RNA–Protein interactions for RNA: ENST00000393328.6

SPOP-202, Transcript of speckle type BTB/POZ protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPOP, Length 2,985 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOP-202ENST00000393328 ARFGAP3Q9NP61 516 aa12.87□□□□□ -0.35
SPOP-202ENST00000393328 CYP2D6P10635 497 aa12.87□□□□□ -0.35
SPOP-202ENST00000393328 IARSP41252 1262 aaKnown RBP12.87□□□□□ -0.35
SPOP-202ENST00000393328 PPARAQ07869 468 aa12.87□□□□□ -0.35
SPOP-202ENST00000393328 SF3B3Q15393 1217 aaKnown RBP12.87□□□□□ -0.35
SPOP-202ENST00000393328 GDAP1L1Q96MZ0 367 aa12.87□□□□□ -0.35
SPOP-202ENST00000393328 HSD3B7Q9H2F3 369 aa12.87□□□□□ -0.35
SPOP-202ENST00000393328 IMPACTQ9P2X3 320 aa12.87□□□□□ -0.35
SPOP-202ENST00000393328 COL1A1P02452 1464 aaPredicted RBP12.87□□□□□ -0.35
SPOP-202ENST00000393328 NMT2O60551 498 aa12.87□□□□□ -0.35
SPOP-202ENST00000393328 HSPA1LP34931 641 aa12.87□□□□□ -0.35
SPOP-202ENST00000393328 KRT40Q6A162 431 aa12.87□□□□□ -0.35
SPOP-202ENST00000393328 ADALQ6DHV7 355 aa12.87□□□□□ -0.35
SPOP-202ENST00000393328 SEPT12Q8IYM1 358 aa12.87□□□□□ -0.35
SPOP-202ENST00000393328 FAM217BQ9NTX9 383 aaPredicted RBP12.87□□□□□ -0.35
SPOP-202ENST00000393328 AFF2P51816 1311 aa12.86□□□□□ -0.35
SPOP-202ENST00000393328 NLRP12P59046 1061 aa12.86□□□□□ -0.35
SPOP-202ENST00000393328 LONRF3Q496Y0 759 aa12.86□□□□□ -0.35
SPOP-202ENST00000393328 FAM47AQ5JRC9 791 aa12.86□□□□□ -0.35
SPOP-202ENST00000393328 GRAMD1CQ8IYS0 662 aa12.86□□□□□ -0.35
SPOP-202ENST00000393328 TXLNBQ8N3L3 684 aa12.86□□□□□ -0.35
SPOP-202ENST00000393328 ZMYM6O95789 1325 aa12.86□□□□□ -0.35
SPOP-202ENST00000393328 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.86□□□□□ -0.35
SPOP-202ENST00000393328 USP17L12C9JPN9 530 aa12.86□□□□□ -0.35
SPOP-202ENST00000393328 USP17L21D6R901 530 aa12.86□□□□□ -0.35
SPOP-202ENST00000393328 PDE4BQ07343 736 aa12.86□□□□□ -0.35
SPOP-202ENST00000393328 WTAPQ15007 396 aa12.86□□□□□ -0.35
SPOP-202ENST00000393328 TRAPPC3LQ5T215 181 aa12.86□□□□□ -0.35
SPOP-202ENST00000393328 MYSM1Q5VVJ2 828 aa12.86□□□□□ -0.35
SPOP-202ENST00000393328 FNBP4Q8N3X1 1017 aaPredicted RBP12.86□□□□□ -0.35
SPOP-202ENST00000393328 GJD4Q96KN9 370 aaPredicted RBP12.86□□□□□ -0.35
SPOP-202ENST00000393328 WNK3Q9BYP7 1800 aa12.85□□□□□ -0.35
SPOP-202ENST00000393328 HIBADHP31937 336 aaKnown RBP12.85□□□□□ -0.35
SPOP-202ENST00000393328 KIF23Q02241 960 aaPredicted RBP12.85□□□□□ -0.35
SPOP-202ENST00000393328 MECOMQ03112 1051 aa12.85□□□□□ -0.35
SPOP-202ENST00000393328 GPS2Q13227 327 aa12.85□□□□□ -0.35
SPOP-202ENST00000393328 UBE4AQ14139 1066 aa12.85□□□□□ -0.35
SPOP-202ENST00000393328 LONRF2Q1L5Z9 754 aa12.85□□□□□ -0.35
SPOP-202ENST00000393328 UBAC1Q9BSL1 405 aa12.85□□□□□ -0.35
SPOP-202ENST00000393328 EFCAB8A8MWE9 144 aa12.85□□□□□ -0.35
SPOP-202ENST00000393328 GRIK5Q16478 980 aa12.85□□□□□ -0.35
SPOP-202ENST00000393328 DDX60Q8IY21 1712 aaKnown RBP12.85□□□□□ -0.35
SPOP-202ENST00000393328 ERICH2A1L162 156 aa12.84□□□□□ -0.35
SPOP-202ENST00000393328 TRIM37O94972 964 aa12.84□□□□□ -0.35
SPOP-202ENST00000393328 SYKP43405 635 aa12.84□□□□□ -0.35
SPOP-202ENST00000393328 DIXDC1Q155Q3 683 aa12.84□□□□□ -0.35
SPOP-202ENST00000393328 CPLX2Q6PUV4 134 aaKnown RBP12.84□□□□□ -0.35
SPOP-202ENST00000393328 FUT8Q9BYC5 575 aa12.84□□□□□ -0.35
SPOP-202ENST00000393328 CNTNAP4Q9C0A0 1308 aa12.84□□□□□ -0.35
SPOP-202ENST00000393328 BTBD18B2RXH4 712 aa12.84□□□□□ -0.35
SPOP-202ENST00000393328 PDIA4P13667 645 aaKnown RBP12.84□□□□□ -0.35
SPOP-202ENST00000393328 CCDC102AQ96A19 550 aa12.84□□□□□ -0.35
SPOP-202ENST00000393328 BAG1Q99933 345 aaPredicted RBP12.84□□□□□ -0.35
SPOP-202ENST00000393328 MRPL44Q9H9J2 332 aaKnown RBP12.84□□□□□ -0.35
SPOP-202ENST00000393328 INTS13Q9NVM9 706 aa12.84□□□□□ -0.35
SPOP-202ENST00000393328 RRP15Q9Y3B9 282 aaKnown RBP12.84□□□□□ -0.35
SPOP-202ENST00000393328 UTRNP46939 3433 aa12.84□□□□□ -0.35
SPOP-202ENST00000393328 SOWAHDA6NJG2 315 aa12.84□□□□□ -0.35
SPOP-202ENST00000393328 ABL1P00519 1130 aa12.84□□□□□ -0.35
SPOP-202ENST00000393328 KLHL10Q6JEL2 608 aa12.84□□□□□ -0.35
SPOP-202ENST00000393328 TMEM87BQ96K49 555 aa12.84□□□□□ -0.35
SPOP-202ENST00000393328 RIOK1Q9BRS2 568 aaKnown RBP12.84□□□□□ -0.35
SPOP-202ENST00000393328 FAN1Q9Y2M0 1017 aa12.84□□□□□ -0.35
SPOP-202ENST00000393328 ZNF804BA4D1E1 1349 aa12.83□□□□□ -0.35
SPOP-202ENST00000393328 PHLPP2Q6ZVD8 1323 aa12.83□□□□□ -0.35
SPOP-202ENST00000393328 SSRP1Q08945 709 aaKnown RBP12.83□□□□□ -0.36
SPOP-202ENST00000393328 NR5A1Q13285 461 aa12.83□□□□□ -0.36
SPOP-202ENST00000393328 NTRK3Q16288 839 aa12.83□□□□□ -0.36
SPOP-202ENST00000393328 RTN1Q16799 776 aa12.83□□□□□ -0.36
SPOP-202ENST00000393328 TICAM2Q86XR7 235 aa12.83□□□□□ -0.36
SPOP-202ENST00000393328 NYXQ9GZU5 481 aa12.83□□□□□ -0.36
SPOP-202ENST00000393328 RTEL1Q9NZ71 1219 aa12.83□□□□□ -0.36
SPOP-202ENST00000393328 TNKSO95271 1327 aa12.83□□□□□ -0.36
SPOP-202ENST00000393328 STX17P56962 302 aa12.83□□□□□ -0.36
SPOP-202ENST00000393328 TRIM29Q14134 588 aa12.83□□□□□ -0.36
SPOP-202ENST00000393328 ALX1Q15699 326 aa12.83□□□□□ -0.36
SPOP-202ENST00000393328 FOXP4Q8IVH2 680 aaPredicted RBP12.83□□□□□ -0.36
SPOP-202ENST00000393328 CNBD1Q8NA66 436 aa12.83□□□□□ -0.36
SPOP-202ENST00000393328 KRT23Q9C075 422 aa12.83□□□□□ -0.36
SPOP-202ENST00000393328 ATRNO75882 1429 aa12.82□□□□□ -0.36
SPOP-202ENST00000393328 TM4SF1P30408 202 aa12.82□□□□□ -0.36
SPOP-202ENST00000393328 SART3Q15020 963 aaKnown RBP12.82□□□□□ -0.36
SPOP-202ENST00000393328 ANO1Q5XXA6 986 aa12.82□□□□□ -0.36
SPOP-202ENST00000393328 PNKPQ96T60 521 aa12.82□□□□□ -0.36
SPOP-202ENST00000393328 BAZ2AQ9UIF9 1905 aaKnown RBP12.82□□□□□ -0.36
SPOP-202ENST00000393328 USP17L8P0C7I0 530 aa12.82□□□□□ -0.36
SPOP-202ENST00000393328 CASP1P29466 404 aa12.82□□□□□ -0.36
SPOP-202ENST00000393328 MYL5Q02045 173 aa12.82□□□□□ -0.36
SPOP-202ENST00000393328 DZIP1Q86YF9 867 aaKnown RBP12.82□□□□□ -0.36
SPOP-202ENST00000393328 ZNF654Q8IZM8 581 aa12.82□□□□□ -0.36
SPOP-202ENST00000393328 RGS22Q8NE09 1264 aa12.82□□□□□ -0.36
SPOP-202ENST00000393328 OXER1Q8TDS5 423 aa12.82□□□□□ -0.36
SPOP-202ENST00000393328 NSUN4Q96CB9 384 aaKnown RBP12.82□□□□□ -0.36
SPOP-202ENST00000393328 FAM205CA6NFA0 338 aa12.81□□□□□ -0.36
SPOP-202ENST00000393328 FBXO33Q7Z6M2 555 aa12.81□□□□□ -0.36
SPOP-202ENST00000393328 FBXL16Q8N461 479 aa12.81□□□□□ -0.36
SPOP-202ENST00000393328 STAG1Q8WVM7 1258 aa12.81□□□□□ -0.36
SPOP-202ENST00000393328 DRC1Q96MC2 740 aa12.81□□□□□ -0.36
SPOP-202ENST00000393328 CNNM2Q9H8M5 875 aa12.81□□□□□ -0.36
SPOP-202ENST00000393328 SAMSN1Q9NSI8 373 aaKnown RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms