RNA–Protein interactions for RNA: ENST00000393452.7

TDP1-202, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best) BASIC

Gene TDP1, Length 2,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-202ENST00000393452 UFL1O94874 794 aa10.4□□□□□ -0.74
TDP1-202ENST00000393452 PTGS1P23219 599 aa10.4□□□□□ -0.74
TDP1-202ENST00000393452 DDX60LQ5H9U9 1706 aaKnown RBP10.4□□□□□ -0.74
TDP1-202ENST00000393452 DGKHQ86XP1 1220 aa10.4□□□□□ -0.74
TDP1-202ENST00000393452 SRBD1Q8N5C6 995 aaKnown RBP10.4□□□□□ -0.74
TDP1-202ENST00000393452 AOPEPQ8N6M6 819 aa10.4□□□□□ -0.74
TDP1-202ENST00000393452 CTCFLQ8NI51 663 aaPredicted RBP10.4□□□□□ -0.74
TDP1-202ENST00000393452 GPR101Q96P66 508 aaPredicted RBP10.4□□□□□ -0.74
TDP1-202ENST00000393452 RTFDC1Q9BY42 306 aaPredicted RBP10.4□□□□□ -0.74
TDP1-202ENST00000393452 VPS54Q9P1Q0 977 aa10.4□□□□□ -0.74
TDP1-202ENST00000393452 GGA1Q9UJY5 639 aa10.4□□□□□ -0.74
TDP1-202ENST00000393452 TSPY2A6NKD2 308 aa10.4□□□□□ -0.74
TDP1-202ENST00000393452 HMGB2P26583 209 aaKnown RBP10.4□□□□□ -0.74
TDP1-202ENST00000393452 USP5P45974 858 aa10.4□□□□□ -0.74
TDP1-202ENST00000393452 ZRSR1Q15695 479 aaKnown RBP10.4□□□□□ -0.74
TDP1-202ENST00000393452 KRBA2Q6ZNG9 492 aa10.4□□□□□ -0.74
TDP1-202ENST00000393452 CCDC186Q7Z3E2 898 aa10.4□□□□□ -0.74
TDP1-202ENST00000393452 PROM2Q8N271 834 aa10.4□□□□□ -0.74
TDP1-202ENST00000393452 TNFRSF25Q93038 417 aa10.4□□□□□ -0.74
TDP1-202ENST00000393452 FAM163AQ96GL9 167 aaPredicted RBP10.4□□□□□ -0.74
TDP1-202ENST00000393452 CABP5Q9NP86 173 aa10.4□□□□□ -0.74
TDP1-202ENST00000393452 CEP131Q9UPN4 1083 aa10.4□□□□□ -0.74
TDP1-202ENST00000393452 SRPRBQ9Y5M8 271 aaKnown RBP10.4□□□□□ -0.74
TDP1-202ENST00000393452 ANKRD31Q8N7Z5 1873 aa10.4□□□□□ -0.75
TDP1-202ENST00000393452 GPR75-ASB3A0A0A6YYF3 556 aa10.39□□□□□ -0.75
TDP1-202ENST00000393452 TRIM37O94972 964 aa10.39□□□□□ -0.75
TDP1-202ENST00000393452 KRT2P35908 639 aa10.39□□□□□ -0.75
TDP1-202ENST00000393452 MDM2Q00987 491 aaPredicted RBP10.39□□□□□ -0.75
TDP1-202ENST00000393452 METTL16Q86W50 562 aaKnown RBP10.39□□□□□ -0.75
TDP1-202ENST00000393452 IL17RBQ9NRM6 502 aa10.39□□□□□ -0.75
TDP1-202ENST00000393452 TCP11L1Q9NUJ3 509 aa10.39□□□□□ -0.75
TDP1-202ENST00000393452 CLIP2Q9UDT6 1046 aa10.39□□□□□ -0.75
TDP1-202ENST00000393452 RGS17Q9UGC6 210 aaPredicted RBP10.39□□□□□ -0.75
TDP1-202ENST00000393452 POLLQ9UGP5 575 aa10.39□□□□□ -0.75
TDP1-202ENST00000393452 NRBP1Q9UHY1 535 aa10.39□□□□□ -0.75
TDP1-202ENST00000393452 PYCARDQ9ULZ3 195 aa10.39□□□□□ -0.75
TDP1-202ENST00000393452 EP400Q96L91 3159 aa10.39□□□□□ -0.75
TDP1-202ENST00000393452 NRXN2Q9P2S2 1712 aa10.39□□□□□ -0.75
TDP1-202ENST00000393452 hCG_1642624A0A1W2PR95 340 aa10.39□□□□□ -0.75
TDP1-202ENST00000393452 KIF5BP33176 963 aa10.39□□□□□ -0.75
TDP1-202ENST00000393452 GRIN1Q05586 938 aa10.39□□□□□ -0.75
TDP1-202ENST00000393452 NCAPHQ15003 741 aa10.39□□□□□ -0.75
TDP1-202ENST00000393452 LONRF3Q496Y0 759 aa10.39□□□□□ -0.75
TDP1-202ENST00000393452 TMC4Q7Z404 712 aa10.39□□□□□ -0.75
TDP1-202ENST00000393452 TBC1D16Q8TBP0 767 aa10.39□□□□□ -0.75
TDP1-202ENST00000393452 NOL10Q9BSC4 688 aaKnown RBP10.39□□□□□ -0.75
TDP1-202ENST00000393452 FAM205CA6NFA0 338 aa10.38□□□□□ -0.75
TDP1-202ENST00000393452 BIN1O00499 593 aa10.38□□□□□ -0.75
TDP1-202ENST00000393452 IKBKBO14920 756 aa10.38□□□□□ -0.75
TDP1-202ENST00000393452 TPM2P07951 284 aa10.38□□□□□ -0.75
TDP1-202ENST00000393452 TFAP4Q01664 338 aa10.38□□□□□ -0.75
TDP1-202ENST00000393452 TXNRD1Q16881 649 aa10.38□□□□□ -0.75
TDP1-202ENST00000393452 CCDC178Q5BJE1 867 aa10.38□□□□□ -0.75
TDP1-202ENST00000393452 EARS2Q5JPH6 523 aaKnown RBP10.38□□□□□ -0.75
TDP1-202ENST00000393452 FOXP4Q8IVH2 680 aaPredicted RBP10.38□□□□□ -0.75
TDP1-202ENST00000393452 DRC7Q8IY82 874 aa10.38□□□□□ -0.75
TDP1-202ENST00000393452 TGFBRAP1Q8WUH2 860 aa10.38□□□□□ -0.75
TDP1-202ENST00000393452 DYNLL2Q96FJ2 89 aa10.38□□□□□ -0.75
TDP1-202ENST00000393452 FOCADQ5VW36 1801 aa10.38□□□□□ -0.75
TDP1-202ENST00000393452 TRIM75PA6NK02 468 aa10.38□□□□□ -0.75
TDP1-202ENST00000393452 SCG2P13521 617 aa10.38□□□□□ -0.75
TDP1-202ENST00000393452 PNOCQ13519 176 aa10.38□□□□□ -0.75
TDP1-202ENST00000393452 PFKFB3Q16875 520 aaPredicted RBP10.38□□□□□ -0.75
TDP1-202ENST00000393452 CCDC144BQ3MJ40 725 aa10.38□□□□□ -0.75
TDP1-202ENST00000393452 AMOTL1Q8IY63 956 aa10.38□□□□□ -0.75
TDP1-202ENST00000393452 C17orf53Q8N3J3 647 aaPredicted RBP10.38□□□□□ -0.75
TDP1-202ENST00000393452 CNNM3Q8NE01 707 aa10.38□□□□□ -0.75
TDP1-202ENST00000393452 TBC1D22AQ8WUA7 517 aa10.38□□□□□ -0.75
TDP1-202ENST00000393452 FBXW7Q969H0 707 aa10.38□□□□□ -0.75
TDP1-202ENST00000393452 BRMS1Q9HCU9 246 aa10.38□□□□□ -0.75
TDP1-202ENST00000393452 FAM13BQ9NYF5 915 aa10.38□□□□□ -0.75
TDP1-202ENST00000393452 R3HCC1Q9Y3T6 440 aaKnown RBP10.38□□□□□ -0.75
TDP1-202ENST00000393452 MYH1P12882 1939 aa10.38□□□□□ -0.75
TDP1-202ENST00000393452 GAKO14976 1311 aa10.37□□□□□ -0.75
TDP1-202ENST00000393452 FAM205AQ6ZU69 1335 aa10.37□□□□□ -0.75
TDP1-202ENST00000393452 BMP15O95972 392 aa10.37□□□□□ -0.75
TDP1-202ENST00000393452 PLCG2P16885 1265 aa10.37□□□□□ -0.75
TDP1-202ENST00000393452 KCNA4P22459 653 aa10.37□□□□□ -0.75
TDP1-202ENST00000393452 BTDP43251 543 aa10.37□□□□□ -0.75
TDP1-202ENST00000393452 PLCD1P51178 756 aa10.37□□□□□ -0.75
TDP1-202ENST00000393452 MFSD14BQ5SR56 506 aa10.37□□□□□ -0.75
TDP1-202ENST00000393452 NT5DC1Q5TFE4 455 aa10.37□□□□□ -0.75
TDP1-202ENST00000393452 SP8Q8IXZ3 490 aa10.37□□□□□ -0.75
TDP1-202ENST00000393452 PNMA1Q8ND90 353 aa10.37□□□□□ -0.75
TDP1-202ENST00000393452 KAT14Q9H8E8 782 aa10.37□□□□□ -0.75
TDP1-202ENST00000393452 SMTNL1A8MU46 457 aa10.37□□□□□ -0.75
TDP1-202ENST00000393452 RASA1P20936 1047 aa10.37□□□□□ -0.75
TDP1-202ENST00000393452 RHBDL3P58872 404 aa10.37□□□□□ -0.75
TDP1-202ENST00000393452 SPECC1Q5M775 1068 aa10.37□□□□□ -0.75
TDP1-202ENST00000393452 CACTINQ8WUQ7 758 aaKnown RBP10.37□□□□□ -0.75
TDP1-202ENST00000393452 HSD3B7Q9H2F3 369 aa10.37□□□□□ -0.75
TDP1-202ENST00000393452 MKNK2Q9HBH9 465 aa10.37□□□□□ -0.75
TDP1-202ENST00000393452 PCDHA5Q9Y5H7 936 aa10.37□□□□□ -0.75
TDP1-202ENST00000393452 TRAPPC10P48553 1259 aa10.36□□□□□ -0.75
TDP1-202ENST00000393452 SARSP49591 514 aaKnown RBP10.36□□□□□ -0.75
TDP1-202ENST00000393452 LRMPQ12912 555 aa10.36□□□□□ -0.75
TDP1-202ENST00000393452 GRM4Q14833 912 aa10.36□□□□□ -0.75
TDP1-202ENST00000393452 SLC4A8Q2Y0W8 1093 aa10.36□□□□□ -0.75
TDP1-202ENST00000393452 C16orf86Q6ZW13 317 aa10.36□□□□□ -0.75
TDP1-202ENST00000393452 SLF2Q8IX21 1173 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 145.2 ms