RNA–Protein interactions for RNA: ENST00000394185.6

CLDND1-204, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLDND1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-204ENST00000394185 NR5A1Q13285 461 aa20.75■□□□□ 0.91
CLDND1-204ENST00000394185 HHIPL2Q6UWX4 724 aa20.75■□□□□ 0.91
CLDND1-204ENST00000394185 DGKHQ86XP1 1220 aa20.75■□□□□ 0.91
CLDND1-204ENST00000394185 DIS3L2Q8IYB7 885 aaKnown RBP20.75■□□□□ 0.91
CLDND1-204ENST00000394185 TTLL6Q8N841 843 aa20.75■□□□□ 0.91
CLDND1-204ENST00000394185 RGS22Q8NE09 1264 aa20.75■□□□□ 0.91
CLDND1-204ENST00000394185 CTCFLQ8NI51 663 aaPredicted RBP20.75■□□□□ 0.91
CLDND1-204ENST00000394185 OXER1Q8TDS5 423 aa20.75■□□□□ 0.91
CLDND1-204ENST00000394185 RBM28Q9NW13 759 aaKnown RBP20.75■□□□□ 0.91
CLDND1-204ENST00000394185 ZNF646O15015 1829 aaPredicted RBP20.75■□□□□ 0.91
CLDND1-204ENST00000394185 PPIP5K2O43314 1243 aa20.75■□□□□ 0.91
CLDND1-204ENST00000394185 VEGFAP15692 232 aaPredicted RBP20.75■□□□□ 0.91
CLDND1-204ENST00000394185 ZFPM1Q8IX07 1006 aa20.75■□□□□ 0.91
CLDND1-204ENST00000394185 CCAR1Q8IX12 1150 aaKnown RBP20.75■□□□□ 0.91
CLDND1-204ENST00000394185 STAG2Q8N3U4 1231 aa20.75■□□□□ 0.91
CLDND1-204ENST00000394185 STK38Q15208 465 aa20.74■□□□□ 0.91
CLDND1-204ENST00000394185 ANO1Q5XXA6 986 aa20.74■□□□□ 0.91
CLDND1-204ENST00000394185 NUP62CLQ9H1M0 184 aa20.74■□□□□ 0.91
CLDND1-204ENST00000394185 PRPF3O43395 683 aaKnown RBP20.73■□□□□ 0.91
CLDND1-204ENST00000394185 SF3A1Q15459 793 aaKnown RBP20.73■□□□□ 0.91
CLDND1-204ENST00000394185 CKAP2LQ8IYA6 745 aa20.73■□□□□ 0.91
CLDND1-204ENST00000394185 TMEM47Q9BQJ4 181 aa20.73■□□□□ 0.91
CLDND1-204ENST00000394185 FUCA2Q9BTY2 467 aa20.73■□□□□ 0.91
CLDND1-204ENST00000394185 TCP11L1Q9NUJ3 509 aa20.73■□□□□ 0.91
CLDND1-204ENST00000394185 AKAP17AQ02040 695 aaKnown RBP20.73■□□□□ 0.91
CLDND1-204ENST00000394185 NOSTRINQ8IVI9 506 aa20.73■□□□□ 0.91
CLDND1-204ENST00000394185 ANKS1AQ92625 1134 aa20.73■□□□□ 0.91
CLDND1-204ENST00000394185 MARCKSP29966 332 aaPredicted RBP20.72■□□□□ 0.91
CLDND1-204ENST00000394185 GABPAQ06546 454 aa20.72■□□□□ 0.91
CLDND1-204ENST00000394185 ZDHHC15Q96MV8 337 aa20.72■□□□□ 0.91
CLDND1-204ENST00000394185 MYH6P13533 1939 aa20.72■□□□□ 0.91
CLDND1-204ENST00000394185 SPTLC2O15270 562 aa20.72■□□□□ 0.91
CLDND1-204ENST00000394185 YEATS4O95619 227 aa20.72■□□□□ 0.91
CLDND1-204ENST00000394185 RBM5P52756 815 aaKnown RBP eCLIP20.72■□□□□ 0.91
CLDND1-204ENST00000394185 SNW1Q13573 536 aaKnown RBP20.72■□□□□ 0.91
CLDND1-204ENST00000394185 SLC35G1Q2M3R5 365 aa20.72■□□□□ 0.91
CLDND1-204ENST00000394185 CEP95Q96GE4 821 aa20.72■□□□□ 0.91
CLDND1-204ENST00000394185 MAP3K14Q99558 947 aa20.72■□□□□ 0.91
CLDND1-204ENST00000394185 OSBPL5Q9H0X9 879 aaPredicted RBP20.72■□□□□ 0.91
CLDND1-204ENST00000394185 ATF5Q9Y2D1 282 aaPredicted RBP20.72■□□□□ 0.91
CLDND1-204ENST00000394185 LETM1O95202 739 aaPredicted RBP20.71■□□□□ 0.91
CLDND1-204ENST00000394185 SLC16A10Q8TF71 515 aa20.71■□□□□ 0.91
CLDND1-204ENST00000394185 ZNF287Q9HBT7 754 aa20.71■□□□□ 0.91
CLDND1-204ENST00000394185 ZNF277Q9NRM2 450 aaPredicted RBP20.71■□□□□ 0.91
CLDND1-204ENST00000394185 MAD2L2Q9UI95 211 aa20.71■□□□□ 0.91
CLDND1-204ENST00000394185 COL4A5P29400 1685 aa20.71■□□□□ 0.91
CLDND1-204ENST00000394185 TOB1P50616 345 aaPredicted RBP20.7■□□□□ 0.91
CLDND1-204ENST00000394185 TCP10Q12799 353 aa20.7■□□□□ 0.91
CLDND1-204ENST00000394185 CC2D2BQ6DHV5 1058 aa20.7■□□□□ 0.91
CLDND1-204ENST00000394185 CLEC10AQ8IUN9 316 aa20.7■□□□□ 0.91
CLDND1-204ENST00000394185 FSIP1Q8NA03 581 aa20.7■□□□□ 0.91
CLDND1-204ENST00000394185 NEDD1Q8NHV4 660 aa20.7■□□□□ 0.91
CLDND1-204ENST00000394185 TNMDQ9H2S6 317 aa20.7■□□□□ 0.91
CLDND1-204ENST00000394185 CLSTN2Q9H4D0 955 aa20.7■□□□□ 0.91
CLDND1-204ENST00000394185 DDX19AQ9NUU7 478 aaKnown RBP20.7■□□□□ 0.91
CLDND1-204ENST00000394185 A0A1B0GVL5 298 aa20.7■□□□□ 0.9
CLDND1-204ENST00000394185 FAM205CA6NFA0 338 aa20.7■□□□□ 0.9
CLDND1-204ENST00000394185 PTPAQ15257 358 aa20.7■□□□□ 0.9
CLDND1-204ENST00000394185 SAFBQ15424 915 aaKnown RBP eCLIP20.7■□□□□ 0.9
CLDND1-204ENST00000394185 KCNG4Q8TDN1 519 aa20.7■□□□□ 0.9
CLDND1-204ENST00000394185 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.69■□□□□ 0.9
CLDND1-204ENST00000394185 GOLGA8HP0CJ92 632 aa20.69■□□□□ 0.9
CLDND1-204ENST00000394185 MAP3K11Q16584 847 aa20.69■□□□□ 0.9
CLDND1-204ENST00000394185 CCDC93Q567U6 631 aa20.69■□□□□ 0.9
CLDND1-204ENST00000394185 EARS2Q5JPH6 523 aaKnown RBP20.69■□□□□ 0.9
CLDND1-204ENST00000394185 ADALQ6DHV7 355 aa20.69■□□□□ 0.9
CLDND1-204ENST00000394185 ENGASEQ8NFI3 743 aa20.69■□□□□ 0.9
CLDND1-204ENST00000394185 PHF20Q9BVI0 1012 aa20.69■□□□□ 0.9
CLDND1-204ENST00000394185 CPVLQ9H3G5 476 aa20.69■□□□□ 0.9
CLDND1-204ENST00000394185 ADAMTS3O15072 1205 aa20.69■□□□□ 0.9
CLDND1-204ENST00000394185 AKR1B1P15121 316 aa20.69■□□□□ 0.9
CLDND1-204ENST00000394185 FKBP1AP62942 108 aaKnown RBP20.69■□□□□ 0.9
CLDND1-204ENST00000394185 SLC39A14Q15043 492 aa20.69■□□□□ 0.9
CLDND1-204ENST00000394185 NPY5RQ15761 445 aa20.69■□□□□ 0.9
CLDND1-204ENST00000394185 NOM1Q5C9Z4 860 aaKnown RBP20.69■□□□□ 0.9
CLDND1-204ENST00000394185 AXDND1Q5T1B0 1012 aaPredicted RBP20.69■□□□□ 0.9
CLDND1-204ENST00000394185 FOXP1Q9H334 677 aaPredicted RBP20.69■□□□□ 0.9
CLDND1-204ENST00000394185 KIF5BP33176 963 aa20.68■□□□□ 0.9
CLDND1-204ENST00000394185 NT5C2P49902 561 aa20.68■□□□□ 0.9
CLDND1-204ENST00000394185 GRM4Q14833 912 aa20.68■□□□□ 0.9
CLDND1-204ENST00000394185 SUPT20HQ8NEM7 779 aa20.68■□□□□ 0.9
CLDND1-204ENST00000394185 SERPINB13Q9UIV8 391 aa20.68■□□□□ 0.9
CLDND1-204ENST00000394185 FAM196BA6NMK8 535 aa20.68■□□□□ 0.9
CLDND1-204ENST00000394185 CYTH3O43739 400 aa20.68■□□□□ 0.9
CLDND1-204ENST00000394185 NDUFA8P51970 172 aa20.68■□□□□ 0.9
CLDND1-204ENST00000394185 EIF6P56537 245 aaKnown RBP20.68■□□□□ 0.9
CLDND1-204ENST00000394185 FAM198AQ9UFP1 575 aa20.68■□□□□ 0.9
CLDND1-204ENST00000394185 RAD17O75943 681 aa20.67■□□□□ 0.9
CLDND1-204ENST00000394185 SHMT1P34896 483 aa20.67■□□□□ 0.9
CLDND1-204ENST00000394185 MRPS27Q92552 414 aaKnown RBP20.67■□□□□ 0.9
CLDND1-204ENST00000394185 CABP5Q9NP86 173 aa20.67■□□□□ 0.9
CLDND1-204ENST00000394185 DDTLA6NHG4 134 aaPredicted RBP20.66■□□□□ 0.9
CLDND1-204ENST00000394185 SCG2P13521 617 aa20.66■□□□□ 0.9
CLDND1-204ENST00000394185 FAM160A1Q05DH4 1040 aa20.66■□□□□ 0.9
CLDND1-204ENST00000394185 CCDC178Q5BJE1 867 aa20.66■□□□□ 0.9
CLDND1-204ENST00000394185 CCDC73Q6ZRK6 1079 aa20.66■□□□□ 0.9
CLDND1-204ENST00000394185 RBM43Q6ZSC3 357 aaKnown RBP20.66■□□□□ 0.9
CLDND1-204ENST00000394185 GPKOWQ92917 476 aaPredicted RBP eCLIP20.66■□□□□ 0.9
CLDND1-204ENST00000394185 DNAJC18Q9H819 358 aa20.66■□□□□ 0.9
CLDND1-204ENST00000394185 ATP2B1P20020 1258 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms