RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 CDC27P30260 824 aa15.91■□□□□ 0.14
SCAF4-202ENST00000399804 PNOCQ13519 176 aa15.91■□□□□ 0.14
SCAF4-202ENST00000399804 TTLL12Q14166 644 aaPredicted RBP15.91■□□□□ 0.14
SCAF4-202ENST00000399804 TMEM87AQ8NBN3 555 aa15.91■□□□□ 0.14
SCAF4-202ENST00000399804 FERMT2Q96AC1 680 aa15.91■□□□□ 0.14
SCAF4-202ENST00000399804 COA1Q9GZY4 146 aa15.91■□□□□ 0.14
SCAF4-202ENST00000399804 SERTAD1Q9UHV2 236 aa15.91■□□□□ 0.14
SCAF4-202ENST00000399804 PNPLA7Q6ZV29 1317 aa15.91■□□□□ 0.14
SCAF4-202ENST00000399804 DDIT3P35638 169 aa15.91■□□□□ 0.14
SCAF4-202ENST00000399804 CCDC70Q6NSX1 233 aa15.91■□□□□ 0.14
SCAF4-202ENST00000399804 NSUN4Q96CB9 384 aaKnown RBP15.91■□□□□ 0.14
SCAF4-202ENST00000399804 MASTLQ96GX5 879 aa15.91■□□□□ 0.14
SCAF4-202ENST00000399804 ADAMTSL3P82987 1691 aa15.9■□□□□ 0.14
SCAF4-202ENST00000399804 SETD1AO15047 1707 aaKnown RBP15.9■□□□□ 0.14
SCAF4-202ENST00000399804 NIM1KQ8IY84 436 aa15.9■□□□□ 0.14
SCAF4-202ENST00000399804 REXO1Q8N1G1 1221 aaKnown RBP15.9■□□□□ 0.14
SCAF4-202ENST00000399804 KRT25Q7Z3Z0 450 aa15.9■□□□□ 0.14
SCAF4-202ENST00000399804 SLC44A5Q8NCS7 719 aa15.9■□□□□ 0.14
SCAF4-202ENST00000399804 SERPINB13Q9UIV8 391 aa15.9■□□□□ 0.14
SCAF4-202ENST00000399804 MAPK8IP1Q9UQF2 711 aa15.9■□□□□ 0.14
SCAF4-202ENST00000399804 LTN1O94822 1766 aa15.9■□□□□ 0.14
SCAF4-202ENST00000399804 A0A087WWV3 80 aa15.9■□□□□ 0.14
SCAF4-202ENST00000399804 A0A1W2PQ27 194 aa15.9■□□□□ 0.14
SCAF4-202ENST00000399804 A0A1W2PQ64 194 aa15.9■□□□□ 0.14
SCAF4-202ENST00000399804 A0A1W2PQD8 194 aa15.9■□□□□ 0.14
SCAF4-202ENST00000399804 ZSCAN12O43309 604 aa15.9■□□□□ 0.14
SCAF4-202ENST00000399804 NMT2O60551 498 aa15.9■□□□□ 0.14
SCAF4-202ENST00000399804 POSTNQ15063 836 aa15.9■□□□□ 0.14
SCAF4-202ENST00000399804 CTR9Q6PD62 1173 aa15.9■□□□□ 0.14
SCAF4-202ENST00000399804 FCHSD1Q86WN1 690 aa15.9■□□□□ 0.14
SCAF4-202ENST00000399804 CCDC150Q8NCX0 1101 aa15.9■□□□□ 0.14
SCAF4-202ENST00000399804 KIF18AQ8NI77 898 aa15.9■□□□□ 0.14
SCAF4-202ENST00000399804 KCNB2Q92953 911 aa15.9■□□□□ 0.14
SCAF4-202ENST00000399804 UIMC1Q96RL1 719 aa15.9■□□□□ 0.14
SCAF4-202ENST00000399804 FOXP1Q9H334 677 aaPredicted RBP15.9■□□□□ 0.14
SCAF4-202ENST00000399804 SAMM50Q9Y512 469 aa15.9■□□□□ 0.14
SCAF4-202ENST00000399804 NLRP12P59046 1061 aa15.89■□□□□ 0.13
SCAF4-202ENST00000399804 INF2Q27J81 1249 aa15.89■□□□□ 0.13
SCAF4-202ENST00000399804 PTF1AQ7RTS3 328 aa15.89■□□□□ 0.13
SCAF4-202ENST00000399804 ENAHQ8N8S7 591 aaPredicted RBP15.89■□□□□ 0.13
SCAF4-202ENST00000399804 PLEKHA8P1O95397 391 aa15.89■□□□□ 0.13
SCAF4-202ENST00000399804 FGFR1OPO95684 399 aaKnown RBP15.89■□□□□ 0.13
SCAF4-202ENST00000399804 MMP1P03956 469 aa15.89■□□□□ 0.13
SCAF4-202ENST00000399804 ERMNQ8TAM6 284 aa15.89■□□□□ 0.13
SCAF4-202ENST00000399804 BIN2Q9UBW5 565 aaPredicted RBP15.89■□□□□ 0.13
SCAF4-202ENST00000399804 WDR19Q8NEZ3 1342 aa15.89■□□□□ 0.13
SCAF4-202ENST00000399804 ADCY7P51828 1080 aa15.89■□□□□ 0.13
SCAF4-202ENST00000399804 CERKLQ49MI3 558 aaPredicted RBP15.89■□□□□ 0.13
SCAF4-202ENST00000399804 FGFR2P21802 821 aa15.88■□□□□ 0.13
SCAF4-202ENST00000399804 KLRK1P26718 216 aa15.88■□□□□ 0.13
SCAF4-202ENST00000399804 PTGDRQ13258 359 aa15.88■□□□□ 0.13
SCAF4-202ENST00000399804 WDR78Q5VTH9 848 aa15.88■□□□□ 0.13
SCAF4-202ENST00000399804 LRRC27Q9C0I9 530 aa15.88■□□□□ 0.13
SCAF4-202ENST00000399804 EPB41L4AQ9HCS5 686 aaPredicted RBP15.88■□□□□ 0.13
SCAF4-202ENST00000399804 MED1Q15648 1581 aaPredicted RBP15.88■□□□□ 0.13
SCAF4-202ENST00000399804 TCP10L2B9ZVM9 353 aa15.88■□□□□ 0.13
SCAF4-202ENST00000399804 KIF20AO95235 890 aa15.88■□□□□ 0.13
SCAF4-202ENST00000399804 ZNF75DP51815 510 aa15.88■□□□□ 0.13
SCAF4-202ENST00000399804 C3orf67Q6ZVT6 689 aa15.88■□□□□ 0.13
SCAF4-202ENST00000399804 FBXO33Q7Z6M2 555 aa15.88■□□□□ 0.13
SCAF4-202ENST00000399804 ZNF397Q8NF99 534 aaPredicted RBP15.88■□□□□ 0.13
SCAF4-202ENST00000399804 CAGE1Q8TC20 777 aa15.88■□□□□ 0.13
SCAF4-202ENST00000399804 RASGRP4Q8TDF6 673 aa15.88■□□□□ 0.13
SCAF4-202ENST00000399804 PGBD1Q96JS3 809 aa15.88■□□□□ 0.13
SCAF4-202ENST00000399804 CDK8P49336 464 aa15.88■□□□□ 0.13
SCAF4-202ENST00000399804 PLCD1P51178 756 aa15.88■□□□□ 0.13
SCAF4-202ENST00000399804 SPAG1Q07617 926 aa15.88■□□□□ 0.13
SCAF4-202ENST00000399804 ARHGEF10LQ9HCE6 1279 aa15.88■□□□□ 0.13
SCAF4-202ENST00000399804 ANTXR2P58335 489 aa15.87■□□□□ 0.13
SCAF4-202ENST00000399804 USP17L2Q6R6M4 530 aa15.87■□□□□ 0.13
SCAF4-202ENST00000399804 ARGLU1Q9NWB6 273 aaPredicted RBP15.87■□□□□ 0.13
SCAF4-202ENST00000399804 KIF2AO00139 706 aaPredicted RBP15.87■□□□□ 0.13
SCAF4-202ENST00000399804 CCDC40Q4G0X9 1142 aa15.87■□□□□ 0.13
SCAF4-202ENST00000399804 CACNA2D4Q7Z3S7 1137 aa15.87■□□□□ 0.13
SCAF4-202ENST00000399804 SGMS1Q86VZ5 419 aa15.87■□□□□ 0.13
SCAF4-202ENST00000399804 PPP1R9BQ96SB3 815 aa15.87■□□□□ 0.13
SCAF4-202ENST00000399804 BCS1LQ9Y276 419 aa15.87■□□□□ 0.13
SCAF4-202ENST00000399804 USH1GQ495M9 461 aa15.87■□□□□ 0.13
SCAF4-202ENST00000399804 SLC10A5Q5PT55 438 aa15.87■□□□□ 0.13
SCAF4-202ENST00000399804 MRVI1Q9Y6F6 885 aa15.87■□□□□ 0.13
SCAF4-202ENST00000399804 KIAA1328Q86T90 577 aa15.87■□□□□ 0.13
SCAF4-202ENST00000399804 MLKLQ8NB16 471 aa15.87■□□□□ 0.13
SCAF4-202ENST00000399804 CTAGE1Q96RT6 745 aa15.87■□□□□ 0.13
SCAF4-202ENST00000399804 TOPAZ1Q8N9V7 1692 aa15.86■□□□□ 0.13
SCAF4-202ENST00000399804 RAD17O75943 681 aa15.86■□□□□ 0.13
SCAF4-202ENST00000399804 DGKHQ86XP1 1220 aa15.86■□□□□ 0.13
SCAF4-202ENST00000399804 NFE2L3Q9Y4A8 694 aa15.86■□□□□ 0.13
SCAF4-202ENST00000399804 CLRN2A0PK11 232 aa15.86■□□□□ 0.13
SCAF4-202ENST00000399804 PRPF3O43395 683 aaKnown RBP15.86■□□□□ 0.13
SCAF4-202ENST00000399804 URI1O94763 535 aaPredicted RBP15.86■□□□□ 0.13
SCAF4-202ENST00000399804 CACNB3P54284 484 aa15.86■□□□□ 0.13
SCAF4-202ENST00000399804 ENOX2Q16206 610 aaKnown RBP15.86■□□□□ 0.13
SCAF4-202ENST00000399804 WWC2Q6AWC2 1192 aa15.86■□□□□ 0.13
SCAF4-202ENST00000399804 IGDCC4Q8TDY8 1250 aa15.86■□□□□ 0.13
SCAF4-202ENST00000399804 TMX1Q9H3N1 280 aa15.86■□□□□ 0.13
SCAF4-202ENST00000399804 C21orf2O43822 256 aa15.86■□□□□ 0.13
SCAF4-202ENST00000399804 ZNF827Q17R98 1081 aa15.86■□□□□ 0.13
SCAF4-202ENST00000399804 TMEM132AQ24JP5 1023 aa15.86■□□□□ 0.13
SCAF4-202ENST00000399804 KRBA2Q6ZNG9 492 aa15.86■□□□□ 0.13
SCAF4-202ENST00000399804 TBC1D16Q8TBP0 767 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms