RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 CCT8L2Q96SF2 557 aa8.49□□□□□ -1.05
VTI1A-201ENST00000393077 DYTNA2CJ06 578 aa8.49□□□□□ -1.05
VTI1A-201ENST00000393077 HOXC9P31274 260 aa8.49□□□□□ -1.05
VTI1A-201ENST00000393077 GJA8P48165 433 aa8.49□□□□□ -1.05
VTI1A-201ENST00000393077 CCDC122Q5T0U0 273 aa8.49□□□□□ -1.05
VTI1A-201ENST00000393077 BRAPQ7Z569 592 aa8.49□□□□□ -1.05
VTI1A-201ENST00000393077 STAMBPL1Q96FJ0 436 aa8.49□□□□□ -1.05
VTI1A-201ENST00000393077 TAOK3Q9H2K8 898 aa8.49□□□□□ -1.05
VTI1A-201ENST00000393077 UNC45AQ9H3U1 944 aa8.49□□□□□ -1.05
VTI1A-201ENST00000393077 HPCAL4Q9UM19 191 aa8.49□□□□□ -1.05
VTI1A-201ENST00000393077 RBM47A0AV96 593 aaKnown RBP8.49□□□□□ -1.05
VTI1A-201ENST00000393077 GCOM1H8Y6P7 765 aaPredicted RBP8.49□□□□□ -1.05
VTI1A-201ENST00000393077 MYO1BO43795 1136 aa8.49□□□□□ -1.05
VTI1A-201ENST00000393077 USO1O60763 962 aaKnown RBP8.49□□□□□ -1.05
VTI1A-201ENST00000393077 MYZAPP0CAP1 466 aa8.49□□□□□ -1.05
VTI1A-201ENST00000393077 FLIIQ13045 1269 aa8.49□□□□□ -1.05
VTI1A-201ENST00000393077 NCAPH2Q6IBW4 605 aa8.49□□□□□ -1.05
VTI1A-201ENST00000393077 ANKRD23Q86SG2 305 aa8.49□□□□□ -1.05
VTI1A-201ENST00000393077 CNGA4Q8IV77 575 aa8.49□□□□□ -1.05
VTI1A-201ENST00000393077 CCDC197Q8NCU1 140 aa8.49□□□□□ -1.05
VTI1A-201ENST00000393077 ZCRB1Q8TBF4 217 aaKnown RBP8.49□□□□□ -1.05
VTI1A-201ENST00000393077 SELENOSQ9BQE4 189 aa8.49□□□□□ -1.05
VTI1A-201ENST00000393077 TRIM7Q9C029 511 aa8.49□□□□□ -1.05
VTI1A-201ENST00000393077 EPN3Q9H201 632 aa8.49□□□□□ -1.05
VTI1A-201ENST00000393077 SMIM23A6NLE4 172 aa8.48□□□□□ -1.05
VTI1A-201ENST00000393077 COQ9O75208 318 aa8.48□□□□□ -1.05
VTI1A-201ENST00000393077 DPCR1Q3MIW9 517 aa8.48□□□□□ -1.05
VTI1A-201ENST00000393077 NAA35Q5VZE5 725 aa8.48□□□□□ -1.05
VTI1A-201ENST00000393077 CCDC65Q8IXS2 484 aa8.48□□□□□ -1.05
VTI1A-201ENST00000393077 KCNV2Q8TDN2 545 aa8.48□□□□□ -1.05
VTI1A-201ENST00000393077 TATDN2Q93075 761 aa8.48□□□□□ -1.05
VTI1A-201ENST00000393077 HAUS1Q96CS2 278 aa8.48□□□□□ -1.05
VTI1A-201ENST00000393077 UBAP1Q9NZ09 502 aa8.48□□□□□ -1.05
VTI1A-201ENST00000393077 MAP3K4Q9Y6R4 1608 aa8.48□□□□□ -1.05
VTI1A-201ENST00000393077 SPHKAPQ2M3C7 1700 aa8.48□□□□□ -1.05
VTI1A-201ENST00000393077 ZFYVE9O95405 1425 aa8.48□□□□□ -1.05
VTI1A-201ENST00000393077 KDM5AP29375 1690 aaKnown RBP8.48□□□□□ -1.05
VTI1A-201ENST00000393077 PFKFB2O60825 505 aa8.48□□□□□ -1.05
VTI1A-201ENST00000393077 PPP1R37O75864 691 aa8.48□□□□□ -1.05
VTI1A-201ENST00000393077 ADAMTS2O95450 1211 aa8.48□□□□□ -1.05
VTI1A-201ENST00000393077 CNGA1P29973 690 aa8.48□□□□□ -1.05
VTI1A-201ENST00000393077 PSMD7P51665 324 aa8.48□□□□□ -1.05
VTI1A-201ENST00000393077 GUCY1A3Q02108 690 aa8.48□□□□□ -1.05
VTI1A-201ENST00000393077 LONRF3Q496Y0 759 aa8.48□□□□□ -1.05
VTI1A-201ENST00000393077 CWF19L1Q69YN2 538 aaKnown RBP8.48□□□□□ -1.05
VTI1A-201ENST00000393077 C8orf74Q6P047 294 aa8.48□□□□□ -1.05
VTI1A-201ENST00000393077 RUFY4Q6ZNE9 571 aa8.48□□□□□ -1.05
VTI1A-201ENST00000393077 FUKQ8N0W3 1084 aa8.48□□□□□ -1.05
VTI1A-201ENST00000393077 TMTC2Q8N394 836 aa8.48□□□□□ -1.05
VTI1A-201ENST00000393077 AIDAQ96BJ3 306 aa8.48□□□□□ -1.05
VTI1A-201ENST00000393077 FSD1Q9BTV5 496 aa8.48□□□□□ -1.05
VTI1A-201ENST00000393077 EHD4Q9H223 541 aa8.48□□□□□ -1.05
VTI1A-201ENST00000393077 VWA3AA6NCI4 1184 aa8.48□□□□□ -1.05
VTI1A-201ENST00000393077 HIP1O00291 1037 aa8.48□□□□□ -1.05
VTI1A-201ENST00000393077 FMNL1O95466 1100 aaPredicted RBP8.48□□□□□ -1.05
VTI1A-201ENST00000393077 IDEP14735 1019 aa8.48□□□□□ -1.05
VTI1A-201ENST00000393077 TRIM21P19474 475 aaKnown RBP8.48□□□□□ -1.05
VTI1A-201ENST00000393077 APBA1Q02410 837 aa8.48□□□□□ -1.05
VTI1A-201ENST00000393077 CCDC102BQ68D86 513 aa8.48□□□□□ -1.05
VTI1A-201ENST00000393077 OLFML1Q6UWY5 402 aa8.48□□□□□ -1.05
VTI1A-201ENST00000393077 BZW1Q7L1Q6 419 aaKnown RBP8.48□□□□□ -1.05
VTI1A-201ENST00000393077 KCNG4Q8TDN1 519 aa8.48□□□□□ -1.05
VTI1A-201ENST00000393077 MAIP1Q8WWC4 291 aa8.48□□□□□ -1.05
VTI1A-201ENST00000393077 KLHL29Q96CT2 875 aa8.48□□□□□ -1.05
VTI1A-201ENST00000393077 C8orf76Q96K31 380 aa8.48□□□□□ -1.05
VTI1A-201ENST00000393077 GORASP1Q9BQQ3 440 aa8.48□□□□□ -1.05
VTI1A-201ENST00000393077 HELLSQ9NRZ9 838 aa8.48□□□□□ -1.05
VTI1A-201ENST00000393077 ZNF711Q9Y462 761 aa8.48□□□□□ -1.05
VTI1A-201ENST00000393077 RPAP1Q9BWH6 1393 aaPredicted RBP8.48□□□□□ -1.05
VTI1A-201ENST00000393077 A2ML1A8K2U0 1454 aa8.48□□□□□ -1.05
VTI1A-201ENST00000393077 INO80Q9ULG1 1556 aaPredicted RBP8.48□□□□□ -1.05
VTI1A-201ENST00000393077 HGSO14964 777 aaPredicted RBP8.48□□□□□ -1.05
VTI1A-201ENST00000393077 N4BP3O15049 544 aa8.48□□□□□ -1.05
VTI1A-201ENST00000393077 NPM3O75607 178 aaKnown RBP8.48□□□□□ -1.05
VTI1A-201ENST00000393077 PYGBP11216 843 aa8.48□□□□□ -1.05
VTI1A-201ENST00000393077 LSP1P33241 339 aa8.48□□□□□ -1.05
VTI1A-201ENST00000393077 MRPS35P82673 323 aaKnown RBP8.48□□□□□ -1.05
VTI1A-201ENST00000393077 DEUP1Q05D60 604 aa8.48□□□□□ -1.05
VTI1A-201ENST00000393077 CUL4BQ13620 913 aa8.48□□□□□ -1.05
VTI1A-201ENST00000393077 KBTBD12Q3ZCT8 623 aa8.48□□□□□ -1.05
VTI1A-201ENST00000393077 FAM133BQ5BKY9 247 aaKnown RBP8.48□□□□□ -1.05
VTI1A-201ENST00000393077 AKNAD1Q5T1N1 836 aa8.48□□□□□ -1.05
VTI1A-201ENST00000393077 ALS2CLQ60I27 953 aa8.48□□□□□ -1.05
VTI1A-201ENST00000393077 GSPT2Q8IYD1 628 aaKnown RBP8.48□□□□□ -1.05
VTI1A-201ENST00000393077 IRX2Q9BZI1 471 aaPredicted RBP8.48□□□□□ -1.05
VTI1A-201ENST00000393077 UBXN6Q9BZV1 441 aa8.48□□□□□ -1.05
VTI1A-201ENST00000393077 ZCWPW1Q9H0M4 648 aa8.48□□□□□ -1.05
VTI1A-201ENST00000393077 CWC25Q9NXE8 425 aaPredicted RBP8.48□□□□□ -1.05
VTI1A-201ENST00000393077 C15orf41Q9Y2V0 281 aa8.48□□□□□ -1.05
VTI1A-201ENST00000393077 POLR3DP05423 398 aaPredicted RBP8.47□□□□□ -1.05
VTI1A-201ENST00000393077 KRT32Q14532 448 aa8.47□□□□□ -1.05
VTI1A-201ENST00000393077 SEPT2Q15019 361 aa8.47□□□□□ -1.05
VTI1A-201ENST00000393077 RBM26Q5T8P6 1007 aaKnown RBP8.47□□□□□ -1.05
VTI1A-201ENST00000393077 GRAMD4Q6IC98 578 aa8.47□□□□□ -1.05
VTI1A-201ENST00000393077 TOGARAM2Q6ZUX3 1019 aa8.47□□□□□ -1.05
VTI1A-201ENST00000393077 IFT20Q8IY31 132 aa8.47□□□□□ -1.05
VTI1A-201ENST00000393077 P3H4Q92791 437 aa8.47□□□□□ -1.05
VTI1A-201ENST00000393077 POLD4Q9HCU8 107 aa8.47□□□□□ -1.05
VTI1A-201ENST00000393077 CORO1CQ9ULV4 474 aaPredicted RBP8.47□□□□□ -1.05
VTI1A-201ENST00000393077 CEP152O94986 1710 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms