RNA–Protein interactions for RNA: ENST00000390606.3

IGHV3-20-201, Transcript of immunoglobulin heavy variable 3-20, humanhuman

APPRIS P1 BASIC

Gene IGHV3-20, Length 415 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-20-201ENST00000390606 ALX1Q15699 326 aa26.29■■□□□ 1.8
IGHV3-20-201ENST00000390606 USP17L2Q6R6M4 530 aa26.29■■□□□ 1.8
IGHV3-20-201ENST00000390606 STK11IPQ8N1F8 1099 aa26.29■■□□□ 1.8
IGHV3-20-201ENST00000390606 KIAA1683Q9H0B3 1180 aa26.29■■□□□ 1.8
IGHV3-20-201ENST00000390606 CCDC171Q6TFL3 1326 aa26.29■■□□□ 1.8
IGHV3-20-201ENST00000390606 MYH8P13535 1937 aa26.29■■□□□ 1.8
IGHV3-20-201ENST00000390606 A0A1W2PRG0 241 aa26.28■■□□□ 1.8
IGHV3-20-201ENST00000390606 BCRP11274 1271 aa26.28■■□□□ 1.8
IGHV3-20-201ENST00000390606 RASA1P20936 1047 aa26.28■■□□□ 1.8
IGHV3-20-201ENST00000390606 PPARAQ07869 468 aa26.28■■□□□ 1.8
IGHV3-20-201ENST00000390606 SIAH1Q8IUQ4 282 aa26.28■■□□□ 1.8
IGHV3-20-201ENST00000390606 FEZ1Q99689 392 aa26.28■■□□□ 1.8
IGHV3-20-201ENST00000390606 DIAPH3Q9NSV4 1193 aa26.28■■□□□ 1.8
IGHV3-20-201ENST00000390606 HIP1O00291 1037 aa26.27■■□□□ 1.8
IGHV3-20-201ENST00000390606 HSPD1P10809 573 aaKnown RBP26.27■■□□□ 1.8
IGHV3-20-201ENST00000390606 HOXA7P31268 230 aaPredicted RBP26.27■■□□□ 1.8
IGHV3-20-201ENST00000390606 CWC27Q6UX04 472 aaKnown RBP26.27■■□□□ 1.8
IGHV3-20-201ENST00000390606 CLEC10AQ8IUN9 316 aa26.27■■□□□ 1.8
IGHV3-20-201ENST00000390606 GNL3Q9BVP2 549 aaKnown RBP eCLIP26.27■■□□□ 1.8
IGHV3-20-201ENST00000390606 PNMA3Q9UL41 463 aa26.27■■□□□ 1.8
IGHV3-20-201ENST00000390606 PABPC4Q13310 644 aaKnown RBP eCLIP26.26■■□□□ 1.79
IGHV3-20-201ENST00000390606 ZYXQ15942 572 aaKnown RBP26.26■■□□□ 1.79
IGHV3-20-201ENST00000390606 OTOP1Q7RTM1 612 aa26.26■■□□□ 1.79
IGHV3-20-201ENST00000390606 ABHD8Q96I13 439 aa26.26■■□□□ 1.79
IGHV3-20-201ENST00000390606 ASCC2Q9H1I8 757 aaPredicted RBP26.26■■□□□ 1.79
IGHV3-20-201ENST00000390606 MKNK2Q9HBH9 465 aa26.26■■□□□ 1.79
IGHV3-20-201ENST00000390606 FGAP02671 866 aa26.25■■□□□ 1.79
IGHV3-20-201ENST00000390606 USP14P54578 494 aa26.25■■□□□ 1.79
IGHV3-20-201ENST00000390606 LACTBP83111 547 aaPredicted RBP26.25■■□□□ 1.79
IGHV3-20-201ENST00000390606 TRIM17Q9Y577 477 aa26.25■■□□□ 1.79
IGHV3-20-201ENST00000390606 PRDM1O75626 825 aa26.24■■□□□ 1.79
IGHV3-20-201ENST00000390606 NEFLP07196 543 aa26.24■■□□□ 1.79
IGHV3-20-201ENST00000390606 CENPBP07199 599 aaPredicted RBP26.24■■□□□ 1.79
IGHV3-20-201ENST00000390606 OSBPP22059 807 aa26.24■■□□□ 1.79
IGHV3-20-201ENST00000390606 ICA1Q05084 483 aa26.24■■□□□ 1.79
IGHV3-20-201ENST00000390606 PKN2Q16513 984 aaKnown RBP26.24■■□□□ 1.79
IGHV3-20-201ENST00000390606 SMCR8Q8TEV9 937 aaPredicted RBP26.24■■□□□ 1.79
IGHV3-20-201ENST00000390606 ARHGAP39Q9C0H5 1083 aa26.24■■□□□ 1.79
IGHV3-20-201ENST00000390606 ANAPC4Q9UJX5 808 aa26.24■■□□□ 1.79
IGHV3-20-201ENST00000390606 GREB1LQ9C091 1923 aaPredicted RBP26.24■■□□□ 1.79
IGHV3-20-201ENST00000390606 ZMYM6O95789 1325 aa26.23■■□□□ 1.79
IGHV3-20-201ENST00000390606 CTGFP29279 349 aa26.23■■□□□ 1.79
IGHV3-20-201ENST00000390606 SKAP1Q86WV1 359 aa26.23■■□□□ 1.79
IGHV3-20-201ENST00000390606 CCDC136Q96JN2 1154 aa26.23■■□□□ 1.79
IGHV3-20-201ENST00000390606 KANSL2Q9H9L4 492 aa26.23■■□□□ 1.79
IGHV3-20-201ENST00000390606 EFCC1Q9HA90 598 aa26.23■■□□□ 1.79
IGHV3-20-201ENST00000390606 ZNF287Q9HBT7 754 aa26.23■■□□□ 1.79
IGHV3-20-201ENST00000390606 TACC3Q9Y6A5 838 aa26.23■■□□□ 1.79
IGHV3-20-201ENST00000390606 VCAM1P19320 739 aa26.22■■□□□ 1.79
IGHV3-20-201ENST00000390606 MFAP1P55081 439 aaKnown RBP26.22■■□□□ 1.79
IGHV3-20-201ENST00000390606 CTDSPL2Q05D32 466 aa26.22■■□□□ 1.79
IGHV3-20-201ENST00000390606 IFFO2Q5TF58 517 aa26.22■■□□□ 1.79
IGHV3-20-201ENST00000390606 IL25Q9H293 177 aa26.22■■□□□ 1.79
IGHV3-20-201ENST00000390606 DDX52Q9Y2R4 599 aaKnown RBP eCLIP26.22■■□□□ 1.79
IGHV3-20-201ENST00000390606 TMX2Q9Y320 296 aa26.22■■□□□ 1.79
IGHV3-20-201ENST00000390606 SLC3A2P08195 630 aaKnown RBP26.21■■□□□ 1.79
IGHV3-20-201ENST00000390606 EEF2P13639 858 aaKnown RBP26.21■■□□□ 1.79
IGHV3-20-201ENST00000390606 IRX3P78415 501 aaPredicted RBP26.21■■□□□ 1.79
IGHV3-20-201ENST00000390606 PDE4BQ07343 736 aa26.21■■□□□ 1.79
IGHV3-20-201ENST00000390606 KIAA1755Q5JYT7 1200 aa26.21■■□□□ 1.79
IGHV3-20-201ENST00000390606 FBXO46Q6PJ61 603 aaPredicted RBP26.21■■□□□ 1.79
IGHV3-20-201ENST00000390606 P2RX7Q99572 595 aaKnown RBP26.21■■□□□ 1.79
IGHV3-20-201ENST00000390606 ARHGEF10LQ9HCE6 1279 aa26.21■■□□□ 1.79
IGHV3-20-201ENST00000390606 IGKV6D-41A0A0C4DH26 115 aa26.2■■□□□ 1.78
IGHV3-20-201ENST00000390606 GCLCP48506 637 aaPredicted RBP26.2■■□□□ 1.78
IGHV3-20-201ENST00000390606 ZNF444Q8N0Y2 327 aaPredicted RBP26.2■■□□□ 1.78
IGHV3-20-201ENST00000390606 ANKRD13CQ8N6S4 541 aa26.2■■□□□ 1.78
IGHV3-20-201ENST00000390606 ZSWIM8A7E2V4 1837 aa26.2■■□□□ 1.78
IGHV3-20-201ENST00000390606 USP17L15C9J2P7 530 aa26.19■■□□□ 1.78
IGHV3-20-201ENST00000390606 USP17L13C9JLJ4 530 aa26.19■■□□□ 1.78
IGHV3-20-201ENST00000390606 USP17L11C9JVI0 530 aa26.19■■□□□ 1.78
IGHV3-20-201ENST00000390606 USP17L18D6R9N7 530 aa26.19■■□□□ 1.78
IGHV3-20-201ENST00000390606 USP17L22D6RA61 530 aa26.19■■□□□ 1.78
IGHV3-20-201ENST00000390606 USP17L17D6RBQ6 530 aa26.19■■□□□ 1.78
IGHV3-20-201ENST00000390606 USP17L19D6RCP7 530 aa26.19■■□□□ 1.78
IGHV3-20-201ENST00000390606 USP17L20D6RJB6 530 aa26.19■■□□□ 1.78
IGHV3-20-201ENST00000390606 FGRP09769 529 aa26.19■■□□□ 1.78
IGHV3-20-201ENST00000390606 CHMLP26374 656 aa26.19■■□□□ 1.78
IGHV3-20-201ENST00000390606 USP17L24Q0WX57 530 aa26.19■■□□□ 1.78
IGHV3-20-201ENST00000390606 KIF22Q14807 665 aa26.19■■□□□ 1.78
IGHV3-20-201ENST00000390606 FAM110CQ1W6H9 321 aa26.19■■□□□ 1.78
IGHV3-20-201ENST00000390606 INCENPQ9NQS7 918 aa26.19■■□□□ 1.78
IGHV3-20-201ENST00000390606 HERVK_113P62684 666 aa26.18■■□□□ 1.78
IGHV3-20-201ENST00000390606 ARHGEF6Q15052 776 aa26.18■■□□□ 1.78
IGHV3-20-201ENST00000390606 CATSPERGQ6ZRH7 1159 aa26.18■■□□□ 1.78
IGHV3-20-201ENST00000390606 NEDD1Q8NHV4 660 aa26.18■■□□□ 1.78
IGHV3-20-201ENST00000390606 TRIM47Q96LD4 638 aa26.18■■□□□ 1.78
IGHV3-20-201ENST00000390606 SH2D4AQ9H788 454 aa26.18■■□□□ 1.78
IGHV3-20-201ENST00000390606 VCPKMTQ9H867 229 aa26.18■■□□□ 1.78
IGHV3-20-201ENST00000390606 PTPN22Q9Y2R2 807 aa26.18■■□□□ 1.78
IGHV3-20-201ENST00000390606 PLIN4Q96Q06 1357 aa26.18■■□□□ 1.78
IGHV3-20-201ENST00000390606 ECM2O94769 699 aaPredicted RBP26.17■■□□□ 1.78
IGHV3-20-201ENST00000390606 PSMC4P43686 418 aa26.17■■□□□ 1.78
IGHV3-20-201ENST00000390606 POTEEQ6S8J3 1075 aa26.17■■□□□ 1.78
IGHV3-20-201ENST00000390606 DSCC1Q9BVC3 393 aa26.17■■□□□ 1.78
IGHV3-20-201ENST00000390606 RPAP3Q9H6T3 665 aaPredicted RBP26.17■■□□□ 1.78
IGHV3-20-201ENST00000390606 NYAP2Q9P242 653 aa26.17■■□□□ 1.78
IGHV3-20-201ENST00000390606 HPS5Q9UPZ3 1129 aa26.17■■□□□ 1.78
IGHV3-20-201ENST00000390606 RAD50Q92878 1312 aa26.16■■□□□ 1.78
IGHV3-20-201ENST00000390606 ATP2B2Q01814 1243 aa26.16■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms