RNA–Protein interactions for RNA: ENST00000400337.6

COL18A1-204, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL18A1, Length 5,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-204ENST00000400337 SIK1P57059 783 aa20.28■□□□□ 0.84
COL18A1-204ENST00000400337 CFAP58Q5T655 872 aa20.28■□□□□ 0.84
COL18A1-204ENST00000400337 ROBO2Q9HCK4 1378 aa20.28■□□□□ 0.84
COL18A1-204ENST00000400337 FERP16591 822 aa20.28■□□□□ 0.84
COL18A1-204ENST00000400337 TMTC1Q8IUR5 882 aa20.28■□□□□ 0.84
COL18A1-204ENST00000400337 SREK1Q8WXA9 508 aaKnown RBP20.28■□□□□ 0.84
COL18A1-204ENST00000400337 STK24Q9Y6E0 443 aa20.28■□□□□ 0.84
COL18A1-204ENST00000400337 EXOC7Q9UPT5 735 aa20.27■□□□□ 0.84
COL18A1-204ENST00000400337 ATP7BP35670 1465 aa20.27■□□□□ 0.84
COL18A1-204ENST00000400337 ZMYM6O95789 1325 aa20.27■□□□□ 0.84
COL18A1-204ENST00000400337 ARHGAP6O43182 974 aa20.27■□□□□ 0.84
COL18A1-204ENST00000400337 ZBED4O75132 1171 aa20.27■□□□□ 0.84
COL18A1-204ENST00000400337 SLC9C1Q4G0N8 1177 aa20.27■□□□□ 0.84
COL18A1-204ENST00000400337 C6orf163Q5TEZ5 329 aa20.27■□□□□ 0.84
COL18A1-204ENST00000400337 FBF1Q8TES7 1133 aa20.27■□□□□ 0.84
COL18A1-204ENST00000400337 RRAGDQ9NQL2 400 aaPredicted RBP20.27■□□□□ 0.84
COL18A1-204ENST00000400337 KIAA1468Q9P260 1216 aa20.27■□□□□ 0.84
COL18A1-204ENST00000400337 MAP3K9P80192 1104 aa20.27■□□□□ 0.84
COL18A1-204ENST00000400337 STRN3Q13033 797 aa20.27■□□□□ 0.84
COL18A1-204ENST00000400337 RASEFQ8IZ41 740 aa20.27■□□□□ 0.84
COL18A1-204ENST00000400337 OTUD6BQ8N6M0 293 aa20.27■□□□□ 0.84
COL18A1-204ENST00000400337 ADCY9O60503 1353 aa20.27■□□□□ 0.84
COL18A1-204ENST00000400337 PABPN1LA6NDY0 278 aaKnown RBP20.27■□□□□ 0.83
COL18A1-204ENST00000400337 GCNT3O95395 438 aa20.27■□□□□ 0.83
COL18A1-204ENST00000400337 ADCK5Q3MIX3 580 aa20.27■□□□□ 0.83
COL18A1-204ENST00000400337 KDM5CP41229 1560 aa20.26■□□□□ 0.83
COL18A1-204ENST00000400337 STX10O60499 249 aa20.26■□□□□ 0.83
COL18A1-204ENST00000400337 HDXQ7Z353 690 aa20.26■□□□□ 0.83
COL18A1-204ENST00000400337 PNMA1Q8ND90 353 aa20.26■□□□□ 0.83
COL18A1-204ENST00000400337 CARD6Q9BX69 1037 aa20.26■□□□□ 0.83
COL18A1-204ENST00000400337 XPO4Q9C0E2 1151 aaKnown RBP20.26■□□□□ 0.83
COL18A1-204ENST00000400337 RIOK3O14730 519 aaKnown RBP20.26■□□□□ 0.83
COL18A1-204ENST00000400337 USPL1Q5W0Q7 1092 aa20.26■□□□□ 0.83
COL18A1-204ENST00000400337 MSL1Q68DK7 614 aa20.26■□□□□ 0.83
COL18A1-204ENST00000400337 BLIDQ8IZY5 108 aa20.26■□□□□ 0.83
COL18A1-204ENST00000400337 CCDC63Q8NA47 563 aa20.26■□□□□ 0.83
COL18A1-204ENST00000400337 CCDC26Q8TAB7 109 aa20.26■□□□□ 0.83
COL18A1-204ENST00000400337 MAP4K1Q92918 833 aa20.26■□□□□ 0.83
COL18A1-204ENST00000400337 ABCA8O94911 1581 aa20.26■□□□□ 0.83
COL18A1-204ENST00000400337 U2AF2P26368 475 aaKnown RBP eCLIP20.26■□□□□ 0.832e-6■□□□□ 9.6
COL18A1-204ENST00000400337 KIFC2Q96AC6 838 aa20.26■□□□□ 0.83
COL18A1-204ENST00000400337 MRPL44Q9H9J2 332 aaKnown RBP20.26■□□□□ 0.83
COL18A1-204ENST00000400337 ZNF521Q96K83 1311 aa20.26■□□□□ 0.83
COL18A1-204ENST00000400337 SYNMO15061 1565 aa20.26■□□□□ 0.83
COL18A1-204ENST00000400337 EXOC3O60645 756 aa20.26■□□□□ 0.83
COL18A1-204ENST00000400337 DKC1O60832 514 aaKnown RBP eCLIP20.26■□□□□ 0.833e-7■■■■■ 50.4
COL18A1-204ENST00000400337 USP6P35125 1406 aa20.26■□□□□ 0.83
COL18A1-204ENST00000400337 NIM1KQ8IY84 436 aa20.26■□□□□ 0.83
COL18A1-204ENST00000400337 UBLCP1Q8WVY7 318 aaPredicted RBP20.26■□□□□ 0.83
COL18A1-204ENST00000400337 SECISBP2LQ93073 1101 aaKnown RBP20.26■□□□□ 0.83
COL18A1-204ENST00000400337 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.26■□□□□ 0.83
COL18A1-204ENST00000400337 NOP56O00567 594 aaKnown RBP20.25■□□□□ 0.83
COL18A1-204ENST00000400337 CRKLP46109 303 aaKnown RBP20.25■□□□□ 0.83
COL18A1-204ENST00000400337 UTP14CQ5TAP6 766 aaKnown RBP20.25■□□□□ 0.83
COL18A1-204ENST00000400337 ZNF408Q9H9D4 720 aa20.25■□□□□ 0.83
COL18A1-204ENST00000400337 NLRP1Q9C000 1473 aa20.25■□□□□ 0.83
COL18A1-204ENST00000400337 ZBTB1Q9Y2K1 713 aa20.25■□□□□ 0.83
COL18A1-204ENST00000400337 NOX5Q96PH1 765 aa20.25■□□□□ 0.83
COL18A1-204ENST00000400337 GINS2Q9Y248 185 aa20.25■□□□□ 0.83
COL18A1-204ENST00000400337 PDIA3P30101 505 aaKnown RBP20.25■□□□□ 0.83
COL18A1-204ENST00000400337 MAGEA1P43355 309 aa20.25■□□□□ 0.83
COL18A1-204ENST00000400337 KDM5DQ9BY66 1539 aa20.25■□□□□ 0.83
COL18A1-204ENST00000400337 TARBP1Q13395 1621 aaKnown RBP20.25■□□□□ 0.83
COL18A1-204ENST00000400337 FRMPD2Q68DX3 1309 aaPredicted RBP20.25■□□□□ 0.83
COL18A1-204ENST00000400337 BTBD18B2RXH4 712 aa20.24■□□□□ 0.83
COL18A1-204ENST00000400337 UBE3CQ15386 1083 aa20.24■□□□□ 0.83
COL18A1-204ENST00000400337 ARFGAP2Q8N6H7 521 aa20.24■□□□□ 0.83
COL18A1-204ENST00000400337 CCDC94Q9BW85 323 aaPredicted RBP20.24■□□□□ 0.83
COL18A1-204ENST00000400337 CARD10Q9BWT7 1032 aa20.24■□□□□ 0.83
COL18A1-204ENST00000400337 RGS12O14924 1447 aa20.24■□□□□ 0.83
COL18A1-204ENST00000400337 GOLGA8HP0CJ92 632 aa20.24■□□□□ 0.83
COL18A1-204ENST00000400337 PDE6BP35913 854 aa20.24■□□□□ 0.83
COL18A1-204ENST00000400337 C8orf74Q6P047 294 aa20.24■□□□□ 0.83
COL18A1-204ENST00000400337 CHAMP1Q96JM3 812 aa20.24■□□□□ 0.83
COL18A1-204ENST00000400337 TTC14Q96N46 770 aa20.24■□□□□ 0.83
COL18A1-204ENST00000400337 SLF1Q9BQI6 1058 aa20.24■□□□□ 0.83
COL18A1-204ENST00000400337 PRR36Q9H6K5 1346 aa20.24■□□□□ 0.83
COL18A1-204ENST00000400337 ATP2B4P23634 1241 aa20.24■□□□□ 0.83
COL18A1-204ENST00000400337 SCNN1DP51172 638 aa20.24■□□□□ 0.83
COL18A1-204ENST00000400337 CFAP74Q9C0B2 1584 aa20.24■□□□□ 0.83
COL18A1-204ENST00000400337 TRPC3Q13507 836 aa20.24■□□□□ 0.83
COL18A1-204ENST00000400337 MAK16Q9BXY0 300 aaKnown RBP20.24■□□□□ 0.83
COL18A1-204ENST00000400337 SSX2IPQ9Y2D8 614 aa20.24■□□□□ 0.83
COL18A1-204ENST00000400337 SCRN1Q12765 414 aa20.24■□□□□ 0.83
COL18A1-204ENST00000400337 INF2Q27J81 1249 aa20.24■□□□□ 0.83
COL18A1-204ENST00000400337 NAP1L3Q99457 506 aaPredicted RBP20.24■□□□□ 0.83
COL18A1-204ENST00000400337 OSBPL3Q9H4L5 887 aa20.24■□□□□ 0.83
COL18A1-204ENST00000400337 KCNK9Q9NPC2 374 aa20.24■□□□□ 0.83
COL18A1-204ENST00000400337 ATP8A2Q9NTI2 1148 aa20.24■□□□□ 0.83
COL18A1-204ENST00000400337 MXRA7P84157 204 aa20.23■□□□□ 0.83
COL18A1-204ENST00000400337 NBPF11Q86T75 865 aa20.23■□□□□ 0.83
COL18A1-204ENST00000400337 DOK7Q18PE1 504 aa20.23■□□□□ 0.83
COL18A1-204ENST00000400337 TPH2Q8IWU9 490 aa20.23■□□□□ 0.83
COL18A1-204ENST00000400337 LRRC47Q8N1G4 583 aaKnown RBP20.23■□□□□ 0.83
COL18A1-204ENST00000400337 ANKS4BQ8N8V4 417 aa20.23■□□□□ 0.83
COL18A1-204ENST00000400337 KLRF2D3W0D1 207 aa20.23■□□□□ 0.83
COL18A1-204ENST00000400337 CIAO1O76071 339 aa20.23■□□□□ 0.83
COL18A1-204ENST00000400337 ARL1P40616 181 aaPredicted RBP20.23■□□□□ 0.83
COL18A1-204ENST00000400337 BTDP43251 543 aa20.23■□□□□ 0.83
COL18A1-204ENST00000400337 NT5C3AQ9H0P0 336 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms