RNA–Protein interactions for RNA: ENST00000394180.6

CLDND1-202, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDND1, Length 2,228 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-202ENST00000394180 KIAA0754O94854 1291 aa24.61■■□□□ 1.53
CLDND1-202ENST00000394180 CYP21A2P08686 494 aa24.61■■□□□ 1.53
CLDND1-202ENST00000394180 CCDC50Q8IVM0 306 aa24.61■■□□□ 1.53
CLDND1-202ENST00000394180 TRIML1Q8N9V2 468 aa24.61■■□□□ 1.53
CLDND1-202ENST00000394180 JPH2Q9BR39 696 aaPredicted RBP24.61■■□□□ 1.53
CLDND1-202ENST00000394180 EPB41P11171 864 aaKnown RBP24.6■■□□□ 1.53
CLDND1-202ENST00000394180 NF2P35240 595 aa24.6■■□□□ 1.53
CLDND1-202ENST00000394180 TEX11Q8IYF3 940 aa24.6■■□□□ 1.53
CLDND1-202ENST00000394180 SRRM3A6NNA2 597 aaPredicted RBP24.59■■□□□ 1.53
CLDND1-202ENST00000394180 MEFVO15553 781 aaPredicted RBP24.59■■□□□ 1.53
CLDND1-202ENST00000394180 CRKLP46109 303 aaKnown RBP24.59■■□□□ 1.53
CLDND1-202ENST00000394180 SMTNP53814 917 aa24.59■■□□□ 1.53
CLDND1-202ENST00000394180 GRIPAP1Q4V328 841 aa24.59■■□□□ 1.53
CLDND1-202ENST00000394180 UBE3BQ7Z3V4 1068 aa24.59■■□□□ 1.53
CLDND1-202ENST00000394180 ZKSCAN4Q969J2 545 aaPredicted RBP24.59■■□□□ 1.53
CLDND1-202ENST00000394180 ZBTB3Q9H5J0 574 aa24.59■■□□□ 1.53
CLDND1-202ENST00000394180 GRIN2DO15399 1336 aa24.59■■□□□ 1.53
CLDND1-202ENST00000394180 SLC35F6Q8N357 371 aa24.59■■□□□ 1.53
CLDND1-202ENST00000394180 EAF2Q96CJ1 260 aaPredicted RBP24.59■■□□□ 1.53
CLDND1-202ENST00000394180 IRX2Q9BZI1 471 aaPredicted RBP24.59■■□□□ 1.53
CLDND1-202ENST00000394180 LZTFL1Q9NQ48 299 aa24.59■■□□□ 1.53
CLDND1-202ENST00000394180 CAPN7Q9Y6W3 813 aa24.59■■□□□ 1.53
CLDND1-202ENST00000394180 PDIA3P30101 505 aaKnown RBP24.58■■□□□ 1.53
CLDND1-202ENST00000394180 INTS5Q6P9B9 1019 aaKnown RBP24.58■■□□□ 1.53
CLDND1-202ENST00000394180 RAD9BQ6WBX8 426 aa24.58■■□□□ 1.53
CLDND1-202ENST00000394180 NT5DC1Q5TFE4 455 aa24.58■■□□□ 1.52
CLDND1-202ENST00000394180 OTUD6BQ8N6M0 293 aa24.58■■□□□ 1.52
CLDND1-202ENST00000394180 LINC00116Q8NCU8 138 aa24.58■■□□□ 1.52
CLDND1-202ENST00000394180 OPA1O60313 960 aa24.57■■□□□ 1.52
CLDND1-202ENST00000394180 CLSTN1O94985 981 aa24.57■■□□□ 1.52
CLDND1-202ENST00000394180 FDPSP14324 419 aaKnown RBP24.57■■□□□ 1.52
CLDND1-202ENST00000394180 G3BP1Q13283 466 aaKnown RBP eCLIP24.57■■□□□ 1.52
CLDND1-202ENST00000394180 CCDC102BQ68D86 513 aa24.57■■□□□ 1.52
CLDND1-202ENST00000394180 PPFIBP1Q86W92 1011 aa24.57■■□□□ 1.52
CLDND1-202ENST00000394180 TMTC1Q8IUR5 882 aa24.57■■□□□ 1.52
CLDND1-202ENST00000394180 CNGA4Q8IV77 575 aa24.57■■□□□ 1.52
CLDND1-202ENST00000394180 MYD88Q99836 296 aa24.57■■□□□ 1.52
CLDND1-202ENST00000394180 IGKV5-2P06315 115 aa24.57■■□□□ 1.52
CLDND1-202ENST00000394180 CKAP4Q07065 602 aaKnown RBP24.57■■□□□ 1.52
CLDND1-202ENST00000394180 NOA1Q8NC60 698 aaKnown RBP24.57■■□□□ 1.52
CLDND1-202ENST00000394180 PLBD2Q8NHP8 589 aa24.57■■□□□ 1.52
CLDND1-202ENST00000394180 FAXDC2Q96IV6 333 aa24.57■■□□□ 1.52
CLDND1-202ENST00000394180 C8orf76Q96K31 380 aa24.57■■□□□ 1.52
CLDND1-202ENST00000394180 MYH14Q7Z406 1995 aaKnown RBP24.56■■□□□ 1.52
CLDND1-202ENST00000394180 SOWAHDA6NJG2 315 aa24.56■■□□□ 1.52
CLDND1-202ENST00000394180 AGPSO00116 658 aa24.56■■□□□ 1.52
CLDND1-202ENST00000394180 SASH1O94885 1247 aa24.56■■□□□ 1.52
CLDND1-202ENST00000394180 ATP5JP18859 108 aa24.56■■□□□ 1.52
CLDND1-202ENST00000394180 GGCXP38435 758 aa24.56■■□□□ 1.52
CLDND1-202ENST00000394180 MCMDC2Q4G0Z9 681 aa24.56■■□□□ 1.52
CLDND1-202ENST00000394180 RESP18Q5W5W9 173 aa24.56■■□□□ 1.52
CLDND1-202ENST00000394180 ANKRD18AQ8IVF6 992 aa24.56■■□□□ 1.52
CLDND1-202ENST00000394180 CCDC87Q9NVE4 849 aa24.56■■□□□ 1.52
CLDND1-202ENST00000394180 ITIH6Q6UXX5 1313 aa24.56■■□□□ 1.52
CLDND1-202ENST00000394180 COL15A1P39059 1388 aa24.56■■□□□ 1.52
CLDND1-202ENST00000394180 H0YHG0 523 aa24.55■■□□□ 1.52
CLDND1-202ENST00000394180 ERCC5P28715 1186 aaPredicted RBP24.55■■□□□ 1.52
CLDND1-202ENST00000394180 METTL22Q9BUU2 404 aaPredicted RBP24.55■■□□□ 1.52
CLDND1-202ENST00000394180 CCNL1Q9UK58 526 aaPredicted RBP24.55■■□□□ 1.52
CLDND1-202ENST00000394180 ATP5J2-PTCD1G3V325 749 aa24.55■■□□□ 1.52
CLDND1-202ENST00000394180 SEMA3EO15041 775 aa24.55■■□□□ 1.52
CLDND1-202ENST00000394180 PBX1P40424 430 aa24.55■■□□□ 1.52
CLDND1-202ENST00000394180 MAP2K1Q02750 393 aaPredicted RBP24.55■■□□□ 1.52
CLDND1-202ENST00000394180 EMC10Q5UCC4 262 aa24.55■■□□□ 1.52
CLDND1-202ENST00000394180 CPLX2Q6PUV4 134 aaKnown RBP24.55■■□□□ 1.52
CLDND1-202ENST00000394180 TRAPPC11Q7Z392 1133 aa24.55■■□□□ 1.52
CLDND1-202ENST00000394180 SH3TC1Q8TE82 1336 aa24.55■■□□□ 1.52
CLDND1-202ENST00000394180 DSCC1Q9BVC3 393 aa24.55■■□□□ 1.52
CLDND1-202ENST00000394180 MROH7-TTC4A0A0A0MT08 1334 aa24.54■■□□□ 1.52
CLDND1-202ENST00000394180 UTYO14607 1347 aa24.54■■□□□ 1.52
CLDND1-202ENST00000394180 ISM2Q6H9L7 571 aa24.54■■□□□ 1.52
CLDND1-202ENST00000394180 CTAGE1Q96RT6 745 aa24.54■■□□□ 1.52
CLDND1-202ENST00000394180 EIF4ENIF1Q9NRA8 985 aaKnown RBP24.54■■□□□ 1.52
CLDND1-202ENST00000394180 GOLGA6BA6NDN3 693 aa24.54■■□□□ 1.52
CLDND1-202ENST00000394180 MTF1Q14872 753 aa24.54■■□□□ 1.52
CLDND1-202ENST00000394180 LINS1Q8NG48 757 aa24.54■■□□□ 1.52
CLDND1-202ENST00000394180 BOLA2Q9H3K6 86 aa24.54■■□□□ 1.52
CLDND1-202ENST00000394180 NFE2L3Q9Y4A8 694 aa24.54■■□□□ 1.52
CLDND1-202ENST00000394180 ARFGEF2Q9Y6D5 1785 aa24.54■■□□□ 1.52
CLDND1-202ENST00000394180 MFAP3LO75121 409 aa24.53■■□□□ 1.52
CLDND1-202ENST00000394180 SMIM5Q71RC9 77 aa24.53■■□□□ 1.52
CLDND1-202ENST00000394180 WWC3Q9ULE0 1092 aa24.53■■□□□ 1.52
CLDND1-202ENST00000394180 ODF2LQ9ULJ1 636 aa24.53■■□□□ 1.52
CLDND1-202ENST00000394180 PSMD14O00487 310 aa24.53■■□□□ 1.52
CLDND1-202ENST00000394180 CCNI2Q6ZMN8 369 aaPredicted RBP24.53■■□□□ 1.52
CLDND1-202ENST00000394180 METTL16Q86W50 562 aaKnown RBP24.53■■□□□ 1.52
CLDND1-202ENST00000394180 TBC1D2BQ9UPU7 963 aa24.53■■□□□ 1.52
CLDND1-202ENST00000394180 IL6STP40189 918 aaPredicted RBP24.52■■□□□ 1.52
CLDND1-202ENST00000394180 GNGT1P63211 74 aa24.52■■□□□ 1.52
CLDND1-202ENST00000394180 NEXNQ0ZGT2 675 aa24.52■■□□□ 1.52
CLDND1-202ENST00000394180 PNOCQ13519 176 aa24.52■■□□□ 1.52
CLDND1-202ENST00000394180 ZKSCAN8Q15776 578 aaPredicted RBP24.52■■□□□ 1.52
CLDND1-202ENST00000394180 ZNF662Q6ZS27 426 aa24.52■■□□□ 1.52
CLDND1-202ENST00000394180 STOX1Q6ZVD7 989 aa24.52■■□□□ 1.52
CLDND1-202ENST00000394180 TAX1BP1Q86VP1 789 aa24.52■■□□□ 1.52
CLDND1-202ENST00000394180 VCPKMTQ9H867 229 aa24.52■■□□□ 1.52
CLDND1-202ENST00000394180 KLC4Q9NSK0 619 aa24.52■■□□□ 1.52
CLDND1-202ENST00000394180 FAM184BQ9ULE4 1060 aa24.52■■□□□ 1.52
CLDND1-202ENST00000394180 PCDHA5Q9Y5H7 936 aa24.52■■□□□ 1.52
CLDND1-202ENST00000394180 COL5A3P25940 1745 aaPredicted RBP24.51■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms