RNA–Protein interactions for RNA: ENST00000400555.7

PPP4R1-202, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-202ENST00000400555 GDAP1L1Q96MZ0 367 aa14.37□□□□□ -0.11
PPP4R1-202ENST00000400555 BPIFA3Q9BQP9 254 aa14.37□□□□□ -0.11
PPP4R1-202ENST00000400555 RIC1Q4ADV7 1423 aa14.37□□□□□ -0.11
PPP4R1-202ENST00000400555 ATP2B2Q01814 1243 aa14.37□□□□□ -0.11
PPP4R1-202ENST00000400555 A0A087X0B3 334 aa14.37□□□□□ -0.11
PPP4R1-202ENST00000400555 CCDC194A0A1B0GVG4 234 aa14.37□□□□□ -0.11
PPP4R1-202ENST00000400555 PRDX5P30044 214 aa14.37□□□□□ -0.11
PPP4R1-202ENST00000400555 DNA2P51530 1060 aa14.37□□□□□ -0.11
PPP4R1-202ENST00000400555 C3orf67Q6ZVT6 689 aa14.37□□□□□ -0.11
PPP4R1-202ENST00000400555 CELF1Q92879 486 aaKnown RBP14.37□□□□□ -0.11
PPP4R1-202ENST00000400555 DYNLL2Q96FJ2 89 aa14.37□□□□□ -0.11
PPP4R1-202ENST00000400555 FOXP1Q9H334 677 aaPredicted RBP14.37□□□□□ -0.11
PPP4R1-202ENST00000400555 PP2D1A8MPX8 630 aa14.36□□□□□ -0.11
PPP4R1-202ENST00000400555 TXLNAP40222 546 aa14.36□□□□□ -0.11
PPP4R1-202ENST00000400555 STAT6P42226 847 aa14.36□□□□□ -0.11
PPP4R1-202ENST00000400555 UBXN1Q04323 297 aa14.36□□□□□ -0.11
PPP4R1-202ENST00000400555 KANK3Q6NY19 840 aa14.36□□□□□ -0.11
PPP4R1-202ENST00000400555 KLHL34Q8N239 644 aa14.36□□□□□ -0.11
PPP4R1-202ENST00000400555 PAGE5Q96GU1 130 aa14.36□□□□□ -0.11
PPP4R1-202ENST00000400555 SRPRBQ9Y5M8 271 aaKnown RBP14.36□□□□□ -0.11
PPP4R1-202ENST00000400555 CD44P16070 742 aaKnown RBP14.36□□□□□ -0.11
PPP4R1-202ENST00000400555 EIF5P55010 431 aaKnown RBP14.36□□□□□ -0.11
PPP4R1-202ENST00000400555 CAPZA3Q96KX2 299 aa14.36□□□□□ -0.11
PPP4R1-202ENST00000400555 KAT14Q9H8E8 782 aa14.36□□□□□ -0.11
PPP4R1-202ENST00000400555 MRPL44Q9H9J2 332 aaKnown RBP14.36□□□□□ -0.11
PPP4R1-202ENST00000400555 CDHR2Q9BYE9 1310 aa14.36□□□□□ -0.11
PPP4R1-202ENST00000400555 MARCH6O60337 910 aa14.36□□□□□ -0.11
PPP4R1-202ENST00000400555 USP17L8P0C7I0 530 aa14.36□□□□□ -0.11
PPP4R1-202ENST00000400555 FAM193AP78312 1265 aa14.36□□□□□ -0.11
PPP4R1-202ENST00000400555 NBPF5PQ86XG9 351 aaPredicted RBP14.36□□□□□ -0.11
PPP4R1-202ENST00000400555 REXO1L1PQ8IX06 675 aa14.36□□□□□ -0.11
PPP4R1-202ENST00000400555 DRC1Q96MC2 740 aa14.36□□□□□ -0.11
PPP4R1-202ENST00000400555 ZNF446Q9NWS9 450 aa14.36□□□□□ -0.11
PPP4R1-202ENST00000400555 GDAQ9Y2T3 454 aa14.36□□□□□ -0.11
PPP4R1-202ENST00000400555 UBA7P41226 1012 aa14.35□□□□□ -0.11
PPP4R1-202ENST00000400555 ENOX2Q16206 610 aaKnown RBP14.35□□□□□ -0.11
PPP4R1-202ENST00000400555 FKBP15Q5T1M5 1219 aa14.35□□□□□ -0.11
PPP4R1-202ENST00000400555 WWC2Q6AWC2 1192 aa14.35□□□□□ -0.11
PPP4R1-202ENST00000400555 TC2NQ8N9U0 490 aa14.35□□□□□ -0.11
PPP4R1-202ENST00000400555 NEK11Q8NG66 645 aa14.35□□□□□ -0.11
PPP4R1-202ENST00000400555 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.35□□□□□ -0.11
PPP4R1-202ENST00000400555 TFR2Q9UP52 801 aa14.35□□□□□ -0.11
PPP4R1-202ENST00000400555 PLCD1P51178 756 aa14.35□□□□□ -0.11
PPP4R1-202ENST00000400555 TFAP4Q01664 338 aa14.35□□□□□ -0.11
PPP4R1-202ENST00000400555 STAG1Q8WVM7 1258 aa14.35□□□□□ -0.11
PPP4R1-202ENST00000400555 ARFGAP3Q9NP61 516 aa14.35□□□□□ -0.11
PPP4R1-202ENST00000400555 PNMA6AP0CW24 399 aaPredicted RBP14.35□□□□□ -0.11
PPP4R1-202ENST00000400555 CUL4BQ13620 913 aa14.35□□□□□ -0.11
PPP4R1-202ENST00000400555 ZNF34Q8IZ26 560 aa14.35□□□□□ -0.11
PPP4R1-202ENST00000400555 CCDC102AQ96A19 550 aa14.35□□□□□ -0.11
PPP4R1-202ENST00000400555 SRP68Q9UHB9 627 aaKnown RBP14.35□□□□□ -0.11
PPP4R1-202ENST00000400555 KRT9P35527 623 aa14.34□□□□□ -0.11
PPP4R1-202ENST00000400555 CCDC178Q5BJE1 867 aa14.34□□□□□ -0.11
PPP4R1-202ENST00000400555 IQUBQ8NA54 791 aa14.34□□□□□ -0.11
PPP4R1-202ENST00000400555 TRIM47Q96LD4 638 aa14.34□□□□□ -0.11
PPP4R1-202ENST00000400555 CRNKL1Q9BZJ0 848 aaKnown RBP14.34□□□□□ -0.11
PPP4R1-202ENST00000400555 ZNF652Q9Y2D9 606 aa14.34□□□□□ -0.11
PPP4R1-202ENST00000400555 TRIM49BA6NDI0 452 aa14.34□□□□□ -0.11
PPP4R1-202ENST00000400555 ENC1O14682 589 aa14.34□□□□□ -0.11
PPP4R1-202ENST00000400555 SSBP05455 408 aaKnown RBP eCLIP14.34□□□□□ -0.11
PPP4R1-202ENST00000400555 TNNT3P45378 269 aaPredicted RBP14.34□□□□□ -0.11
PPP4R1-202ENST00000400555 ITPK1Q13572 414 aa14.34□□□□□ -0.11
PPP4R1-202ENST00000400555 SLC44A5Q8NCS7 719 aa14.34□□□□□ -0.11
PPP4R1-202ENST00000400555 FAM170AA1A519 330 aa14.34□□□□□ -0.11
PPP4R1-202ENST00000400555 FGFR2P21802 821 aa14.34□□□□□ -0.11
PPP4R1-202ENST00000400555 ENOX1Q8TC92 643 aaKnown RBP14.34□□□□□ -0.11
PPP4R1-202ENST00000400555 MORC2Q9Y6X9 1032 aaPredicted RBP14.34□□□□□ -0.11
PPP4R1-202ENST00000400555 ABCC12Q96J65 1359 aa14.33□□□□□ -0.11
PPP4R1-202ENST00000400555 EIF6P56537 245 aaKnown RBP14.33□□□□□ -0.12
PPP4R1-202ENST00000400555 TERF2Q15554 542 aa14.33□□□□□ -0.12
PPP4R1-202ENST00000400555 DIXDC1Q155Q3 683 aa14.33□□□□□ -0.12
PPP4R1-202ENST00000400555 JAKMIP3Q5VZ66 844 aa14.33□□□□□ -0.12
PPP4R1-202ENST00000400555 TRIM65Q6PJ69 517 aa14.33□□□□□ -0.12
PPP4R1-202ENST00000400555 CAGE1Q8TC20 777 aa14.33□□□□□ -0.12
PPP4R1-202ENST00000400555 NELFBQ8WX92 580 aa14.33□□□□□ -0.12
PPP4R1-202ENST00000400555 MAGEC2Q9UBF1 373 aaPredicted RBP14.33□□□□□ -0.12
PPP4R1-202ENST00000400555 USP17L3A6NCW0 530 aa14.33□□□□□ -0.12
PPP4R1-202ENST00000400555 USP17L4A6NCW7 530 aa14.33□□□□□ -0.12
PPP4R1-202ENST00000400555 ZBTB22O15209 634 aa14.33□□□□□ -0.12
PPP4R1-202ENST00000400555 INF2Q27J81 1249 aa14.33□□□□□ -0.12
PPP4R1-202ENST00000400555 USP17L1Q7RTZ2 530 aa14.33□□□□□ -0.12
PPP4R1-202ENST00000400555 ZNF444Q8N0Y2 327 aaPredicted RBP14.33□□□□□ -0.12
PPP4R1-202ENST00000400555 FBXL16Q8N461 479 aa14.33□□□□□ -0.12
PPP4R1-202ENST00000400555 RTL9Q8NET4 1388 aa14.33□□□□□ -0.12
PPP4R1-202ENST00000400555 ACTN4O43707 911 aaKnown RBP14.33□□□□□ -0.12
PPP4R1-202ENST00000400555 LMAN1P49257 510 aa14.33□□□□□ -0.12
PPP4R1-202ENST00000400555 MORC3Q14149 939 aa14.33□□□□□ -0.12
PPP4R1-202ENST00000400555 SYCP1Q15431 976 aa14.33□□□□□ -0.12
PPP4R1-202ENST00000400555 ALX1Q15699 326 aa14.33□□□□□ -0.12
PPP4R1-202ENST00000400555 SPATA1Q5VX52 437 aa14.33□□□□□ -0.12
PPP4R1-202ENST00000400555 RAD9BQ6WBX8 426 aa14.33□□□□□ -0.12
PPP4R1-202ENST00000400555 SRBD1Q8N5C6 995 aaKnown RBP14.33□□□□□ -0.12
PPP4R1-202ENST00000400555 PARD6BQ9BYG5 372 aa14.33□□□□□ -0.12
PPP4R1-202ENST00000400555 STX10O60499 249 aa14.32□□□□□ -0.12
PPP4R1-202ENST00000400555 SLFN14P0C7P3 912 aa14.32□□□□□ -0.12
PPP4R1-202ENST00000400555 HIBADHP31937 336 aaKnown RBP14.32□□□□□ -0.12
PPP4R1-202ENST00000400555 MATR3P43243 847 aaKnown RBP eCLIP14.32□□□□□ -0.125e-7■■■■□ 25.2
PPP4R1-202ENST00000400555 NAP1L1P55209 391 aaKnown RBP14.32□□□□□ -0.12
PPP4R1-202ENST00000400555 MECOMQ03112 1051 aa14.32□□□□□ -0.12
PPP4R1-202ENST00000400555 KIAA1328Q86T90 577 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms