RNA–Protein interactions for RNA: ENST00000401884.5

SNED1-204, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SNED1, Length 4,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-204ENST00000401884 ERCC3P19447 782 aa19.82■□□□□ 0.76
SNED1-204ENST00000401884 CDC25BP30305 580 aa19.82■□□□□ 0.76
SNED1-204ENST00000401884 TUBB2AQ13885 445 aa19.82■□□□□ 0.76
SNED1-204ENST00000401884 TUBB2BQ9BVA1 445 aa19.82■□□□□ 0.76
SNED1-204ENST00000401884 OVOS2A0A0J9YW53 1432 aa19.82■□□□□ 0.76
SNED1-204ENST00000401884 OVOS2Q6IE36 1432 aa19.82■□□□□ 0.76
SNED1-204ENST00000401884 TBC1D5Q92609 795 aa19.82■□□□□ 0.76
SNED1-204ENST00000401884 PPP2R2CQ9Y2T4 447 aa19.82■□□□□ 0.76
SNED1-204ENST00000401884 PSDA5PKW4 1024 aaPredicted RBP19.81■□□□□ 0.76
SNED1-204ENST00000401884 SCG2P13521 617 aa19.81■□□□□ 0.76
SNED1-204ENST00000401884 NR5A1Q13285 461 aa19.81■□□□□ 0.76
SNED1-204ENST00000401884 RNF187Q5TA31 235 aaPredicted RBP19.81■□□□□ 0.76
SNED1-204ENST00000401884 BLIDQ8IZY5 108 aa19.81■□□□□ 0.76
SNED1-204ENST00000401884 FOXP1Q9H334 677 aaPredicted RBP19.81■□□□□ 0.76
SNED1-204ENST00000401884 RSPH14Q9UHP6 348 aa19.81■□□□□ 0.76
SNED1-204ENST00000401884 SH2B2O14492 632 aaPredicted RBP19.81■□□□□ 0.76
SNED1-204ENST00000401884 VAV2P52735 878 aa19.81■□□□□ 0.76
SNED1-204ENST00000401884 UBE4AQ14139 1066 aa19.81■□□□□ 0.76
SNED1-204ENST00000401884 KIAA0753Q2KHM9 967 aa19.81■□□□□ 0.76
SNED1-204ENST00000401884 DYMQ7RTS9 669 aa19.81■□□□□ 0.76
SNED1-204ENST00000401884 TAOK3Q9H2K8 898 aa19.81■□□□□ 0.76
SNED1-204ENST00000401884 CABP7Q86V35 215 aa19.81■□□□□ 0.76
SNED1-204ENST00000401884 IKBKBO14920 756 aa19.81■□□□□ 0.76
SNED1-204ENST00000401884 CRKLP46109 303 aaKnown RBP19.81■□□□□ 0.76
SNED1-204ENST00000401884 SNX29Q8TEQ0 813 aa19.81■□□□□ 0.76
SNED1-204ENST00000401884 RNF26Q9BY78 433 aaPredicted RBP19.81■□□□□ 0.76
SNED1-204ENST00000401884 REXO1Q8N1G1 1221 aaKnown RBP19.8■□□□□ 0.76
SNED1-204ENST00000401884 OGFOD1Q8N543 542 aa19.8■□□□□ 0.76
SNED1-204ENST00000401884 MCAMP43121 646 aa19.8■□□□□ 0.76
SNED1-204ENST00000401884 SPATA1Q5VX52 437 aa19.8■□□□□ 0.76
SNED1-204ENST00000401884 LZTS2Q9BRK4 669 aa19.8■□□□□ 0.76
SNED1-204ENST00000401884 NUP58Q9BVL2 599 aa19.8■□□□□ 0.76
SNED1-204ENST00000401884 PIH1D3Q9NQM4 214 aaKnown RBP19.8■□□□□ 0.76
SNED1-204ENST00000401884 KIDINS220Q9ULH0 1771 aa19.8■□□□□ 0.76
SNED1-204ENST00000401884 KRT13P13646 458 aa19.8■□□□□ 0.76
SNED1-204ENST00000401884 LMTK3Q96Q04 1460 aa19.79■□□□□ 0.76
SNED1-204ENST00000401884 LIFRP42702 1097 aa19.79■□□□□ 0.76
SNED1-204ENST00000401884 RAPGEF1Q13905 1077 aa19.79■□□□□ 0.76
SNED1-204ENST00000401884 TICAM2Q86XR7 235 aa19.79■□□□□ 0.76
SNED1-204ENST00000401884 CSRNP2Q9H175 543 aa19.79■□□□□ 0.76
SNED1-204ENST00000401884 NRKQ7Z2Y5 1582 aa19.79■□□□□ 0.76
SNED1-204ENST00000401884 OPA1O60313 960 aa19.79■□□□□ 0.76
SNED1-204ENST00000401884 FMNL1O95466 1100 aaPredicted RBP19.79■□□□□ 0.76
SNED1-204ENST00000401884 OR8K1Q8NGG5 319 aa19.79■□□□□ 0.76
SNED1-204ENST00000401884 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.79■□□□□ 0.76
SNED1-204ENST00000401884 SYMPKQ92797 1274 aaKnown RBP19.79■□□□□ 0.76
SNED1-204ENST00000401884 JAKMIP2Q96AA8 810 aa19.79■□□□□ 0.76
SNED1-204ENST00000401884 DIP2CQ9Y2E4 1556 aa19.79■□□□□ 0.76
SNED1-204ENST00000401884 FAM13AO94988 1023 aa19.79■□□□□ 0.76
SNED1-204ENST00000401884 INF2Q27J81 1249 aa19.79■□□□□ 0.76
SNED1-204ENST00000401884 CCDC174Q6PII3 467 aa19.79■□□□□ 0.76
SNED1-204ENST00000401884 CERS3Q8IU89 383 aa19.79■□□□□ 0.76
SNED1-204ENST00000401884 RBM17Q96I25 401 aaKnown RBP19.79■□□□□ 0.76
SNED1-204ENST00000401884 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.79■□□□□ 0.76
SNED1-204ENST00000401884 IVLP07476 585 aa19.79■□□□□ 0.76
SNED1-204ENST00000401884 GABPB1Q06547 395 aaPredicted RBP19.79■□□□□ 0.76
SNED1-204ENST00000401884 LCORLQ8N3X6 602 aa19.79■□□□□ 0.76
SNED1-204ENST00000401884 GOLGA6L10A0A0M3HER8 536 aa19.78■□□□□ 0.76
SNED1-204ENST00000401884 SMCO2A6NFE2 343 aa19.78■□□□□ 0.76
SNED1-204ENST00000401884 PTPN21Q16825 1174 aa19.78■□□□□ 0.76
SNED1-204ENST00000401884 CDC42BPGQ6DT37 1551 aa19.78■□□□□ 0.76
SNED1-204ENST00000401884 MICALCLQ6ZW33 695 aa19.78■□□□□ 0.76
SNED1-204ENST00000401884 DLC1Q96QB1 1528 aa19.78■□□□□ 0.76
SNED1-204ENST00000401884 DDIT3P35638 169 aa19.78■□□□□ 0.76
SNED1-204ENST00000401884 RASGRF1Q13972 1273 aa19.78■□□□□ 0.76
SNED1-204ENST00000401884 GPIHBP1Q8IV16 184 aa19.78■□□□□ 0.76
SNED1-204ENST00000401884 SYNE4Q8N205 404 aa19.78■□□□□ 0.76
SNED1-204ENST00000401884 CCDC51Q96ER9 411 aa19.78■□□□□ 0.76
SNED1-204ENST00000401884 SNAP23O00161 211 aa19.78■□□□□ 0.76
SNED1-204ENST00000401884 HERC4Q5GLZ8 1057 aaPredicted RBP19.78■□□□□ 0.76
SNED1-204ENST00000401884 DCAF17Q5H9S7 520 aaPredicted RBP19.78■□□□□ 0.76
SNED1-204ENST00000401884 IFT81Q8WYA0 676 aa19.78■□□□□ 0.76
SNED1-204ENST00000401884 STRBPQ96SI9 672 aaKnown RBP19.78■□□□□ 0.76
SNED1-204ENST00000401884 TSGA10Q9BZW7 698 aa19.78■□□□□ 0.76
SNED1-204ENST00000401884 STX10O60499 249 aa19.77■□□□□ 0.76
SNED1-204ENST00000401884 HLFQ16534 295 aa19.77■□□□□ 0.76
SNED1-204ENST00000401884 TSGA10IPQ3SY00 556 aa19.77■□□□□ 0.76
SNED1-204ENST00000401884 DHX37Q8IY37 1157 aaKnown RBP19.77■□□□□ 0.76
SNED1-204ENST00000401884 EYA3Q99504 573 aa19.77■□□□□ 0.76
SNED1-204ENST00000401884 RPL13P26373 211 aaKnown RBP19.77■□□□□ 0.76
SNED1-204ENST00000401884 MAGEA1P43355 309 aa19.77■□□□□ 0.76
SNED1-204ENST00000401884 GPKOWQ92917 476 aaPredicted RBP eCLIP19.77■□□□□ 0.76
SNED1-204ENST00000401884 USP42Q9H9J4 1324 aaKnown RBP19.77■□□□□ 0.76
SNED1-204ENST00000401884 PPP4R3AQ6IN85 833 aa19.77■□□□□ 0.76
SNED1-204ENST00000401884 LMBR1Q8WVP7 490 aa19.77■□□□□ 0.76
SNED1-204ENST00000401884 CCDC84Q86UT8 332 aaPredicted RBP19.77■□□□□ 0.75
SNED1-204ENST00000401884 KCNJ18B7U540 433 aa19.76■□□□□ 0.75
SNED1-204ENST00000401884 MMP1P03956 469 aa19.76■□□□□ 0.75
SNED1-204ENST00000401884 ADCY7P51828 1080 aa19.76■□□□□ 0.75
SNED1-204ENST00000401884 KCNJ12Q14500 433 aa19.76■□□□□ 0.75
SNED1-204ENST00000401884 CALCRLQ16602 461 aa19.76■□□□□ 0.75
SNED1-204ENST00000401884 FCHSD1Q86WN1 690 aa19.76■□□□□ 0.75
SNED1-204ENST00000401884 EEF2KMTQ96G04 330 aa19.76■□□□□ 0.75
SNED1-204ENST00000401884 GSDMAQ96QA5 445 aa19.76■□□□□ 0.75
SNED1-204ENST00000401884 UIMC1Q96RL1 719 aa19.76■□□□□ 0.75
SNED1-204ENST00000401884 KLRF2D3W0D1 207 aa19.76■□□□□ 0.75
SNED1-204ENST00000401884 CETN3O15182 167 aa19.76■□□□□ 0.75
SNED1-204ENST00000401884 PCP11498 1178 aaKnown RBP19.76■□□□□ 0.75
SNED1-204ENST00000401884 ATP1A3P13637 1013 aa19.76■□□□□ 0.75
SNED1-204ENST00000401884 MAP2K1Q02750 393 aaPredicted RBP19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms