RNA–Protein interactions for RNA: ENST00000394888.8

CPSF7-202, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS P4 TSL 2 BASIC

Gene CPSF7, Length 3,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-202ENST00000394888 CD44P16070 742 aaKnown RBP17.7■□□□□ 0.42
CPSF7-202ENST00000394888 NFIXQ14938 502 aa17.7■□□□□ 0.42
CPSF7-202ENST00000394888 C4orf32Q8N8J7 132 aa17.7■□□□□ 0.42
CPSF7-202ENST00000394888 UBE2Q2Q8WVN8 375 aa17.7■□□□□ 0.42
CPSF7-202ENST00000394888 CABP5Q9NP86 173 aa17.7■□□□□ 0.42
CPSF7-202ENST00000394888 FANCLQ9NW38 375 aa17.7■□□□□ 0.42
CPSF7-202ENST00000394888 BECN2A8MW95 431 aa17.69■□□□□ 0.42
CPSF7-202ENST00000394888 E2F4Q16254 413 aa17.69■□□□□ 0.42
CPSF7-202ENST00000394888 EPSTI1Q96J88 318 aa17.69■□□□□ 0.42
CPSF7-202ENST00000394888 TYW1BQ6NUM6 668 aa17.69■□□□□ 0.42
CPSF7-202ENST00000394888 POLR2DO15514 142 aaKnown RBP17.69■□□□□ 0.42
CPSF7-202ENST00000394888 KCNJ6P48051 423 aa17.69■□□□□ 0.42
CPSF7-202ENST00000394888 DPYDQ12882 1025 aa17.69■□□□□ 0.42
CPSF7-202ENST00000394888 DNTTIP2Q5QJE6 756 aaKnown RBP17.69■□□□□ 0.42
CPSF7-202ENST00000394888 CPLX2Q6PUV4 134 aaKnown RBP17.69■□□□□ 0.42
CPSF7-202ENST00000394888 NUP133Q8WUM0 1156 aa17.69■□□□□ 0.42
CPSF7-202ENST00000394888 WASF1Q92558 559 aa17.69■□□□□ 0.42
CPSF7-202ENST00000394888 FAM205AQ6ZU69 1335 aa17.68■□□□□ 0.42
CPSF7-202ENST00000394888 TNNT1P13805 278 aa17.68■□□□□ 0.42
CPSF7-202ENST00000394888 ZNF827Q17R98 1081 aa17.68■□□□□ 0.42
CPSF7-202ENST00000394888 FAM47AQ5JRC9 791 aa17.68■□□□□ 0.42
CPSF7-202ENST00000394888 TAOK2Q9UL54 1235 aa17.68■□□□□ 0.42
CPSF7-202ENST00000394888 ARFGEF1Q9Y6D6 1849 aa17.68■□□□□ 0.42
CPSF7-202ENST00000394888 SMTNL1A8MU46 457 aa17.68■□□□□ 0.42
CPSF7-202ENST00000394888 NEMFO60524 1076 aa17.68■□□□□ 0.42
CPSF7-202ENST00000394888 GOLGA8FQ08AF8 430 aa17.68■□□□□ 0.42
CPSF7-202ENST00000394888 GOLGA8DPQ0D2H9 430 aa17.68■□□□□ 0.42
CPSF7-202ENST00000394888 POSTNQ15063 836 aa17.68■□□□□ 0.42
CPSF7-202ENST00000394888 JAG2Q9Y219 1238 aa17.68■□□□□ 0.42
CPSF7-202ENST00000394888 PCP11498 1178 aaKnown RBP17.68■□□□□ 0.42
CPSF7-202ENST00000394888 CASP1P29466 404 aa17.68■□□□□ 0.42
CPSF7-202ENST00000394888 CAVIN4Q5BKX8 364 aa17.68■□□□□ 0.42
CPSF7-202ENST00000394888 LRRN4CLQ8ND94 238 aa17.68■□□□□ 0.42
CPSF7-202ENST00000394888 LRRC15Q8TF66 581 aa17.68■□□□□ 0.42
CPSF7-202ENST00000394888 DDAH1O94760 285 aa17.67■□□□□ 0.42
CPSF7-202ENST00000394888 MYL5Q02045 173 aa17.67■□□□□ 0.42
CPSF7-202ENST00000394888 CUL4BQ13620 913 aa17.67■□□□□ 0.42
CPSF7-202ENST00000394888 VSTM4Q8IW00 320 aa17.67■□□□□ 0.42
CPSF7-202ENST00000394888 PPP1R13BQ96KQ4 1090 aa17.67■□□□□ 0.42
CPSF7-202ENST00000394888 V9GY48 417 aaPredicted RBP17.67■□□□□ 0.42
CPSF7-202ENST00000394888 GNPATO15228 680 aa17.67■□□□□ 0.42
CPSF7-202ENST00000394888 USP17L8P0C7I0 530 aa17.67■□□□□ 0.42
CPSF7-202ENST00000394888 HIBADHP31937 336 aaKnown RBP17.67■□□□□ 0.42
CPSF7-202ENST00000394888 UBAC1Q9BSL1 405 aa17.67■□□□□ 0.42
CPSF7-202ENST00000394888 PPP2R5BQ15173 497 aa17.67■□□□□ 0.42
CPSF7-202ENST00000394888 RASGRP2Q7LDG7 609 aa17.67■□□□□ 0.42
CPSF7-202ENST00000394888 TMC6Q7Z403 805 aa17.67■□□□□ 0.42
CPSF7-202ENST00000394888 JMYQ8N9B5 988 aa17.67■□□□□ 0.42
CPSF7-202ENST00000394888 TRIM29Q14134 588 aa17.66■□□□□ 0.42
CPSF7-202ENST00000394888 SART3Q15020 963 aaKnown RBP17.66■□□□□ 0.42
CPSF7-202ENST00000394888 CCDC93Q567U6 631 aa17.66■□□□□ 0.42
CPSF7-202ENST00000394888 IFIT1BQ5T764 474 aaKnown RBP17.66■□□□□ 0.42
CPSF7-202ENST00000394888 TRIM65Q6PJ69 517 aa17.66■□□□□ 0.42
CPSF7-202ENST00000394888 ANKS1AQ92625 1134 aa17.66■□□□□ 0.42
CPSF7-202ENST00000394888 GPR101Q96P66 508 aaPredicted RBP17.66■□□□□ 0.42
CPSF7-202ENST00000394888 TOMM22Q9NS69 142 aa17.66■□□□□ 0.42
CPSF7-202ENST00000394888 XDHP47989 1333 aa17.66■□□□□ 0.42
CPSF7-202ENST00000394888 TRIM22Q8IYM9 498 aa17.66■□□□□ 0.42
CPSF7-202ENST00000394888 CNNM3Q8NE01 707 aa17.66■□□□□ 0.42
CPSF7-202ENST00000394888 C8orf37Q96NL8 207 aa17.66■□□□□ 0.42
CPSF7-202ENST00000394888 GNL3LQ9NVN8 582 aaKnown RBP17.66■□□□□ 0.42
CPSF7-202ENST00000394888 CCDC196A0A1B0GTZ2 297 aa17.65■□□□□ 0.42
CPSF7-202ENST00000394888 CYTH3O43739 400 aa17.65■□□□□ 0.42
CPSF7-202ENST00000394888 C12orf60Q5U649 245 aa17.65■□□□□ 0.42
CPSF7-202ENST00000394888 ATP8A2Q9NTI2 1148 aa17.65■□□□□ 0.42
CPSF7-202ENST00000394888 ATP2C1P98194 919 aaPredicted RBP17.65■□□□□ 0.42
CPSF7-202ENST00000394888 SH3RF3Q8TEJ3 882 aaPredicted RBP17.65■□□□□ 0.42
CPSF7-202ENST00000394888 SETDB2Q96T68 719 aa17.65■□□□□ 0.42
CPSF7-202ENST00000394888 NYXQ9GZU5 481 aa17.65■□□□□ 0.42
CPSF7-202ENST00000394888 PIP4K2BP78356 416 aa17.65■□□□□ 0.42
CPSF7-202ENST00000394888 PBX1P40424 430 aa17.64■□□□□ 0.41
CPSF7-202ENST00000394888 GSDMDP57764 484 aa17.64■□□□□ 0.41
CPSF7-202ENST00000394888 CRY2Q49AN0 593 aa17.64■□□□□ 0.41
CPSF7-202ENST00000394888 PDXDC2PQ6P474 469 aa17.64■□□□□ 0.41
CPSF7-202ENST00000394888 C15orf52Q6ZUT6 534 aaKnown RBP17.64■□□□□ 0.41
CPSF7-202ENST00000394888 NBPF5PQ86XG9 351 aaPredicted RBP17.64■□□□□ 0.41
CPSF7-202ENST00000394888 REXO1L1PQ8IX06 675 aa17.64■□□□□ 0.41
CPSF7-202ENST00000394888 STAG2Q8N3U4 1231 aa17.64■□□□□ 0.41
CPSF7-202ENST00000394888 MAD2L2Q9UI95 211 aa17.64■□□□□ 0.41
CPSF7-202ENST00000394888 PFKFB3Q16875 520 aaPredicted RBP17.64■□□□□ 0.41
CPSF7-202ENST00000394888 CEP135Q66GS9 1140 aa17.64■□□□□ 0.41
CPSF7-202ENST00000394888 SYCP1Q15431 976 aa17.63■□□□□ 0.41
CPSF7-202ENST00000394888 SYMPKQ92797 1274 aaKnown RBP17.63■□□□□ 0.41
CPSF7-202ENST00000394888 DYNLL2Q96FJ2 89 aa17.63■□□□□ 0.41
CPSF7-202ENST00000394888 NLRP3Q96P20 1036 aa17.63■□□□□ 0.41
CPSF7-202ENST00000394888 RTFDC1Q9BY42 306 aaPredicted RBP17.63■□□□□ 0.41
CPSF7-202ENST00000394888 TRMT1Q9NXH9 659 aaKnown RBP17.63■□□□□ 0.41
CPSF7-202ENST00000394888 KRT2P35908 639 aa17.63■□□□□ 0.41
CPSF7-202ENST00000394888 TRMT44Q8IYL2 757 aaKnown RBP17.63■□□□□ 0.41
CPSF7-202ENST00000394888 PAGE5Q96GU1 130 aa17.63■□□□□ 0.41
CPSF7-202ENST00000394888 RBM28Q9NW13 759 aaKnown RBP17.63■□□□□ 0.41
CPSF7-202ENST00000394888 ERICH2A1L162 156 aa17.63■□□□□ 0.41
CPSF7-202ENST00000394888 PPP1R3GB7ZBB8 358 aa17.63■□□□□ 0.41
CPSF7-202ENST00000394888 SMC2O95347 1197 aa17.63■□□□□ 0.41
CPSF7-202ENST00000394888 L2HGDHQ9H9P8 463 aa17.63■□□□□ 0.41
CPSF7-202ENST00000394888 PLCD1P51178 756 aa17.62■□□□□ 0.41
CPSF7-202ENST00000394888 TC2NQ8N9U0 490 aa17.62■□□□□ 0.41
CPSF7-202ENST00000394888 ANKRD2Q9GZV1 360 aa17.62■□□□□ 0.41
CPSF7-202ENST00000394888 SAMSN1Q9NSI8 373 aaKnown RBP17.62■□□□□ 0.41
CPSF7-202ENST00000394888 ARPP21Q9UBL0 812 aaPredicted RBP17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms