RNA–Protein interactions for RNA: ENST00000380747.5

HMGN1-202, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 709 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-202ENST00000380747 DDRGK1Q96HY6 314 aa11.1□□□□□ -0.63
HMGN1-202ENST00000380747 MCM9Q9NXL9 1143 aa11.1□□□□□ -0.63
HMGN1-202ENST00000380747 HERC5Q9UII4 1024 aaKnown RBP11.1□□□□□ -0.63
HMGN1-202ENST00000380747 SLC4A4Q9Y6R1 1079 aa11.1□□□□□ -0.63
HMGN1-202ENST00000380747 CTNND1O60716 968 aaKnown RBP11.09□□□□□ -0.63
HMGN1-202ENST00000380747 GTF2A2P52657 109 aa11.09□□□□□ -0.63
HMGN1-202ENST00000380747 PPATQ06203 517 aa11.09□□□□□ -0.63
HMGN1-202ENST00000380747 PPIL2Q13356 520 aa11.09□□□□□ -0.63
HMGN1-202ENST00000380747 OSBP2Q969R2 916 aa11.09□□□□□ -0.63
HMGN1-202ENST00000380747 RILPL2Q969X0 211 aa11.09□□□□□ -0.63
HMGN1-202ENST00000380747 EFCC1Q9HA90 598 aa11.09□□□□□ -0.63
HMGN1-202ENST00000380747 CCL15-CCL14A0A0B4J2E2 113 aa11.08□□□□□ -0.64
HMGN1-202ENST00000380747 M0R2C6 588 aa11.08□□□□□ -0.64
HMGN1-202ENST00000380747 IRF6O14896 467 aa11.08□□□□□ -0.64
HMGN1-202ENST00000380747 CYP2D6P10635 497 aa11.08□□□□□ -0.64
HMGN1-202ENST00000380747 CAP2P40123 477 aa11.08□□□□□ -0.64
HMGN1-202ENST00000380747 PLCD1P51178 756 aa11.08□□□□□ -0.64
HMGN1-202ENST00000380747 SP3Q02447 781 aa11.08□□□□□ -0.64
HMGN1-202ENST00000380747 CRHR2Q13324 411 aa11.08□□□□□ -0.64
HMGN1-202ENST00000380747 SNAPC2Q13487 334 aa11.08□□□□□ -0.64
HMGN1-202ENST00000380747 RRP1BQ14684 758 aaKnown RBP11.08□□□□□ -0.64
HMGN1-202ENST00000380747 CCL15Q16663 113 aa11.08□□□□□ -0.64
HMGN1-202ENST00000380747 CCDC84Q86UT8 332 aaPredicted RBP11.08□□□□□ -0.64
HMGN1-202ENST00000380747 BRI3BPQ8WY22 251 aa11.08□□□□□ -0.64
HMGN1-202ENST00000380747 ZNF333Q96JL9 665 aa11.08□□□□□ -0.64
HMGN1-202ENST00000380747 STRBPQ96SI9 672 aaKnown RBP11.08□□□□□ -0.64
HMGN1-202ENST00000380747 DNAJC18Q9H819 358 aa11.08□□□□□ -0.64
HMGN1-202ENST00000380747 DCP1AQ9NPI6 582 aaPredicted RBP11.08□□□□□ -0.64
HMGN1-202ENST00000380747 ATP8A2Q9NTI2 1148 aa11.08□□□□□ -0.64
HMGN1-202ENST00000380747 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.08□□□□□ -0.64
HMGN1-202ENST00000380747 SERPINB13Q9UIV8 391 aa11.08□□□□□ -0.64
HMGN1-202ENST00000380747 ZHX2Q9Y6X8 837 aa11.08□□□□□ -0.64
HMGN1-202ENST00000380747 LAMA3Q16787 3333 aa11.07□□□□□ -0.64
HMGN1-202ENST00000380747 GPAA1O43292 621 aa11.07□□□□□ -0.64
HMGN1-202ENST00000380747 GDF11O95390 407 aa11.07□□□□□ -0.64
HMGN1-202ENST00000380747 CETPP11597 493 aa11.07□□□□□ -0.64
HMGN1-202ENST00000380747 PTPRAP18433 802 aa11.07□□□□□ -0.64
HMGN1-202ENST00000380747 ARHGEF6Q15052 776 aa11.07□□□□□ -0.64
HMGN1-202ENST00000380747 SMYD5Q6GMV2 418 aa11.07□□□□□ -0.64
HMGN1-202ENST00000380747 AMOTL1Q8IY63 956 aa11.07□□□□□ -0.64
HMGN1-202ENST00000380747 CD99L2Q8TCZ2 262 aa11.07□□□□□ -0.64
HMGN1-202ENST00000380747 SEC62Q99442 399 aaKnown RBP11.07□□□□□ -0.64
HMGN1-202ENST00000380747 OSBPL3Q9H4L5 887 aa11.07□□□□□ -0.64
HMGN1-202ENST00000380747 CDK5RAP2Q96SN8 1893 aa11.06□□□□□ -0.64
HMGN1-202ENST00000380747 CYP2D7A0A087X1C5 515 aa11.06□□□□□ -0.64
HMGN1-202ENST00000380747 USP17L12C9JPN9 530 aa11.06□□□□□ -0.64
HMGN1-202ENST00000380747 USP17L21D6R901 530 aa11.06□□□□□ -0.64
HMGN1-202ENST00000380747 APPP05067 770 aa11.06□□□□□ -0.64
HMGN1-202ENST00000380747 GNAT2P19087 354 aa11.06□□□□□ -0.64
HMGN1-202ENST00000380747 EN2P19622 333 aaPredicted RBP11.06□□□□□ -0.64
HMGN1-202ENST00000380747 MLLT3P42568 568 aaPredicted RBP11.06□□□□□ -0.64
HMGN1-202ENST00000380747 ZMYM1Q5SVZ6 1142 aa11.06□□□□□ -0.64
HMGN1-202ENST00000380747 METTL16Q86W50 562 aaKnown RBP11.06□□□□□ -0.64
HMGN1-202ENST00000380747 PTPN18Q99952 460 aa11.06□□□□□ -0.64
HMGN1-202ENST00000380747 EHD4Q9H223 541 aa11.06□□□□□ -0.64
HMGN1-202ENST00000380747 COL6A3P12111 3177 aa11.06□□□□□ -0.64
HMGN1-202ENST00000380747 FOCADQ5VW36 1801 aa11.06□□□□□ -0.64
HMGN1-202ENST00000380747 CUL9Q8IWT3 2517 aa11.06□□□□□ -0.64
HMGN1-202ENST00000380747 MYH7P12883 1935 aa11.05□□□□□ -0.64
HMGN1-202ENST00000380747 TRIM75PA6NK02 468 aa11.05□□□□□ -0.64
HMGN1-202ENST00000380747 USP17L5A8MUK1 530 aa11.05□□□□□ -0.64
HMGN1-202ENST00000380747 CXCL11O14625 94 aa11.05□□□□□ -0.64
HMGN1-202ENST00000380747 TDO2P48775 406 aa11.05□□□□□ -0.64
HMGN1-202ENST00000380747 JAG1P78504 1218 aa11.05□□□□□ -0.64
HMGN1-202ENST00000380747 GADL1Q6ZQY3 521 aa11.05□□□□□ -0.64
HMGN1-202ENST00000380747 CCDC129Q6ZRS4 1044 aa11.05□□□□□ -0.64
HMGN1-202ENST00000380747 CENPQQ7L2Z9 268 aaPredicted RBP11.05□□□□□ -0.64
HMGN1-202ENST00000380747 NBPF11Q86T75 865 aa11.05□□□□□ -0.64
HMGN1-202ENST00000380747 NAV1Q8NEY1 1877 aa11.05□□□□□ -0.64
HMGN1-202ENST00000380747 DYNLL2Q96FJ2 89 aa11.05□□□□□ -0.64
HMGN1-202ENST00000380747 ARPP21Q9UBL0 812 aaPredicted RBP11.05□□□□□ -0.64
HMGN1-202ENST00000380747 ZBTB21Q9ULJ3 1066 aa11.05□□□□□ -0.64
HMGN1-202ENST00000380747 KCNH4Q9UQ05 1017 aa11.05□□□□□ -0.64
HMGN1-202ENST00000380747 AFG3L2Q9Y4W6 797 aa11.05□□□□□ -0.64
HMGN1-202ENST00000380747 SIPA1L1O43166 1804 aa11.05□□□□□ -0.64
HMGN1-202ENST00000380747 SPDYE16A6NNV3 312 aaPredicted RBP11.04□□□□□ -0.64
HMGN1-202ENST00000380747 GSG1L2A8MUP6 293 aa11.04□□□□□ -0.64
HMGN1-202ENST00000380747 MINDY4BA8MYZ0 360 aa11.04□□□□□ -0.64
HMGN1-202ENST00000380747 BTBD19C9JJ37 291 aa11.04□□□□□ -0.64
HMGN1-202ENST00000380747 GH2P01242 217 aa11.04□□□□□ -0.64
HMGN1-202ENST00000380747 ASNSP08243 561 aa11.04□□□□□ -0.64
HMGN1-202ENST00000380747 SDSP20132 328 aa11.04□□□□□ -0.64
HMGN1-202ENST00000380747 SHMT1P34896 483 aa11.04□□□□□ -0.64
HMGN1-202ENST00000380747 CAP1Q01518 475 aa11.04□□□□□ -0.64
HMGN1-202ENST00000380747 GABPAQ06546 454 aa11.04□□□□□ -0.64
HMGN1-202ENST00000380747 NMIQ13287 307 aaPredicted RBP11.04□□□□□ -0.64
HMGN1-202ENST00000380747 TAF1CQ15572 869 aaPredicted RBP11.04□□□□□ -0.64
HMGN1-202ENST00000380747 ABCB5Q2M3G0 1257 aa11.04□□□□□ -0.64
HMGN1-202ENST00000380747 SHROOM1Q2M3G4 852 aaPredicted RBP11.04□□□□□ -0.64
HMGN1-202ENST00000380747 CERKLQ49MI3 558 aaPredicted RBP11.04□□□□□ -0.64
HMGN1-202ENST00000380747 C12orf60Q5U649 245 aa11.04□□□□□ -0.64
HMGN1-202ENST00000380747 TATDN1Q6P1N9 297 aa11.04□□□□□ -0.64
HMGN1-202ENST00000380747 CTR9Q6PD62 1173 aa11.04□□□□□ -0.64
HMGN1-202ENST00000380747 STK11IPQ8N1F8 1099 aa11.04□□□□□ -0.64
HMGN1-202ENST00000380747 FAM43AQ8N2R8 423 aa11.04□□□□□ -0.64
HMGN1-202ENST00000380747 SLC44A5Q8NCS7 719 aa11.04□□□□□ -0.64
HMGN1-202ENST00000380747 CCDC136Q96JN2 1154 aa11.04□□□□□ -0.64
HMGN1-202ENST00000380747 FAM227BQ96M60 508 aa11.04□□□□□ -0.64
HMGN1-202ENST00000380747 NACAP1Q9BZK3 213 aa11.04□□□□□ -0.64
HMGN1-202ENST00000380747 AS3MTQ9HBK9 375 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms