RNA–Protein interactions for RNA: ENST00000399295.2

SMIM11A-202, Transcript of small integral membrane protein 11A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMIM11A, Length 1,074 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-202ENST00000399295 TMOD4Q9NZQ9 345 aa20.81■□□□□ 0.92
SMIM11A-202ENST00000399295 AGTPBP1Q9UPW5 1226 aa20.81■□□□□ 0.92
SMIM11A-202ENST00000399295 SLC45A1Q9Y2W3 748 aa20.81■□□□□ 0.92
SMIM11A-202ENST00000399295 PHIPQ8WWQ0 1821 aa20.81■□□□□ 0.92
SMIM11A-202ENST00000399295 TLR2O60603 784 aa20.8■□□□□ 0.92
SMIM11A-202ENST00000399295 DGKZQ13574 1117 aa20.8■□□□□ 0.92
SMIM11A-202ENST00000399295 TREML2Q5T2D2 321 aa20.8■□□□□ 0.92
SMIM11A-202ENST00000399295 PARK7Q99497 189 aaKnown RBP20.8■□□□□ 0.92
SMIM11A-202ENST00000399295 ZNF287Q9HBT7 754 aa20.8■□□□□ 0.92
SMIM11A-202ENST00000399295 ROBO3Q96MS0 1386 aa20.8■□□□□ 0.92
SMIM11A-202ENST00000399295 SLC3A2P08195 630 aaKnown RBP20.79■□□□□ 0.92
SMIM11A-202ENST00000399295 HSPD1P10809 573 aaKnown RBP20.79■□□□□ 0.92
SMIM11A-202ENST00000399295 PPARAQ07869 468 aa20.79■□□□□ 0.92
SMIM11A-202ENST00000399295 ALX1Q15699 326 aa20.79■□□□□ 0.92
SMIM11A-202ENST00000399295 ACER1Q8TDN7 264 aa20.79■□□□□ 0.92
SMIM11A-202ENST00000399295 FEZ1Q99689 392 aa20.79■□□□□ 0.92
SMIM11A-202ENST00000399295 FGAP02671 866 aa20.78■□□□□ 0.92
SMIM11A-202ENST00000399295 CYP2C8P10632 490 aa20.78■□□□□ 0.92
SMIM11A-202ENST00000399295 SP3Q02447 781 aa20.78■□□□□ 0.92
SMIM11A-202ENST00000399295 PABPC4Q13310 644 aaKnown RBP eCLIP20.78■□□□□ 0.92
SMIM11A-202ENST00000399295 USP17L2Q6R6M4 530 aa20.78■□□□□ 0.92
SMIM11A-202ENST00000399295 CTU1Q7Z7A3 348 aaKnown RBP20.78■□□□□ 0.92
SMIM11A-202ENST00000399295 EMILIN3Q9NT22 766 aa20.78■□□□□ 0.92
SMIM11A-202ENST00000399295 RASA1P20936 1047 aa20.77■□□□□ 0.92
SMIM11A-202ENST00000399295 PDE4BQ07343 736 aa20.77■□□□□ 0.92
SMIM11A-202ENST00000399295 ZNF444Q8N0Y2 327 aaPredicted RBP20.77■□□□□ 0.92
SMIM11A-202ENST00000399295 ERO1AQ96HE7 468 aa20.77■□□□□ 0.92
SMIM11A-202ENST00000399295 KIAA1683Q9H0B3 1180 aa20.77■□□□□ 0.92
SMIM11A-202ENST00000399295 PRDM1O75626 825 aa20.76■□□□□ 0.91
SMIM11A-202ENST00000399295 USP14P54578 494 aa20.76■□□□□ 0.91
SMIM11A-202ENST00000399295 ZYXQ15942 572 aaKnown RBP20.76■□□□□ 0.91
SMIM11A-202ENST00000399295 C17orf99Q6UX52 265 aa20.76■□□□□ 0.91
SMIM11A-202ENST00000399295 CPA4Q9UI42 421 aa20.76■□□□□ 0.91
SMIM11A-202ENST00000399295 PNMA3Q9UL41 463 aa20.76■□□□□ 0.91
SMIM11A-202ENST00000399295 CDC45O75419 566 aa20.75■□□□□ 0.91
SMIM11A-202ENST00000399295 OSBPP22059 807 aa20.75■□□□□ 0.91
SMIM11A-202ENST00000399295 CHMLP26374 656 aa20.75■□□□□ 0.91
SMIM11A-202ENST00000399295 ICA1Q05084 483 aa20.75■□□□□ 0.91
SMIM11A-202ENST00000399295 CTDSPL2Q05D32 466 aa20.75■□□□□ 0.91
SMIM11A-202ENST00000399295 SMCR8Q8TEV9 937 aaPredicted RBP20.75■□□□□ 0.91
SMIM11A-202ENST00000399295 KANSL2Q9H9L4 492 aa20.75■□□□□ 0.91
SMIM11A-202ENST00000399295 ANAPC4Q9UJX5 808 aa20.75■□□□□ 0.91
SMIM11A-202ENST00000399295 ZMYM6O95789 1325 aa20.75■□□□□ 0.91
SMIM11A-202ENST00000399295 PTPRFP10586 1907 aa20.74■□□□□ 0.91
SMIM11A-202ENST00000399295 A0A1W2PRG0 241 aa20.74■□□□□ 0.91
SMIM11A-202ENST00000399295 HOXA7P31268 230 aaPredicted RBP20.74■□□□□ 0.91
SMIM11A-202ENST00000399295 CLEC10AQ8IUN9 316 aa20.74■□□□□ 0.91
SMIM11A-202ENST00000399295 SIAH1Q8IUQ4 282 aa20.74■□□□□ 0.91
SMIM11A-202ENST00000399295 RUFY2Q8WXA3 655 aa20.74■□□□□ 0.91
SMIM11A-202ENST00000399295 C12orf42Q96LP6 360 aa20.74■□□□□ 0.91
SMIM11A-202ENST00000399295 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.74■□□□□ 0.91
SMIM11A-202ENST00000399295 ASCC2Q9H1I8 757 aaPredicted RBP20.74■□□□□ 0.91
SMIM11A-202ENST00000399295 ARHGEF10LQ9HCE6 1279 aa20.74■□□□□ 0.91
SMIM11A-202ENST00000399295 ADGRA2Q96PE1 1338 aa20.74■□□□□ 0.91
SMIM11A-202ENST00000399295 ATP2B2Q01814 1243 aa20.73■□□□□ 0.91
SMIM11A-202ENST00000399295 CASC1Q6TDU7 716 aa20.73■□□□□ 0.91
SMIM11A-202ENST00000399295 CD99L2Q8TCZ2 262 aa20.73■□□□□ 0.91
SMIM11A-202ENST00000399295 MCOLN1Q9GZU1 580 aa20.73■□□□□ 0.91
SMIM11A-202ENST00000399295 SH2D4AQ9H788 454 aa20.73■□□□□ 0.91
SMIM11A-202ENST00000399295 GNRH1P01148 92 aa20.72■□□□□ 0.91
SMIM11A-202ENST00000399295 EEF2P13639 858 aaKnown RBP20.72■□□□□ 0.91
SMIM11A-202ENST00000399295 IRX3P78415 501 aaPredicted RBP20.72■□□□□ 0.91
SMIM11A-202ENST00000399295 ABHD8Q96I13 439 aa20.72■□□□□ 0.91
SMIM11A-202ENST00000399295 DSCC1Q9BVC3 393 aa20.72■□□□□ 0.91
SMIM11A-202ENST00000399295 TMX2Q9Y320 296 aa20.72■□□□□ 0.91
SMIM11A-202ENST00000399295 TSPY3P0CV98 308 aa20.71■□□□□ 0.91
SMIM11A-202ENST00000399295 TSPY8P0CW00 308 aa20.71■□□□□ 0.91
SMIM11A-202ENST00000399295 BCRP11274 1271 aa20.71■□□□□ 0.91
SMIM11A-202ENST00000399295 VCAM1P19320 739 aa20.71■□□□□ 0.91
SMIM11A-202ENST00000399295 HAND2P61296 217 aa20.71■□□□□ 0.91
SMIM11A-202ENST00000399295 KIF22Q14807 665 aa20.71■□□□□ 0.91
SMIM11A-202ENST00000399295 IL25Q9H293 177 aa20.71■□□□□ 0.91
SMIM11A-202ENST00000399295 UPF2Q9HAU5 1272 aaKnown RBP20.71■□□□□ 0.91
SMIM11A-202ENST00000399295 INCENPQ9NQS7 918 aa20.71■□□□□ 0.91
SMIM11A-202ENST00000399295 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.71■□□□□ 0.91
SMIM11A-202ENST00000399295 RBM19Q9Y4C8 960 aaKnown RBP20.71■□□□□ 0.91
SMIM11A-202ENST00000399295 LOC285556D6RIA3 1793 aa20.71■□□□□ 0.91
SMIM11A-202ENST00000399295 RAD50Q92878 1312 aa20.71■□□□□ 0.91
SMIM11A-202ENST00000399295 USP17L15C9J2P7 530 aa20.7■□□□□ 0.9
SMIM11A-202ENST00000399295 USP17L13C9JLJ4 530 aa20.7■□□□□ 0.9
SMIM11A-202ENST00000399295 USP17L11C9JVI0 530 aa20.7■□□□□ 0.9
SMIM11A-202ENST00000399295 USP17L18D6R9N7 530 aa20.7■□□□□ 0.9
SMIM11A-202ENST00000399295 USP17L22D6RA61 530 aa20.7■□□□□ 0.9
SMIM11A-202ENST00000399295 USP17L17D6RBQ6 530 aa20.7■□□□□ 0.9
SMIM11A-202ENST00000399295 USP17L19D6RCP7 530 aa20.7■□□□□ 0.9
SMIM11A-202ENST00000399295 USP17L20D6RJB6 530 aa20.7■□□□□ 0.9
SMIM11A-202ENST00000399295 GCLCP48506 637 aaPredicted RBP20.7■□□□□ 0.9
SMIM11A-202ENST00000399295 LACTBP83111 547 aaPredicted RBP20.7■□□□□ 0.9
SMIM11A-202ENST00000399295 TFAP4Q01664 338 aa20.7■□□□□ 0.9
SMIM11A-202ENST00000399295 USP17L24Q0WX57 530 aa20.7■□□□□ 0.9
SMIM11A-202ENST00000399295 FAM47AQ5JRC9 791 aa20.7■□□□□ 0.9
SMIM11A-202ENST00000399295 NEDD1Q8NHV4 660 aa20.7■□□□□ 0.9
SMIM11A-202ENST00000399295 P2RX7Q99572 595 aaKnown RBP20.7■□□□□ 0.9
SMIM11A-202ENST00000399295 EFCC1Q9HA90 598 aa20.7■□□□□ 0.9
SMIM11A-202ENST00000399295 TRIM17Q9Y577 477 aa20.7■□□□□ 0.9
SMIM11A-202ENST00000399295 MYH8P13535 1937 aa20.7■□□□□ 0.9
SMIM11A-202ENST00000399295 IGKV6D-41A0A0C4DH26 115 aa20.69■□□□□ 0.9
SMIM11A-202ENST00000399295 ZNF213O14771 459 aa20.69■□□□□ 0.9
SMIM11A-202ENST00000399295 FGRP09769 529 aa20.69■□□□□ 0.9
SMIM11A-202ENST00000399295 FBXO46Q6PJ61 603 aaPredicted RBP20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 94.1 ms