61
SMC6-203ENST00000402989 PICALMQ13492 652 aa4.97□□□□□ -1.61
SMC6-203ENST00000402989 NFIXQ14938 502 aa4.97□□□□□ -1.61
SMC6-203ENST00000402989 RRAGBQ5VZM2 374 aa4.97□□□□□ -1.61
SMC6-203ENST00000402989 TMTC2Q8N394 836 aa4.97□□□□□ -1.61
SMC6-203ENST00000402989 STAG2Q8N3U4 1231 aa4.97□□□□□ -1.61
SMC6-203ENST00000402989 VPS16Q9H269 839 aa4.97□□□□□ -1.61
SMC6-203ENST00000402989 CEP131Q9UPN4 1083 aa4.97□□□□□ -1.61
SMC6-203ENST00000402989 HPSEQ9Y251 543 aa4.97□□□□□ -1.61
SMC6-203ENST00000402989 PAXBP1Q9Y5B6 917 aa4.97□□□□□ -1.61
SMC6-203ENST00000402989 COL5A3P25940 1745 aaPredicted RBP4.97□□□□□ -1.61
SMC6-203ENST00000402989 RIMBP2O15034 1052 aa4.96□□□□□ -1.61
SMC6-203ENST00000402989 PTPREP23469 700 aa4.96□□□□□ -1.61
SMC6-203ENST00000402989 UBE4AQ14139 1066 aa4.96□□□□□ -1.61
SMC6-203ENST00000402989 PKN1Q16512 942 aa4.96□□□□□ -1.61
SMC6-203ENST00000402989 TEX35Q5T0J7 233 aa4.96□□□□□ -1.61
SMC6-203ENST00000402989 TOGARAM2Q6ZUX3 1019 aa4.96□□□□□ -1.61
SMC6-203ENST00000402989 FBXL16Q8N461 479 aa4.96□□□□□ -1.61
SMC6-203ENST00000402989 SH3RF3Q8TEJ3 882 aaPredicted RBP4.96□□□□□ -1.61
SMC6-203ENST00000402989 NOL10Q9BSC4 688 aaKnown RBP4.96□□□□□ -1.61
SMC6-203ENST00000402989 IRX2Q9BZI1 471 aaPredicted RBP4.96□□□□□ -1.61
SMC6-203ENST00000402989 HSD3B7Q9H2F3 369 aa4.96□□□□□ -1.61
SMC6-203ENST00000402989 DCP1AQ9NPI6 582 aaPredicted RBP4.96□□□□□ -1.61
SMC6-203ENST00000402989 BSDC1Q9NW68 430 aaPredicted RBP4.96□□□□□ -1.61
SMC6-203ENST00000402989 ZNF219Q9P2Y4 722 aaPredicted RBP4.96□□□□□ -1.61
SMC6-203ENST00000402989 SBF2Q86WG5 1849 aa4.96□□□□□ -1.62
SMC6-203ENST00000402989 MYH13Q9UKX3 1938 aa4.96□□□□□ -1.62
SMC6-203ENST00000402989 ZNF804BA4D1E1 1349 aa4.96□□□□□ -1.62
SMC6-203ENST00000402989 PNPLA7Q6ZV29 1317 aa4.96□□□□□ -1.62
SMC6-203ENST00000402989 SYNRGQ9UMZ2 1314 aa4.96□□□□□ -1.62
SMC6-203ENST00000402989 SLU7O95391 586 aaKnown RBP4.96□□□□□ -1.62
SMC6-203ENST00000402989 TSPY3P0CV98 308 aa4.96□□□□□ -1.62
SMC6-203ENST00000402989 TSPY8P0CW00 308 aa4.96□□□□□ -1.62
SMC6-203ENST00000402989 SEC23AQ15436 765 aa4.96□□□□□ -1.62
SMC6-203ENST00000402989 PPFIBP1Q86W92 1011 aa4.96□□□□□ -1.62
SMC6-203ENST00000402989 SMARCC1Q92922 1105 aaPredicted RBP4.96□□□□□ -1.62
SMC6-203ENST00000402989 NSUN4Q96CB9 384 aaKnown RBP4.96□□□□□ -1.62
SMC6-203ENST00000402989 CARD6Q9BX69 1037 aa4.96□□□□□ -1.62
SMC6-203ENST00000402989 FOXP1Q9H334 677 aaPredicted RBP4.96□□□□□ -1.62
SMC6-203ENST00000402989 ST7Q9NRC1 585 aa4.96□□□□□ -1.62
SMC6-203ENST00000402989 INTS13Q9NVM9 706 aa4.96□□□□□ -1.62
SMC6-203ENST00000402989 TAB2Q9NYJ8 693 aa4.96□□□□□ -1.62
SMC6-203ENST00000402989 TUBE1Q9UJT0 475 aa4.96□□□□□ -1.62
SMC6-203ENST00000402989 RTCBQ9Y3I0 505 aaKnown RBP4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms