RNA–Protein interactions for RNA: ENST00000381272.5

SMC6-202, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 5

Gene SMC6, Length 1,803 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-202ENST00000381272 PPM1JQ5JR12 505 aa4.93□□□□□ -1.62
SMC6-202ENST00000381272 TTBK2Q6IQ55 1244 aa4.93□□□□□ -1.62
SMC6-202ENST00000381272 ISL2Q96A47 359 aa4.93□□□□□ -1.62
SMC6-202ENST00000381272 ANGEL1Q9UNK9 670 aaKnown RBP4.93□□□□□ -1.62
SMC6-202ENST00000381272 CSADQ9Y600 493 aa4.93□□□□□ -1.62
SMC6-202ENST00000381272 E9PCH4 1651 aa4.92□□□□□ -1.62
SMC6-202ENST00000381272 TRPM1Q7Z4N2 1603 aa4.92□□□□□ -1.62
SMC6-202ENST00000381272 MYO5CQ9NQX4 1742 aa4.92□□□□□ -1.62
SMC6-202ENST00000381272 MYBBP1AQ9BQG0 1328 aaKnown RBP4.92□□□□□ -1.62
SMC6-202ENST00000381272 ERCC6L2Q5T890 1561 aa4.92□□□□□ -1.62
SMC6-202ENST00000381272 CCDC144AA2RUR9 1427 aa4.92□□□□□ -1.62
SMC6-202ENST00000381272 DCDC2CA8MYV0 355 aa4.92□□□□□ -1.62
SMC6-202ENST00000381272 FANCGO15287 622 aa4.92□□□□□ -1.62
SMC6-202ENST00000381272 FAM87AP0C7U9 286 aa4.92□□□□□ -1.62
SMC6-202ENST00000381272 LMNB1P20700 586 aa4.92□□□□□ -1.62
SMC6-202ENST00000381272 RPS26P62854 115 aaKnown RBP4.92□□□□□ -1.62
SMC6-202ENST00000381272 TMC4Q7Z404 712 aa4.92□□□□□ -1.62
SMC6-202ENST00000381272 FBXO33Q7Z6M2 555 aa4.92□□□□□ -1.62
SMC6-202ENST00000381272 C12orf40Q86WS4 652 aa4.92□□□□□ -1.62
SMC6-202ENST00000381272 ELMO3Q96BJ8 720 aa4.92□□□□□ -1.62
SMC6-202ENST00000381272 BSDC1Q9NW68 430 aaPredicted RBP4.92□□□□□ -1.62
SMC6-202ENST00000381272 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP4.92□□□□□ -1.62
SMC6-202ENST00000381272 PLA2R1Q13018 1463 aa4.92□□□□□ -1.62
SMC6-202ENST00000381272 PRAG1Q86YV5 1406 aa4.91□□□□□ -1.62
SMC6-202ENST00000381272 KRTAP9-6A0A140TA67 174 aa4.91□□□□□ -1.62
SMC6-202ENST00000381272 ADAMTS4O75173 837 aa4.91□□□□□ -1.62
SMC6-202ENST00000381272 RING1Q06587 406 aa4.91□□□□□ -1.62
SMC6-202ENST00000381272 RALBP1Q15311 655 aa4.91□□□□□ -1.62
SMC6-202ENST00000381272 CC2D1BQ5T0F9 858 aaKnown RBP4.91□□□□□ -1.62
SMC6-202ENST00000381272 CCDC136Q96JN2 1154 aa4.91□□□□□ -1.62
SMC6-202ENST00000381272 ZC3H7BQ9UGR2 993 aaKnown RBP4.91□□□□□ -1.62
SMC6-202ENST00000381272 PLEKHH2Q8IVE3 1493 aa4.91□□□□□ -1.62
SMC6-202ENST00000381272 RNF123Q5XPI4 1314 aa4.91□□□□□ -1.62
SMC6-202ENST00000381272 PRNPP04156 253 aa4.9□□□□□ -1.62
SMC6-202ENST00000381272 TAF1CQ15572 869 aaPredicted RBP4.9□□□□□ -1.62
SMC6-202ENST00000381272 ZBTB37Q5TC79 503 aa4.9□□□□□ -1.62
SMC6-202ENST00000381272 MEI1Q5TIA1 1274 aa4.9□□□□□ -1.62
SMC6-202ENST00000381272 CDC37L1Q7L3B6 337 aa4.9□□□□□ -1.62
SMC6-202ENST00000381272 HDXQ7Z353 690 aa4.9□□□□□ -1.62
SMC6-202ENST00000381272 VSIG10LQ86VR7 867 aa4.9□□□□□ -1.62
SMC6-202ENST00000381272 KCT2Q8NC54 265 aa4.9□□□□□ -1.62
SMC6-202ENST00000381272 DUSP23Q9BVJ7 150 aa4.9□□□□□ -1.62
SMC6-202ENST00000381272 CCDC39Q9UFE4 941 aa4.9□□□□□ -1.62
SMC6-202ENST00000381272 OAS3Q9Y6K5 1087 aaKnown RBP4.9□□□□□ -1.62
SMC6-202ENST00000381272 BRD4O60885 1362 aaPredicted RBP4.9□□□□□ -1.62
SMC6-202ENST00000381272 LRPPRCP42704 1394 aaKnown RBP4.9□□□□□ -1.62
SMC6-202ENST00000381272 A2MP01023 1474 aa4.9□□□□□ -1.62
SMC6-202ENST00000381272 UNC13BO14795 1591 aa4.9□□□□□ -1.62
SMC6-202ENST00000381272 MAST1Q9Y2H9 1570 aa4.9□□□□□ -1.63
SMC6-202ENST00000381272 DISP3Q9P2K9 1392 aa4.9□□□□□ -1.63
SMC6-202ENST00000381272 RLBP1P12271 317 aa4.9□□□□□ -1.63
SMC6-202ENST00000381272 NTF4P34130 210 aa4.9□□□□□ -1.63
SMC6-202ENST00000381272 PTPN11Q06124 597 aaPredicted RBP4.9□□□□□ -1.63
SMC6-202ENST00000381272 GAL3ST3Q96A11 431 aa4.9□□□□□ -1.63
SMC6-202ENST00000381272 FAM161BQ96MY7 647 aa4.9□□□□□ -1.63
SMC6-202ENST00000381272 KTN1Q86UP2 1357 aaKnown RBP4.89□□□□□ -1.63
SMC6-202ENST00000381272 SORBS3O60504 671 aa4.89□□□□□ -1.63
SMC6-202ENST00000381272 LIG3P49916 1009 aa4.89□□□□□ -1.63
SMC6-202ENST00000381272 ST13P50502 369 aaKnown RBP4.89□□□□□ -1.63
SMC6-202ENST00000381272 INPP5AQ14642 412 aa4.89□□□□□ -1.63
SMC6-202ENST00000381272 MAP3K11Q16584 847 aa4.89□□□□□ -1.63
SMC6-202ENST00000381272 LRFN4Q6PJG9 635 aa4.89□□□□□ -1.63
SMC6-202ENST00000381272 AGMOQ6ZNB7 445 aa4.89□□□□□ -1.63
SMC6-202ENST00000381272 PLPPR2Q96GM1 343 aa4.89□□□□□ -1.63
SMC6-202ENST00000381272 FBXL18Q96ME1 805 aa4.89□□□□□ -1.63
SMC6-202ENST00000381272 NOC4LQ9BVI4 516 aaKnown RBP4.89□□□□□ -1.63
SMC6-202ENST00000381272 PANK3Q9H999 370 aa4.89□□□□□ -1.63
SMC6-202ENST00000381272 SNCAIPQ9Y6H5 919 aa4.89□□□□□ -1.63
SMC6-202ENST00000381272 IQGAP3Q86VI3 1631 aa4.89□□□□□ -1.63
SMC6-202ENST00000381272 USP31Q70CQ4 1352 aa4.88□□□□□ -1.63
SMC6-202ENST00000381272 PARD3Q8TEW0 1356 aa4.88□□□□□ -1.63
SMC6-202ENST00000381272 SHROOM2Q13796 1616 aa4.88□□□□□ -1.63
SMC6-202ENST00000381272 PRAMEF27A3QJZ7 478 aa4.88□□□□□ -1.63
SMC6-202ENST00000381272 LEFTY1O75610 366 aa4.88□□□□□ -1.63
SMC6-202ENST00000381272 IRAK1P51617 712 aa4.88□□□□□ -1.63
SMC6-202ENST00000381272 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.88□□□□□ -1.63
SMC6-202ENST00000381272 CYFIP1Q7L576 1253 aa4.88□□□□□ -1.63
SMC6-202ENST00000381272 TOP6BLQ8N6T0 577 aa4.88□□□□□ -1.63
SMC6-202ENST00000381272 EXOC6Q8TAG9 804 aa4.88□□□□□ -1.63
SMC6-202ENST00000381272 ZNF507Q8TCN5 953 aa4.88□□□□□ -1.63
SMC6-202ENST00000381272 CRELD1Q96HD1 420 aa4.88□□□□□ -1.63
SMC6-202ENST00000381272 TESK2Q96S53 571 aa4.88□□□□□ -1.63
SMC6-202ENST00000381272 MIR1-1HGQ9H1L0 117 aa4.88□□□□□ -1.63
SMC6-202ENST00000381272 ABCC2Q92887 1545 aa4.88□□□□□ -1.63
SMC6-202ENST00000381272 ERBINQ96RT1 1412 aa4.88□□□□□ -1.63
SMC6-202ENST00000381272 PLXNC1O60486 1568 aa4.88□□□□□ -1.63
SMC6-202ENST00000381272 ZCCHC11Q5TAX3 1644 aaKnown RBP4.88□□□□□ -1.63
SMC6-202ENST00000381272 PRDM15P57071 1507 aaPredicted RBP4.88□□□□□ -1.63
SMC6-202ENST00000381272 DUOX2Q9NRD8 1548 aa4.88□□□□□ -1.63
SMC6-202ENST00000381272 CTSHP09668 335 aa4.88□□□□□ -1.63
SMC6-202ENST00000381272 RRP1P56182 461 aaKnown RBP4.88□□□□□ -1.63
SMC6-202ENST00000381272 TAGLNQ01995 201 aaKnown RBP4.88□□□□□ -1.63
SMC6-202ENST00000381272 SEPT6Q14141 434 aa4.88□□□□□ -1.63
SMC6-202ENST00000381272 WIPI1Q5MNZ9 446 aaPredicted RBP4.88□□□□□ -1.63
SMC6-202ENST00000381272 ARHGAP27Q6ZUM4 889 aa4.88□□□□□ -1.63
SMC6-202ENST00000381272 TP53INP2Q8IXH6 220 aa4.88□□□□□ -1.63
SMC6-202ENST00000381272 FAM181AQ8N9Y4 354 aa4.88□□□□□ -1.63
SMC6-202ENST00000381272 MKNK2Q9HBH9 465 aa4.88□□□□□ -1.63
SMC6-202ENST00000381272 PRDM10Q9NQV6 1147 aa4.88□□□□□ -1.63
SMC6-202ENST00000381272 VTI1BQ9UEU0 232 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms