RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 PRR36Q9H6K5 1346 aa6.09□□□□□ -1.43
TRAV40-201ENST00000390467 KIR3DL1P43629 444 aa6.09□□□□□ -1.43
TRAV40-201ENST00000390467 THAP5Q7Z6K1 395 aa6.09□□□□□ -1.43
TRAV40-201ENST00000390467 RELL1Q8IUW5 271 aa6.09□□□□□ -1.43
TRAV40-201ENST00000390467 UBE2FQ969M7 185 aa6.09□□□□□ -1.43
TRAV40-201ENST00000390467 LMCD1Q9NZU5 365 aa6.09□□□□□ -1.43
TRAV40-201ENST00000390467 ZSWIM5Q9P217 1185 aa6.09□□□□□ -1.43
TRAV40-201ENST00000390467 KLHL3Q9UH77 587 aa6.09□□□□□ -1.43
TRAV40-201ENST00000390467 TLR3O15455 904 aaKnown RBP6.08□□□□□ -1.44
TRAV40-201ENST00000390467 HTR3BO95264 441 aa6.08□□□□□ -1.44
TRAV40-201ENST00000390467 CYP7A1P22680 504 aa6.08□□□□□ -1.44
TRAV40-201ENST00000390467 ETV3P41162 512 aa6.08□□□□□ -1.44
TRAV40-201ENST00000390467 FYB2Q5VWT5 728 aa6.08□□□□□ -1.44
TRAV40-201ENST00000390467 FAM196AQ6ZSG2 479 aa6.08□□□□□ -1.44
TRAV40-201ENST00000390467 REC114Q7Z4M0 266 aa6.08□□□□□ -1.44
TRAV40-201ENST00000390467 COX4I2Q96KJ9 171 aa6.08□□□□□ -1.44
TRAV40-201ENST00000390467 KRTAP9-9Q9BYP9 154 aa6.08□□□□□ -1.44
TRAV40-201ENST00000390467 KRTAP9-4Q9BYQ2 154 aa6.08□□□□□ -1.44
TRAV40-201ENST00000390467 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.08□□□□□ -1.44
TRAV40-201ENST00000390467 CEP131Q9UPN4 1083 aa6.08□□□□□ -1.44
TRAV40-201ENST00000390467 CHURC1-FNTBB4DL54 471 aa6.07□□□□□ -1.44
TRAV40-201ENST00000390467 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.07□□□□□ -1.44
TRAV40-201ENST00000390467 ESR1P03372 595 aa6.07□□□□□ -1.44
TRAV40-201ENST00000390467 PWP1Q13610 501 aa6.07□□□□□ -1.44
TRAV40-201ENST00000390467 MPP2Q14168 576 aa6.07□□□□□ -1.44
TRAV40-201ENST00000390467 ZNF648Q5T619 568 aaPredicted RBP6.07□□□□□ -1.44
TRAV40-201ENST00000390467 FBXL19Q6PCT2 694 aa6.07□□□□□ -1.44
TRAV40-201ENST00000390467 SLFN12Q8IYM2 578 aa6.07□□□□□ -1.44
TRAV40-201ENST00000390467 PIWIL2Q8TC59 973 aaKnown RBP6.07□□□□□ -1.44
TRAV40-201ENST00000390467 DUSP15Q9H1R2 295 aaPredicted RBP6.07□□□□□ -1.44
TRAV40-201ENST00000390467 KCNQ5Q9NR82 932 aa6.07□□□□□ -1.44
TRAV40-201ENST00000390467 LRRN2O75325 713 aa6.06□□□□□ -1.44
TRAV40-201ENST00000390467 C8AP07357 584 aa6.06□□□□□ -1.44
TRAV40-201ENST00000390467 YBX3P16989 372 aaKnown RBP eCLIP6.06□□□□□ -1.44
TRAV40-201ENST00000390467 CRKP46108 304 aa6.06□□□□□ -1.44
TRAV40-201ENST00000390467 YARSP54577 528 aaKnown RBP6.06□□□□□ -1.44
TRAV40-201ENST00000390467 LDLRAD1Q5T700 205 aa6.06□□□□□ -1.44
TRAV40-201ENST00000390467 ZSWIM9Q86XI8 627 aa6.06□□□□□ -1.44
TRAV40-201ENST00000390467 DTWD2Q8NBA8 298 aa6.06□□□□□ -1.44
TRAV40-201ENST00000390467 BAHD1Q8TBE0 780 aaPredicted RBP6.06□□□□□ -1.44
TRAV40-201ENST00000390467 SLAMF8Q9P0V8 285 aa6.06□□□□□ -1.44
TRAV40-201ENST00000390467 ZNF503-AS2A6NEH8 195 aa6.05□□□□□ -1.44
TRAV40-201ENST00000390467 GAB4Q2WGN9 574 aa6.05□□□□□ -1.44
TRAV40-201ENST00000390467 RALGPS1Q5JS13 557 aa6.05□□□□□ -1.44
TRAV40-201ENST00000390467 DIEXFQ68CQ4 756 aaKnown RBP6.05□□□□□ -1.44
TRAV40-201ENST00000390467 RNF141Q8WVD5 230 aa6.05□□□□□ -1.44
TRAV40-201ENST00000390467 LRRC3Q9BY71 257 aa6.05□□□□□ -1.44
TRAV40-201ENST00000390467 ADAMTS1Q9UHI8 967 aa6.05□□□□□ -1.44
TRAV40-201ENST00000390467 DNAJC25-GNG10A0A024R161 153 aa6.04□□□□□ -1.44
TRAV40-201ENST00000390467 GREM1O60565 184 aa6.04□□□□□ -1.44
TRAV40-201ENST00000390467 SRFP11831 508 aa6.04□□□□□ -1.44
TRAV40-201ENST00000390467 EIF4A3P38919 411 aaKnown RBP6.04□□□□□ -1.44
TRAV40-201ENST00000390467 KCNMB1Q16558 191 aa6.04□□□□□ -1.44
TRAV40-201ENST00000390467 ZNF326Q5BKZ1 582 aaKnown RBP6.04□□□□□ -1.44
TRAV40-201ENST00000390467 TMEM40Q8WWA1 233 aa6.04□□□□□ -1.44
TRAV40-201ENST00000390467 LIN37Q96GY3 246 aaPredicted RBP6.04□□□□□ -1.44
TRAV40-201ENST00000390467 ALPK1Q96QP1 1244 aa6.04□□□□□ -1.44
TRAV40-201ENST00000390467 BRMS1Q9HCU9 246 aa6.04□□□□□ -1.44
TRAV40-201ENST00000390467 GGT7Q9UJ14 662 aa6.04□□□□□ -1.44
TRAV40-201ENST00000390467 ZNF16P17020 682 aaPredicted RBP6.03□□□□□ -1.44
TRAV40-201ENST00000390467 TPP2P29144 1249 aaPredicted RBP6.03□□□□□ -1.44
TRAV40-201ENST00000390467 ITGAEP38570 1179 aa6.03□□□□□ -1.44
TRAV40-201ENST00000390467 GDNFP39905 211 aa6.03□□□□□ -1.44
TRAV40-201ENST00000390467 TMPRSS7Q7RTY8 843 aa6.03□□□□□ -1.44
TRAV40-201ENST00000390467 CREG2Q8IUH2 290 aa6.03□□□□□ -1.44
TRAV40-201ENST00000390467 KREMEN1Q96MU8 473 aa6.03□□□□□ -1.44
TRAV40-201ENST00000390467 KIF2CQ99661 725 aa6.03□□□□□ -1.44
TRAV40-201ENST00000390467 GPR62Q9BZJ7 368 aa6.03□□□□□ -1.44
TRAV40-201ENST00000390467 SUPT16HQ9Y5B9 1047 aaKnown RBP6.03□□□□□ -1.44
TRAV40-201ENST00000390467 SHISA3A0PJX4 238 aa6.02□□□□□ -1.45
TRAV40-201ENST00000390467 AFMP43652 599 aa6.02□□□□□ -1.45
TRAV40-201ENST00000390467 TNNI2P48788 182 aa6.02□□□□□ -1.45
TRAV40-201ENST00000390467 ERVFC1P60507 584 aa6.02□□□□□ -1.45
TRAV40-201ENST00000390467 ZNF124Q15973 351 aa6.02□□□□□ -1.45
TRAV40-201ENST00000390467 CWF19L2Q2TBE0 894 aaKnown RBP6.02□□□□□ -1.45
TRAV40-201ENST00000390467 TMCO4Q5TGY1 634 aa6.02□□□□□ -1.45
TRAV40-201ENST00000390467 HS2ST1Q7LGA3 356 aa6.02□□□□□ -1.45
TRAV40-201ENST00000390467 PHACTR4Q8IZ21 702 aa6.02□□□□□ -1.45
TRAV40-201ENST00000390467 ZNF296Q8WUU4 475 aaPredicted RBP6.02□□□□□ -1.45
TRAV40-201ENST00000390467 KIRREL1Q96J84 757 aa6.02□□□□□ -1.45
TRAV40-201ENST00000390467 CCDC74BQ96LY2 380 aa6.02□□□□□ -1.45
TRAV40-201ENST00000390467 UBP1Q9NZI7 540 aa6.02□□□□□ -1.45
TRAV40-201ENST00000390467 PCDHB14Q9Y5E9 798 aa6.02□□□□□ -1.45
TRAV40-201ENST00000390467 SLC22A31A6NKX4 558 aa6.01□□□□□ -1.45
TRAV40-201ENST00000390467 UBOX5O94941 541 aa6.01□□□□□ -1.45
TRAV40-201ENST00000390467 POLR2BP30876 1174 aaKnown RBP6.01□□□□□ -1.45
TRAV40-201ENST00000390467 JAG1P78504 1218 aa6.01□□□□□ -1.45
TRAV40-201ENST00000390467 MESP2Q0VG99 397 aa6.01□□□□□ -1.45
TRAV40-201ENST00000390467 ARSHQ5FYA8 562 aa6.01□□□□□ -1.45
TRAV40-201ENST00000390467 OVOS1Q6IE37 1185 aa6.01□□□□□ -1.45
TRAV40-201ENST00000390467 TTC6Q86TZ1 520 aa6.01□□□□□ -1.45
TRAV40-201ENST00000390467 TSPYL5Q86VY4 417 aaPredicted RBP6.01□□□□□ -1.45
TRAV40-201ENST00000390467 ADAMTS10Q9H324 1103 aa6.01□□□□□ -1.45
TRAV40-201ENST00000390467 DUSP13Q9UII6 198 aa6.01□□□□□ -1.45
TRAV40-201ENST00000390467 TMEM59LQ9UK28 342 aa6.01□□□□□ -1.45
TRAV40-201ENST00000390467 PCDHA11Q9Y5I1 949 aa6.01□□□□□ -1.45
TRAV40-201ENST00000390467 LRRC10BA6NIK2 292 aa6□□□□□ -1.45
TRAV40-201ENST00000390467 ATE1O95260 518 aa6□□□□□ -1.45
TRAV40-201ENST00000390467 GLI1P08151 1106 aa6□□□□□ -1.45
TRAV40-201ENST00000390467 EGR3Q06889 387 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms