RNA–Protein interactions for RNA: ENST00000394611.6

RTN4-206, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,161 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-206ENST00000394611 TXLNAP40222 546 aa9.96□□□□□ -0.81
RTN4-206ENST00000394611 VSNL1P62760 191 aa9.96□□□□□ -0.81
RTN4-206ENST00000394611 ACTN3Q08043 901 aaPredicted RBP9.96□□□□□ -0.81
RTN4-206ENST00000394611 CASP8Q14790 479 aa9.96□□□□□ -0.81
RTN4-206ENST00000394611 CEP112Q8N8E3 955 aa9.96□□□□□ -0.81
RTN4-206ENST00000394611 TM6SF1Q9BZW5 370 aa9.96□□□□□ -0.81
RTN4-206ENST00000394611 EHD4Q9H223 541 aa9.96□□□□□ -0.81
RTN4-206ENST00000394611 TADA3O75528 432 aa9.96□□□□□ -0.82
RTN4-206ENST00000394611 HSPD1P10809 573 aaKnown RBP9.96□□□□□ -0.82
RTN4-206ENST00000394611 MAP2K2P36507 400 aa9.96□□□□□ -0.82
RTN4-206ENST00000394611 EPS15P42566 896 aa9.96□□□□□ -0.82
RTN4-206ENST00000394611 STIM1Q13586 685 aa9.96□□□□□ -0.82
RTN4-206ENST00000394611 NYAP1Q6ZVC0 841 aa9.96□□□□□ -0.82
RTN4-206ENST00000394611 LINC00301Q8NCQ3 95 aa9.96□□□□□ -0.82
RTN4-206ENST00000394611 UHMK1Q8TAS1 419 aaKnown RBP9.96□□□□□ -0.82
RTN4-206ENST00000394611 FAM89AQ96GI7 184 aa9.96□□□□□ -0.82
RTN4-206ENST00000394611 MPHOSPH8Q99549 860 aa9.96□□□□□ -0.82
RTN4-206ENST00000394611 MRPL44Q9H9J2 332 aaKnown RBP9.96□□□□□ -0.82
RTN4-206ENST00000394611 VAT1LQ9HCJ6 419 aa9.96□□□□□ -0.82
RTN4-206ENST00000394611 ASAP1Q9ULH1 1129 aa9.96□□□□□ -0.82
RTN4-206ENST00000394611 TRIM37O94972 964 aa9.96□□□□□ -0.82
RTN4-206ENST00000394611 GBP2P32456 591 aaPredicted RBP9.96□□□□□ -0.82
RTN4-206ENST00000394611 LLGL1Q15334 1064 aa9.96□□□□□ -0.82
RTN4-206ENST00000394611 SPA17Q15506 151 aa9.96□□□□□ -0.82
RTN4-206ENST00000394611 ICE2Q659A1 982 aa9.96□□□□□ -0.82
RTN4-206ENST00000394611 PROCA1Q8NCQ7 364 aaPredicted RBP9.96□□□□□ -0.82
RTN4-206ENST00000394611 TBC1D31Q96DN5 1066 aa9.96□□□□□ -0.82
RTN4-206ENST00000394611 MMRN2Q9H8L6 949 aa9.96□□□□□ -0.82
RTN4-206ENST00000394611 SMARCAL1Q9NZC9 954 aa9.96□□□□□ -0.82
RTN4-206ENST00000394611 ELP1O95163 1332 aa9.95□□□□□ -0.82
RTN4-206ENST00000394611 TMCO5BA8MYB1 307 aa9.95□□□□□ -0.82
RTN4-206ENST00000394611 KIF28PB7ZC32 967 aa9.95□□□□□ -0.82
RTN4-206ENST00000394611 TBC1D8O95759 1140 aa9.95□□□□□ -0.82
RTN4-206ENST00000394611 PRR29P0C7W0 189 aa9.95□□□□□ -0.82
RTN4-206ENST00000394611 C2orf54Q08AI8 447 aa9.95□□□□□ -0.82
RTN4-206ENST00000394611 LDHAL6AQ6ZMR3 332 aa9.95□□□□□ -0.82
RTN4-206ENST00000394611 VPS54Q9P1Q0 977 aa9.95□□□□□ -0.82
RTN4-206ENST00000394611 GOLGA6BA6NDN3 693 aa9.95□□□□□ -0.82
RTN4-206ENST00000394611 CDKL5O76039 1030 aa9.95□□□□□ -0.82
RTN4-206ENST00000394611 EIF4A1P60842 406 aaKnown RBP9.95□□□□□ -0.82
RTN4-206ENST00000394611 POSTNQ15063 836 aa9.95□□□□□ -0.82
RTN4-206ENST00000394611 SRLQ86TD4 932 aa9.95□□□□□ -0.82
RTN4-206ENST00000394611 IMPACTQ9P2X3 320 aa9.95□□□□□ -0.82
RTN4-206ENST00000394611 RCOR1Q9UKL0 485 aa9.95□□□□□ -0.82
RTN4-206ENST00000394611 SLC4A4Q9Y6R1 1079 aa9.95□□□□□ -0.82
RTN4-206ENST00000394611 CARMIL3Q8ND23 1372 aa9.95□□□□□ -0.82
RTN4-206ENST00000394611 ZAP70P43403 619 aa9.95□□□□□ -0.82
RTN4-206ENST00000394611 PPARAQ07869 468 aa9.95□□□□□ -0.82
RTN4-206ENST00000394611 FAM196AQ6ZSG2 479 aa9.95□□□□□ -0.82
RTN4-206ENST00000394611 PPM1EQ8WY54 764 aa9.95□□□□□ -0.82
RTN4-206ENST00000394611 CCDC114Q96M63 670 aa9.95□□□□□ -0.82
RTN4-206ENST00000394611 SIPA1L3O60292 1781 aaPredicted RBP9.95□□□□□ -0.82
RTN4-206ENST00000394611 ADORA1P30542 326 aa9.94□□□□□ -0.82
RTN4-206ENST00000394611 PDCLQ13371 301 aa9.94□□□□□ -0.82
RTN4-206ENST00000394611 CACNA2D4Q7Z3S7 1137 aa9.94□□□□□ -0.82
RTN4-206ENST00000394611 KRI1Q8N9T8 703 aaKnown RBP9.94□□□□□ -0.82
RTN4-206ENST00000394611 FBXO18Q8NFZ0 1043 aa9.94□□□□□ -0.82
RTN4-206ENST00000394611 ADCY9O60503 1353 aa9.94□□□□□ -0.82
RTN4-206ENST00000394611 ESYT3A0FGR9 886 aa9.94□□□□□ -0.82
RTN4-206ENST00000394611 PSDA5PKW4 1024 aaPredicted RBP9.94□□□□□ -0.82
RTN4-206ENST00000394611 XBP1P17861 261 aa9.94□□□□□ -0.82
RTN4-206ENST00000394611 NF2P35240 595 aa9.94□□□□□ -0.82
RTN4-206ENST00000394611 NOP2P46087 812 aaKnown RBP9.94□□□□□ -0.82
RTN4-206ENST00000394611 NOA1Q8NC60 698 aaKnown RBP9.94□□□□□ -0.82
RTN4-206ENST00000394611 SYNRGQ9UMZ2 1314 aa9.94□□□□□ -0.82
RTN4-206ENST00000394611 BCL9O00512 1426 aa9.94□□□□□ -0.82
RTN4-206ENST00000394611 GOLGA6L9A6NEM1 432 aa9.94□□□□□ -0.82
RTN4-206ENST00000394611 BUB1O43683 1085 aa9.94□□□□□ -0.82
RTN4-206ENST00000394611 NEBLO76041 1014 aa9.94□□□□□ -0.82
RTN4-206ENST00000394611 MYCNP04198 464 aaPredicted RBP9.94□□□□□ -0.82
RTN4-206ENST00000394611 PPP2R5AQ15172 486 aa9.94□□□□□ -0.82
RTN4-206ENST00000394611 ZNF790Q6PG37 636 aa9.94□□□□□ -0.82
RTN4-206ENST00000394611 USP49Q70CQ1 688 aa9.94□□□□□ -0.82
RTN4-206ENST00000394611 ANKRD18AQ8IVF6 992 aa9.94□□□□□ -0.82
RTN4-206ENST00000394611 KLHL7Q8IXQ5 586 aa9.94□□□□□ -0.82
RTN4-206ENST00000394611 PNKPQ96T60 521 aa9.94□□□□□ -0.82
RTN4-206ENST00000394611 BRMS1Q9HCU9 246 aa9.94□□□□□ -0.82
RTN4-206ENST00000394611 ATG3Q9NT62 314 aa9.94□□□□□ -0.82
RTN4-206ENST00000394611 SBF2Q86WG5 1849 aa9.94□□□□□ -0.82
RTN4-206ENST00000394611 GPAA1O43292 621 aa9.93□□□□□ -0.82
RTN4-206ENST00000394611 BUB1BO60566 1050 aaPredicted RBP9.93□□□□□ -0.82
RTN4-206ENST00000394611 FGAP02671 866 aa9.93□□□□□ -0.82
RTN4-206ENST00000394611 USP8P40818 1118 aa9.93□□□□□ -0.82
RTN4-206ENST00000394611 PDE4BQ07343 736 aa9.93□□□□□ -0.82
RTN4-206ENST00000394611 BICDL1Q6ZP65 573 aa9.93□□□□□ -0.82
RTN4-206ENST00000394611 PNMA8AQ86V59 439 aaPredicted RBP9.93□□□□□ -0.82
RTN4-206ENST00000394611 FMR1NBQ8N0W7 255 aaPredicted RBP9.93□□□□□ -0.82
RTN4-206ENST00000394611 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.93□□□□□ -0.82
RTN4-206ENST00000394611 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.93□□□□□ -0.822e-6■□□□□ 10
RTN4-206ENST00000394611 PARP3Q9Y6F1 533 aa9.93□□□□□ -0.82
RTN4-206ENST00000394611 MRC1P22897 1456 aa9.93□□□□□ -0.82
RTN4-206ENST00000394611 NLRP5P59047 1200 aa9.93□□□□□ -0.82
RTN4-206ENST00000394611 GRIN1Q05586 938 aa9.93□□□□□ -0.82
RTN4-206ENST00000394611 SRGAP1Q7Z6B7 1085 aa9.93□□□□□ -0.82
RTN4-206ENST00000394611 ADAT2Q7Z6V5 191 aaKnown RBP9.93□□□□□ -0.82
RTN4-206ENST00000394611 SH2D3CQ8N5H7 860 aa9.93□□□□□ -0.82
RTN4-206ENST00000394611 PFKFB2O60825 505 aa9.93□□□□□ -0.82
RTN4-206ENST00000394611 KIF4AO95239 1232 aa9.93□□□□□ -0.82
RTN4-206ENST00000394611 USP5P45974 858 aa9.93□□□□□ -0.82
RTN4-206ENST00000394611 KCNQ4P56696 695 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms