RNA–Protein interactions for RNA: ENST00000393888.1

CNP-201, Transcript of 2',3'-cyclic nucleotide 3' phosphodiesterase, humanhuman

TSL 1 (best) BASIC

Gene CNP, Length 2,583 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNP-201ENST00000393888 RABEP2Q9H5N1 569 aa18.6■□□□□ 0.57
CNP-201ENST00000393888 CTNND2Q9UQB3 1225 aa18.6■□□□□ 0.57
CNP-201ENST00000393888 JRKLQ9Y4A0 524 aa18.6■□□□□ 0.57
CNP-201ENST00000393888 C1orf167Q5SNV9 1468 aa18.6■□□□□ 0.57
CNP-201ENST00000393888 ADD2P35612 726 aa18.6■□□□□ 0.57
CNP-201ENST00000393888 CNGA4Q8IV77 575 aa18.6■□□□□ 0.57
CNP-201ENST00000393888 SPATA20Q8TB22 786 aa18.6■□□□□ 0.57
CNP-201ENST00000393888 CAPZA3Q96KX2 299 aa18.6■□□□□ 0.57
CNP-201ENST00000393888 GBP3Q9H0R5 595 aa18.6■□□□□ 0.57
CNP-201ENST00000393888 PIH1D3Q9NQM4 214 aaKnown RBP18.6■□□□□ 0.57
CNP-201ENST00000393888 MKRN1Q9UHC7 482 aaKnown RBP18.6■□□□□ 0.57
CNP-201ENST00000393888 SRPRBQ9Y5M8 271 aaKnown RBP18.6■□□□□ 0.57
CNP-201ENST00000393888 SPEF2Q9C093 1822 aa18.59■□□□□ 0.57
CNP-201ENST00000393888 CSB-PGBD3P0DP91 1061 aa18.59■□□□□ 0.57
CNP-201ENST00000393888 CORO7P57737 925 aa18.59■□□□□ 0.57
CNP-201ENST00000393888 CDKAL1Q5VV42 579 aa18.59■□□□□ 0.57
CNP-201ENST00000393888 CADPS2Q86UW7 1296 aa18.59■□□□□ 0.57
CNP-201ENST00000393888 AFAP1L1Q8TED9 768 aa18.59■□□□□ 0.57
CNP-201ENST00000393888 ABHD10Q9NUJ1 306 aa18.59■□□□□ 0.57
CNP-201ENST00000393888 MST1RQ04912 1400 aa18.59■□□□□ 0.57
CNP-201ENST00000393888 N4BP3O15049 544 aa18.59■□□□□ 0.57
CNP-201ENST00000393888 RILPL1Q5EBL4 403 aa18.59■□□□□ 0.57
CNP-201ENST00000393888 PAGE5Q96GU1 130 aa18.59■□□□□ 0.57
CNP-201ENST00000393888 TMEM87BQ96K49 555 aa18.59■□□□□ 0.57
CNP-201ENST00000393888 BLZF1Q9H2G9 400 aa18.59■□□□□ 0.57
CNP-201ENST00000393888 ZNF532Q9HCE3 1301 aa18.59■□□□□ 0.57
CNP-201ENST00000393888 SLIT3O75094 1523 aa18.58■□□□□ 0.57
CNP-201ENST00000393888 MEGF6O75095 1541 aa18.58■□□□□ 0.57
CNP-201ENST00000393888 PPP1R3GB7ZBB8 358 aa18.58■□□□□ 0.57
CNP-201ENST00000393888 AMPD2Q01433 879 aa18.58■□□□□ 0.57
CNP-201ENST00000393888 FAM89AQ96GI7 184 aa18.58■□□□□ 0.57
CNP-201ENST00000393888 MMS19Q96T76 1030 aa18.58■□□□□ 0.57
CNP-201ENST00000393888 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.58■□□□□ 0.57
CNP-201ENST00000393888 TAB2Q9NYJ8 693 aa18.58■□□□□ 0.57
CNP-201ENST00000393888 PHRF1Q9P1Y6 1649 aaKnown RBP18.58■□□□□ 0.57
CNP-201ENST00000393888 MYO5AQ9Y4I1 1855 aaKnown RBP18.58■□□□□ 0.56
CNP-201ENST00000393888 hCG_1642624A0A1W2PR95 340 aa18.58■□□□□ 0.56
CNP-201ENST00000393888 KRT31Q15323 416 aa18.58■□□□□ 0.56
CNP-201ENST00000393888 KANK3Q6NY19 840 aa18.58■□□□□ 0.56
CNP-201ENST00000393888 SYNE4Q8N205 404 aa18.58■□□□□ 0.56
CNP-201ENST00000393888 CCDC148Q8NFR7 591 aa18.58■□□□□ 0.56
CNP-201ENST00000393888 TUBB2AQ13885 445 aa18.57■□□□□ 0.56
CNP-201ENST00000393888 TMTC1Q8IUR5 882 aa18.57■□□□□ 0.56
CNP-201ENST00000393888 MSL3Q8N5Y2 521 aaKnown RBP18.57■□□□□ 0.56
CNP-201ENST00000393888 NUP133Q8WUM0 1156 aa18.57■□□□□ 0.56
CNP-201ENST00000393888 DCAF5Q96JK2 942 aa18.57■□□□□ 0.56
CNP-201ENST00000393888 TUBB2BQ9BVA1 445 aa18.57■□□□□ 0.56
CNP-201ENST00000393888 ACBD3Q9H3P7 528 aa18.57■□□□□ 0.56
CNP-201ENST00000393888 MED4Q9NPJ6 270 aa18.57■□□□□ 0.56
CNP-201ENST00000393888 SART3Q15020 963 aaKnown RBP18.57■□□□□ 0.56
CNP-201ENST00000393888 EARS2Q5JPH6 523 aaKnown RBP18.57■□□□□ 0.56
CNP-201ENST00000393888 STRN4Q9NRL3 753 aa18.57■□□□□ 0.56
CNP-201ENST00000393888 MAPK8IP1Q9UQF2 711 aa18.57■□□□□ 0.56
CNP-201ENST00000393888 PRPF6O94906 941 aaKnown RBP18.56■□□□□ 0.56
CNP-201ENST00000393888 IFNAR1P17181 557 aa18.56■□□□□ 0.56
CNP-201ENST00000393888 KRT9P35527 623 aa18.56■□□□□ 0.56
CNP-201ENST00000393888 SGMS1Q86VZ5 419 aa18.56■□□□□ 0.56
CNP-201ENST00000393888 SYMPKQ92797 1274 aaKnown RBP18.56■□□□□ 0.56
CNP-201ENST00000393888 CTAGE1Q96RT6 745 aa18.56■□□□□ 0.56
CNP-201ENST00000393888 HPCAL4Q9UM19 191 aa18.56■□□□□ 0.56
CNP-201ENST00000393888 REXO2Q9Y3B8 237 aaKnown RBP18.56■□□□□ 0.56
CNP-201ENST00000393888 WNT7AO00755 349 aa18.56■□□□□ 0.56
CNP-201ENST00000393888 PPFIA4O75335 1185 aa18.56■□□□□ 0.56
CNP-201ENST00000393888 ATP1A1P05023 1023 aaKnown RBP18.56■□□□□ 0.56
CNP-201ENST00000393888 GGCXP38435 758 aa18.56■□□□□ 0.56
CNP-201ENST00000393888 METTL24Q5JXM2 366 aa18.56■□□□□ 0.56
CNP-201ENST00000393888 WDR93Q6P2C0 686 aa18.56■□□□□ 0.56
CNP-201ENST00000393888 CTR9Q6PD62 1173 aa18.56■□□□□ 0.56
CNP-201ENST00000393888 CYP26C1Q6V0L0 522 aa18.56■□□□□ 0.56
CNP-201ENST00000393888 TRIM22Q8IYM9 498 aa18.56■□□□□ 0.56
CNP-201ENST00000393888 PPM1EQ8WY54 764 aa18.56■□□□□ 0.56
CNP-201ENST00000393888 MYH7P12883 1935 aa18.56■□□□□ 0.56
CNP-201ENST00000393888 TJP1Q07157 1748 aa18.56■□□□□ 0.56
CNP-201ENST00000393888 USP14P54578 494 aa18.55■□□□□ 0.56
CNP-201ENST00000393888 RTN1Q16799 776 aa18.55■□□□□ 0.56
CNP-201ENST00000393888 MICALL1Q8N3F8 863 aa18.55■□□□□ 0.56
CNP-201ENST00000393888 ZNF579Q8NAF0 562 aaKnown RBP18.55■□□□□ 0.56
CNP-201ENST00000393888 EHD4Q9H223 541 aa18.55■□□□□ 0.56
CNP-201ENST00000393888 FOXP1Q9H334 677 aaPredicted RBP18.55■□□□□ 0.56
CNP-201ENST00000393888 SLAIN2Q9P270 581 aa18.55■□□□□ 0.56
CNP-201ENST00000393888 LTBP4Q8N2S1 1624 aa18.55■□□□□ 0.56
CNP-201ENST00000393888 MYBL2P10244 700 aa18.55■□□□□ 0.56
CNP-201ENST00000393888 E2F4Q16254 413 aa18.55■□□□□ 0.56
CNP-201ENST00000393888 WASF1Q92558 559 aa18.55■□□□□ 0.56
CNP-201ENST00000393888 AIDAQ96BJ3 306 aa18.55■□□□□ 0.56
CNP-201ENST00000393888 MAP3K15Q6ZN16 1313 aa18.54■□□□□ 0.56
CNP-201ENST00000393888 STK36Q9NRP7 1315 aa18.54■□□□□ 0.56
CNP-201ENST00000393888 RRAGBQ5VZM2 374 aa18.54■□□□□ 0.56
CNP-201ENST00000393888 SMARCC1Q92922 1105 aaPredicted RBP18.54■□□□□ 0.56
CNP-201ENST00000393888 SHISA4Q96DD7 197 aa18.54■□□□□ 0.56
CNP-201ENST00000393888 EPB41L4AQ9HCS5 686 aaPredicted RBP18.54■□□□□ 0.56
CNP-201ENST00000393888 LAMB4A4D0S4 1761 aa18.54■□□□□ 0.56
CNP-201ENST00000393888 PRDM1O75626 825 aa18.54■□□□□ 0.56
CNP-201ENST00000393888 PDE6AP16499 860 aa18.54■□□□□ 0.56
CNP-201ENST00000393888 TUBB4BP68371 445 aa18.54■□□□□ 0.56
CNP-201ENST00000393888 KRT28Q7Z3Y7 464 aa18.54■□□□□ 0.56
CNP-201ENST00000393888 STIM1Q13586 685 aa18.53■□□□□ 0.56
CNP-201ENST00000393888 CHRNA2Q15822 529 aa18.53■□□□□ 0.56
CNP-201ENST00000393888 TRAPPC11Q7Z392 1133 aa18.53■□□□□ 0.56
CNP-201ENST00000393888 CCDC51Q96ER9 411 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms