RNA–Protein interactions for RNA: ENST00000398958.6

RCC1-204, Transcript of regulator of chromosome condensation 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RCC1, Length 2,715 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1-204ENST00000398958 SLC20A2Q08357 652 aa12.95□□□□□ -0.34
RCC1-204ENST00000398958 CLEC10AQ8IUN9 316 aa12.95□□□□□ -0.34
RCC1-204ENST00000398958 FMR1NBQ8N0W7 255 aaPredicted RBP12.95□□□□□ -0.34
RCC1-204ENST00000398958 CCDC150Q8NCX0 1101 aa12.95□□□□□ -0.34
RCC1-204ENST00000398958 XPO4Q9C0E2 1151 aaKnown RBP12.95□□□□□ -0.34
RCC1-204ENST00000398958 FAM205CA6NFA0 338 aa12.94□□□□□ -0.34
RCC1-204ENST00000398958 NRDCO43847 1150 aa12.94□□□□□ -0.34
RCC1-204ENST00000398958 PFKFB1P16118 471 aa12.94□□□□□ -0.34
RCC1-204ENST00000398958 WTAPQ15007 396 aa12.94□□□□□ -0.34
RCC1-204ENST00000398958 ARMCX5Q6P1M9 558 aa12.94□□□□□ -0.34
RCC1-204ENST00000398958 NEK11Q8NG66 645 aa12.94□□□□□ -0.34
RCC1-204ENST00000398958 OXER1Q8TDS5 423 aa12.94□□□□□ -0.34
RCC1-204ENST00000398958 TRIM34Q9BYJ4 488 aa12.94□□□□□ -0.34
RCC1-204ENST00000398958 IFNKQ9P0W0 207 aa12.94□□□□□ -0.34
RCC1-204ENST00000398958 PSDA5PKW4 1024 aaPredicted RBP12.94□□□□□ -0.34
RCC1-204ENST00000398958 FAM196BA6NMK8 535 aa12.94□□□□□ -0.34
RCC1-204ENST00000398958 FOXN1O15353 648 aa12.94□□□□□ -0.34
RCC1-204ENST00000398958 USP5P45974 858 aa12.94□□□□□ -0.34
RCC1-204ENST00000398958 SAMD1Q6SPF0 538 aaPredicted RBP12.94□□□□□ -0.34
RCC1-204ENST00000398958 SH3RF3Q8TEJ3 882 aaPredicted RBP12.94□□□□□ -0.34
RCC1-204ENST00000398958 UIMC1Q96RL1 719 aa12.94□□□□□ -0.34
RCC1-204ENST00000398958 DNAI1Q9UI46 699 aa12.94□□□□□ -0.34
RCC1-204ENST00000398958 ZNF202O95125 648 aa12.93□□□□□ -0.34
RCC1-204ENST00000398958 TPM4P67936 248 aa12.93□□□□□ -0.34
RCC1-204ENST00000398958 ZRSR1Q15695 479 aaKnown RBP12.93□□□□□ -0.34
RCC1-204ENST00000398958 RC3H1Q5TC82 1133 aaKnown RBP12.93□□□□□ -0.34
RCC1-204ENST00000398958 ADALQ6DHV7 355 aa12.93□□□□□ -0.34
RCC1-204ENST00000398958 MNS1Q8NEH6 495 aa12.93□□□□□ -0.34
RCC1-204ENST00000398958 NACAP1Q9BZK3 213 aa12.93□□□□□ -0.34
RCC1-204ENST00000398958 SSRP1Q08945 709 aaKnown RBP12.93□□□□□ -0.34
RCC1-204ENST00000398958 GRAPQ13588 217 aa12.93□□□□□ -0.34
RCC1-204ENST00000398958 NOM1Q5C9Z4 860 aaKnown RBP12.93□□□□□ -0.34
RCC1-204ENST00000398958 GRAPLQ8TC17 118 aaPredicted RBP12.93□□□□□ -0.34
RCC1-204ENST00000398958 DDX60Q8IY21 1712 aaKnown RBP12.93□□□□□ -0.34
RCC1-204ENST00000398958 TAF1LQ8IZX4 1826 aa12.92□□□□□ -0.34
RCC1-204ENST00000398958 SEC31AO94979 1220 aaKnown RBP12.92□□□□□ -0.34
RCC1-204ENST00000398958 ZRANB2O95218 330 aaKnown RBP eCLIP12.92□□□□□ -0.34
RCC1-204ENST00000398958 RBM5P52756 815 aaKnown RBP eCLIP12.92□□□□□ -0.34
RCC1-204ENST00000398958 RAD51AP2Q09MP3 1159 aa12.92□□□□□ -0.34
RCC1-204ENST00000398958 PNOCQ13519 176 aa12.92□□□□□ -0.34
RCC1-204ENST00000398958 TRIM29Q14134 588 aa12.92□□□□□ -0.34
RCC1-204ENST00000398958 UBE4AQ14139 1066 aa12.92□□□□□ -0.34
RCC1-204ENST00000398958 PDILTQ8N807 584 aa12.92□□□□□ -0.34
RCC1-204ENST00000398958 NSUN4Q96CB9 384 aaKnown RBP12.92□□□□□ -0.34
RCC1-204ENST00000398958 TSPYL1Q9H0U9 437 aa12.92□□□□□ -0.34
RCC1-204ENST00000398958 POLRMTO00411 1230 aaKnown RBP12.92□□□□□ -0.34
RCC1-204ENST00000398958 VEGFAP15692 232 aaPredicted RBP12.92□□□□□ -0.34
RCC1-204ENST00000398958 TCP10Q12799 353 aa12.92□□□□□ -0.34
RCC1-204ENST00000398958 RTN1Q16799 776 aa12.92□□□□□ -0.34
RCC1-204ENST00000398958 MFSD14BQ5SR56 506 aa12.92□□□□□ -0.34
RCC1-204ENST00000398958 AXDND1Q5T1B0 1012 aaPredicted RBP12.92□□□□□ -0.34
RCC1-204ENST00000398958 FBXL16Q8N461 479 aa12.92□□□□□ -0.34
RCC1-204ENST00000398958 TMEM87BQ96K49 555 aa12.92□□□□□ -0.34
RCC1-204ENST00000398958 UBAC1Q9BSL1 405 aa12.92□□□□□ -0.34
RCC1-204ENST00000398958 FEZ2Q9UHY8 353 aaPredicted RBP12.92□□□□□ -0.34
RCC1-204ENST00000398958 TNKSO95271 1327 aa12.92□□□□□ -0.34
RCC1-204ENST00000398958 ERICH2A1L162 156 aa12.91□□□□□ -0.34
RCC1-204ENST00000398958 USP17L3A6NCW0 530 aa12.91□□□□□ -0.34
RCC1-204ENST00000398958 USP17L4A6NCW7 530 aa12.91□□□□□ -0.34
RCC1-204ENST00000398958 URI1O94763 535 aaPredicted RBP12.91□□□□□ -0.34
RCC1-204ENST00000398958 ETF1P62495 437 aaKnown RBP12.91□□□□□ -0.34
RCC1-204ENST00000398958 ATP2B2Q01814 1243 aa12.91□□□□□ -0.34
RCC1-204ENST00000398958 CPLX2Q6PUV4 134 aaKnown RBP12.91□□□□□ -0.34
RCC1-204ENST00000398958 SHC4Q6S5L8 630 aa12.91□□□□□ -0.34
RCC1-204ENST00000398958 USP17L1Q7RTZ2 530 aa12.91□□□□□ -0.34
RCC1-204ENST00000398958 GRAMD1CQ8IYS0 662 aa12.91□□□□□ -0.34
RCC1-204ENST00000398958 FBXO41Q8TF61 875 aa12.91□□□□□ -0.34
RCC1-204ENST00000398958 VPS54Q9P1Q0 977 aa12.91□□□□□ -0.34
RCC1-204ENST00000398958 PLEKHA8P1O95397 391 aa12.91□□□□□ -0.34
RCC1-204ENST00000398958 LDHBP07195 334 aaKnown RBP12.91□□□□□ -0.34
RCC1-204ENST00000398958 GOLGA8HP0CJ92 632 aa12.91□□□□□ -0.34
RCC1-204ENST00000398958 ZNF654Q8IZM8 581 aa12.91□□□□□ -0.34
RCC1-204ENST00000398958 SHISA4Q96DD7 197 aa12.91□□□□□ -0.34
RCC1-204ENST00000398958 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.91□□□□□ -0.34
RCC1-204ENST00000398958 POLR3EQ9NVU0 708 aa12.91□□□□□ -0.34
RCC1-204ENST00000398958 PLCD1P51178 756 aa12.9□□□□□ -0.34
RCC1-204ENST00000398958 KIAA0825Q8IV33 1275 aa12.9□□□□□ -0.34
RCC1-204ENST00000398958 DIS3L2Q8IYB7 885 aaKnown RBP12.9□□□□□ -0.34
RCC1-204ENST00000398958 TXLNBQ8N3L3 684 aa12.9□□□□□ -0.34
RCC1-204ENST00000398958 RIOK1Q9BRS2 568 aaKnown RBP12.9□□□□□ -0.34
RCC1-204ENST00000398958 CARD6Q9BX69 1037 aa12.9□□□□□ -0.34
RCC1-204ENST00000398958 STX8Q9UNK0 236 aa12.9□□□□□ -0.34
RCC1-204ENST00000398958 BRCA2P51587 3418 aa12.9□□□□□ -0.34
RCC1-204ENST00000398958 MYH15Q9Y2K3 1946 aa12.9□□□□□ -0.34
RCC1-204ENST00000398958 ZBTB7AO95365 584 aa12.9□□□□□ -0.34
RCC1-204ENST00000398958 TUBB4AP04350 444 aa12.9□□□□□ -0.34
RCC1-204ENST00000398958 SLC3A2P08195 630 aaKnown RBP12.9□□□□□ -0.34
RCC1-204ENST00000398958 KRBA2Q6ZNG9 492 aa12.9□□□□□ -0.34
RCC1-204ENST00000398958 KCNG4Q8TDN1 519 aa12.9□□□□□ -0.34
RCC1-204ENST00000398958 KRT23Q9C075 422 aa12.9□□□□□ -0.34
RCC1-204ENST00000398958 VAT1LQ9HCJ6 419 aa12.9□□□□□ -0.34
RCC1-204ENST00000398958 ZCCHC17Q9NP64 241 aaKnown RBP12.9□□□□□ -0.34
RCC1-204ENST00000398958 GGA1Q9UJY5 639 aa12.9□□□□□ -0.34
RCC1-204ENST00000398958 PCDHB6Q9Y5E3 794 aa12.9□□□□□ -0.34
RCC1-204ENST00000398958 LY75O60449 1722 aa12.9□□□□□ -0.34
RCC1-204ENST00000398958 BAZ2AQ9UIF9 1905 aaKnown RBP12.9□□□□□ -0.34
RCC1-204ENST00000398958 C4AP0C0L4 1744 aa12.9□□□□□ -0.34
RCC1-204ENST00000398958 C4BP0C0L5 1744 aa12.9□□□□□ -0.34
RCC1-204ENST00000398958 ADAMTS3O15072 1205 aa12.9□□□□□ -0.35
RCC1-204ENST00000398958 LMOD1P29536 600 aaPredicted RBP12.9□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms