RNA–Protein interactions for RNA: ENST00000381254.6

GEN1-202, Transcript of GEN1, Holliday junction 5' flap endonuclease, humanhuman

APPRIS P1 TSL 5 BASIC

Gene GEN1, Length 6,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GEN1-202ENST00000381254 CHAMP1Q96JM3 812 aa6.26□□□□□ -1.41
GEN1-202ENST00000381254 NAP1L3Q99457 506 aaPredicted RBP6.26□□□□□ -1.41
GEN1-202ENST00000381254 TANGO6Q9C0B7 1094 aa6.26□□□□□ -1.41
GEN1-202ENST00000381254 MAGEF1Q9HAY2 307 aa6.26□□□□□ -1.41
GEN1-202ENST00000381254 ARFGAP3Q9NP61 516 aa6.26□□□□□ -1.41
GEN1-202ENST00000381254 RBM28Q9NW13 759 aaKnown RBP6.26□□□□□ -1.41
GEN1-202ENST00000381254 PSMA7O14818 248 aa6.26□□□□□ -1.41
GEN1-202ENST00000381254 ADCY3O60266 1144 aa6.26□□□□□ -1.41
GEN1-202ENST00000381254 PSMC4P43686 418 aa6.26□□□□□ -1.41
GEN1-202ENST00000381254 CFAP58Q5T655 872 aa6.26□□□□□ -1.41
GEN1-202ENST00000381254 RNF180Q86T96 592 aa6.26□□□□□ -1.41
GEN1-202ENST00000381254 TMX3Q96JJ7 454 aa6.26□□□□□ -1.41
GEN1-202ENST00000381254 C1QTNF1Q9BXJ1 281 aa6.26□□□□□ -1.41
GEN1-202ENST00000381254 HEG1Q9ULI3 1381 aa6.26□□□□□ -1.41
GEN1-202ENST00000381254 SNW1Q13573 536 aaKnown RBP6.25□□□□□ -1.41
GEN1-202ENST00000381254 TMEM132AQ24JP5 1023 aa6.25□□□□□ -1.41
GEN1-202ENST00000381254 KIAA1328Q86T90 577 aa6.25□□□□□ -1.41
GEN1-202ENST00000381254 SMAP1Q8IYB5 467 aaPredicted RBP6.25□□□□□ -1.41
GEN1-202ENST00000381254 JAKMIP2Q96AA8 810 aa6.25□□□□□ -1.41
GEN1-202ENST00000381254 NUP58Q9BVL2 599 aa6.25□□□□□ -1.41
GEN1-202ENST00000381254 CHL1O00533 1208 aa6.25□□□□□ -1.41
GEN1-202ENST00000381254 ZBTB48P10074 688 aaPredicted RBP6.25□□□□□ -1.41
GEN1-202ENST00000381254 MCMDC2Q4G0Z9 681 aa6.25□□□□□ -1.41
GEN1-202ENST00000381254 PPP1R2P3Q6NXS1 205 aa6.25□□□□□ -1.41
GEN1-202ENST00000381254 USH1CQ9Y6N9 552 aa6.25□□□□□ -1.41
GEN1-202ENST00000381254 RFX7Q2KHR2 1363 aa6.25□□□□□ -1.41
GEN1-202ENST00000381254 KRT86O43790 486 aa6.25□□□□□ -1.41
GEN1-202ENST00000381254 ZBED4O75132 1171 aa6.25□□□□□ -1.41
GEN1-202ENST00000381254 PPP2R3AQ06190 1150 aa6.25□□□□□ -1.41
GEN1-202ENST00000381254 NKX1-1Q15270 411 aaPredicted RBP6.25□□□□□ -1.41
GEN1-202ENST00000381254 MTHFSDQ2M296 383 aaKnown RBP6.25□□□□□ -1.41
GEN1-202ENST00000381254 CNNM3Q8NE01 707 aa6.25□□□□□ -1.41
GEN1-202ENST00000381254 TSGA10Q9BZW7 698 aa6.25□□□□□ -1.41
GEN1-202ENST00000381254 SYCE3A1L190 88 aa6.25□□□□□ -1.41
GEN1-202ENST00000381254 ARID4AP29374 1257 aaPredicted RBP6.25□□□□□ -1.41
GEN1-202ENST00000381254 CASQ1P31415 396 aa6.25□□□□□ -1.41
GEN1-202ENST00000381254 GBP1P32455 592 aa6.25□□□□□ -1.41
GEN1-202ENST00000381254 COPB2P35606 906 aa6.25□□□□□ -1.41
GEN1-202ENST00000381254 GCLCP48506 637 aaPredicted RBP6.25□□□□□ -1.41
GEN1-202ENST00000381254 MFSD14BQ5SR56 506 aa6.25□□□□□ -1.41
GEN1-202ENST00000381254 SUGP1Q8IWZ8 645 aaKnown RBP6.25□□□□□ -1.41
GEN1-202ENST00000381254 PROM2Q8N271 834 aa6.25□□□□□ -1.41
GEN1-202ENST00000381254 MLKLQ8NB16 471 aa6.25□□□□□ -1.41
GEN1-202ENST00000381254 L3MBTL3Q96JM7 780 aaPredicted RBP6.25□□□□□ -1.41
GEN1-202ENST00000381254 E9PCH4 1651 aa6.25□□□□□ -1.41
GEN1-202ENST00000381254 GLI3P10071 1580 aa6.25□□□□□ -1.41
GEN1-202ENST00000381254 CTAGE15A4D2H0 777 aa6.25□□□□□ -1.41
GEN1-202ENST00000381254 M0QZ92 97 aa6.25□□□□□ -1.41
GEN1-202ENST00000381254 CTAGE8P0CG41 777 aa6.25□□□□□ -1.41
GEN1-202ENST00000381254 CXCL9Q07325 125 aa6.25□□□□□ -1.41
GEN1-202ENST00000381254 RAB30Q15771 203 aa6.25□□□□□ -1.41
GEN1-202ENST00000381254 DHX32Q7L7V1 743 aaKnown RBP6.25□□□□□ -1.41
GEN1-202ENST00000381254 CTAGE6Q86UF2 777 aa6.25□□□□□ -1.41
GEN1-202ENST00000381254 CTAGE4Q8IX94 777 aa6.25□□□□□ -1.41
GEN1-202ENST00000381254 TRMT2AQ8IZ69 625 aaKnown RBP6.25□□□□□ -1.41
GEN1-202ENST00000381254 MFSD1Q9H3U5 465 aa6.25□□□□□ -1.41
GEN1-202ENST00000381254 OGFRQ9NZT2 677 aa6.25□□□□□ -1.41
GEN1-202ENST00000381254 RPAP1Q9BWH6 1393 aaPredicted RBP6.24□□□□□ -1.41
GEN1-202ENST00000381254 RGL2O15211 777 aa6.24□□□□□ -1.41
GEN1-202ENST00000381254 TACC1O75410 805 aa6.24□□□□□ -1.41
GEN1-202ENST00000381254 CCDC175P0C221 793 aa6.24□□□□□ -1.41
GEN1-202ENST00000381254 NOLC1Q14978 699 aaKnown RBP eCLIP6.24□□□□□ -1.41
GEN1-202ENST00000381254 RPUSD2Q8IZ73 545 aaKnown RBP6.24□□□□□ -1.41
GEN1-202ENST00000381254 FSIP1Q8NA03 581 aa6.24□□□□□ -1.41
GEN1-202ENST00000381254 PLCD4Q9BRC7 762 aa6.24□□□□□ -1.41
GEN1-202ENST00000381254 ADM5C9JUS6 153 aa6.24□□□□□ -1.41
GEN1-202ENST00000381254 FAM160A1Q05DH4 1040 aa6.24□□□□□ -1.41
GEN1-202ENST00000381254 FOXD4L5Q5VV16 416 aaPredicted RBP6.24□□□□□ -1.41
GEN1-202ENST00000381254 FOXD4L4Q8WXT5 416 aaPredicted RBP6.24□□□□□ -1.41
GEN1-202ENST00000381254 LRRC45Q96CN5 670 aa6.24□□□□□ -1.41
GEN1-202ENST00000381254 ORC3Q9UBD5 711 aaPredicted RBP6.24□□□□□ -1.41
GEN1-202ENST00000381254 POLKQ9UBT6 870 aa6.24□□□□□ -1.41
GEN1-202ENST00000381254 DENND2AQ9ULE3 1009 aa6.24□□□□□ -1.41
GEN1-202ENST00000381254 GOLGA8AA7E2F4 631 aa6.24□□□□□ -1.41
GEN1-202ENST00000381254 GOLGA8BA8MQT2 603 aa6.24□□□□□ -1.41
GEN1-202ENST00000381254 UBA7P41226 1012 aa6.24□□□□□ -1.41
GEN1-202ENST00000381254 SEPT7Q16181 437 aaKnown RBP6.24□□□□□ -1.41
GEN1-202ENST00000381254 RUFY4Q6ZNE9 571 aa6.24□□□□□ -1.41
GEN1-202ENST00000381254 ERO1BQ86YB8 467 aa6.24□□□□□ -1.41
GEN1-202ENST00000381254 ZNF296Q8WUU4 475 aaPredicted RBP6.24□□□□□ -1.41
GEN1-202ENST00000381254 CUL5Q93034 780 aa6.24□□□□□ -1.41
GEN1-202ENST00000381254 DKC1O60832 514 aaKnown RBP eCLIP6.24□□□□□ -1.41
GEN1-202ENST00000381254 SASH1O94885 1247 aa6.24□□□□□ -1.41
GEN1-202ENST00000381254 PPP4R3AQ6IN85 833 aa6.24□□□□□ -1.41
GEN1-202ENST00000381254 GALNT17Q6IS24 598 aa6.24□□□□□ -1.41
GEN1-202ENST00000381254 CWC27Q6UX04 472 aaKnown RBP6.24□□□□□ -1.41
GEN1-202ENST00000381254 TTC6Q86TZ1 520 aa6.24□□□□□ -1.41
GEN1-202ENST00000381254 CCDC50Q8IVM0 306 aa6.24□□□□□ -1.41
GEN1-202ENST00000381254 SELENOOQ9BVL4 669 aa6.24□□□□□ -1.41
GEN1-202ENST00000381254 C11orf49Q9H6J7 331 aa6.24□□□□□ -1.41
GEN1-202ENST00000381254 RASAL2Q9UJF2 1139 aa6.24□□□□□ -1.41
GEN1-202ENST00000381254 ZNF500O60304 480 aaPredicted RBP6.24□□□□□ -1.41
GEN1-202ENST00000381254 MYL1P05976 194 aa6.24□□□□□ -1.41
GEN1-202ENST00000381254 GNA11P29992 359 aa6.24□□□□□ -1.41
GEN1-202ENST00000381254 PLCD1P51178 756 aa6.24□□□□□ -1.41
GEN1-202ENST00000381254 SMIM5Q71RC9 77 aa6.24□□□□□ -1.41
GEN1-202ENST00000381254 DEFB123Q8N688 67 aa6.24□□□□□ -1.41
GEN1-202ENST00000381254 SOCS4Q8WXH5 440 aa6.24□□□□□ -1.41
GEN1-202ENST00000381254 PPP1R9BQ96SB3 815 aa6.24□□□□□ -1.41
GEN1-202ENST00000381254 CRNKL1Q9BZJ0 848 aaKnown RBP6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms