RNA–Protein interactions for RNA: ENST00000380358.8

CHD3-203, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2 BASIC

Gene CHD3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-203ENST00000380358 GDAP1Q8TB36 358 aa13.76□□□□□ -0.21
CHD3-203ENST00000380358 V9GY48 417 aaPredicted RBP13.76□□□□□ -0.21
CHD3-203ENST00000380358 ANO4Q32M45 955 aa13.76□□□□□ -0.21
CHD3-203ENST00000380358 MMEL1Q495T6 779 aa13.76□□□□□ -0.21
CHD3-203ENST00000380358 FAM47AQ5JRC9 791 aa13.76□□□□□ -0.21
CHD3-203ENST00000380358 C8orf74Q6P047 294 aa13.76□□□□□ -0.21
CHD3-203ENST00000380358 BAG5Q9UL15 447 aa13.76□□□□□ -0.21
CHD3-203ENST00000380358 PTPRCP08575 1304 aa13.76□□□□□ -0.21
CHD3-203ENST00000380358 ACEP12821 1306 aa13.76□□□□□ -0.21
CHD3-203ENST00000380358 RNASELQ05823 741 aaKnown RBP13.76□□□□□ -0.21
CHD3-203ENST00000380358 SPAG1Q07617 926 aa13.76□□□□□ -0.21
CHD3-203ENST00000380358 LLGL1Q15334 1064 aa13.76□□□□□ -0.21
CHD3-203ENST00000380358 DOK7Q18PE1 504 aa13.76□□□□□ -0.21
CHD3-203ENST00000380358 TSGA10Q9BZW7 698 aa13.76□□□□□ -0.21
CHD3-203ENST00000380358 HAUS2Q9NVX0 235 aa13.76□□□□□ -0.21
CHD3-203ENST00000380358 PRG4Q92954 1404 aaPredicted RBP13.76□□□□□ -0.21
CHD3-203ENST00000380358 ZBBXA8MT70 800 aa13.76□□□□□ -0.21
CHD3-203ENST00000380358 WASLO00401 505 aaPredicted RBP13.76□□□□□ -0.21
CHD3-203ENST00000380358 PPIP5K2O43314 1243 aa13.76□□□□□ -0.21
CHD3-203ENST00000380358 DLATP10515 647 aaKnown RBP13.76□□□□□ -0.21
CHD3-203ENST00000380358 ATP5DP30049 168 aa13.76□□□□□ -0.21
CHD3-203ENST00000380358 ATP6V1E2Q96A05 226 aa13.76□□□□□ -0.21
CHD3-203ENST00000380358 GGA1Q9UJY5 639 aa13.76□□□□□ -0.21
CHD3-203ENST00000380358 KRT3P12035 628 aa13.75□□□□□ -0.21
CHD3-203ENST00000380358 ALAS1P13196 640 aa13.75□□□□□ -0.21
CHD3-203ENST00000380358 HABP4Q5JVS0 413 aaKnown RBP13.75□□□□□ -0.21
CHD3-203ENST00000380358 FAM180AQ6UWF9 173 aa13.75□□□□□ -0.21
CHD3-203ENST00000380358 SND1Q7KZF4 910 aaKnown RBP eCLIP13.75□□□□□ -0.21
CHD3-203ENST00000380358 NIM1KQ8IY84 436 aa13.75□□□□□ -0.21
CHD3-203ENST00000380358 FGD4Q96M96 766 aa13.75□□□□□ -0.21
CHD3-203ENST00000380358 CCDC68Q9H2F9 335 aa13.75□□□□□ -0.21
CHD3-203ENST00000380358 H7C1D1 291 aa13.75□□□□□ -0.21
CHD3-203ENST00000380358 PHEXP78562 749 aa13.75□□□□□ -0.21
CHD3-203ENST00000380358 TTC6Q86TZ1 520 aa13.75□□□□□ -0.21
CHD3-203ENST00000380358 CAMSAP2Q08AD1 1489 aa13.75□□□□□ -0.21
CHD3-203ENST00000380358 SCNN1DP51172 638 aa13.75□□□□□ -0.21
CHD3-203ENST00000380358 TIMM10P62072 90 aa13.75□□□□□ -0.21
CHD3-203ENST00000380358 BICC1Q9H694 974 aaKnown RBP13.75□□□□□ -0.21
CHD3-203ENST00000380358 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.75□□□□□ -0.21
CHD3-203ENST00000380358 ANAPC5Q9UJX4 755 aa13.75□□□□□ -0.21
CHD3-203ENST00000380358 LRFN2Q9ULH4 789 aa13.75□□□□□ -0.21
CHD3-203ENST00000380358 HACE1Q8IYU2 909 aa13.75□□□□□ -0.21
CHD3-203ENST00000380358 SNX29Q8TEQ0 813 aa13.75□□□□□ -0.21
CHD3-203ENST00000380358 SLITRK6Q9H5Y7 841 aa13.75□□□□□ -0.21
CHD3-203ENST00000380358 ABT1Q9ULW3 272 aaKnown RBP13.75□□□□□ -0.21
CHD3-203ENST00000380358 FGD6Q6ZV73 1430 aa13.75□□□□□ -0.21
CHD3-203ENST00000380358 GUCY2FP51841 1108 aa13.75□□□□□ -0.21
CHD3-203ENST00000380358 TYRO3Q06418 890 aa13.75□□□□□ -0.21
CHD3-203ENST00000380358 ADCY1Q08828 1119 aa13.75□□□□□ -0.21
CHD3-203ENST00000380358 DEPTORQ8TB45 409 aa13.75□□□□□ -0.21
CHD3-203ENST00000380358 EXOC7Q9UPT5 735 aa13.75□□□□□ -0.21
CHD3-203ENST00000380358 MAD1L1Q9Y6D9 718 aa13.75□□□□□ -0.21
CHD3-203ENST00000380358 RNF113AO15541 343 aaKnown RBP13.75□□□□□ -0.21
CHD3-203ENST00000380358 COG7P83436 770 aa13.75□□□□□ -0.21
CHD3-203ENST00000380358 NCOA5Q9HCD5 579 aaKnown RBP13.75□□□□□ -0.21
CHD3-203ENST00000380358 NR1H4Q96RI1 486 aaPredicted RBP13.74□□□□□ -0.21
CHD3-203ENST00000380358 NLRC4Q9NPP4 1024 aa13.74□□□□□ -0.21
CHD3-203ENST00000380358 AKR1B15C9JRZ8 316 aaPredicted RBP13.74□□□□□ -0.21
CHD3-203ENST00000380358 PPP2R3AQ06190 1150 aa13.74□□□□□ -0.21
CHD3-203ENST00000380358 OTUD7BQ6GQQ9 843 aa13.74□□□□□ -0.21
CHD3-203ENST00000380358 RUFY3Q7L099 469 aa13.74□□□□□ -0.21
CHD3-203ENST00000380358 PHLDB2Q86SQ0 1253 aa13.74□□□□□ -0.21
CHD3-203ENST00000380358 ALDH1L2Q3SY69 923 aa13.74□□□□□ -0.21
CHD3-203ENST00000380358 TSPYL2Q9H2G4 693 aaPredicted RBP13.74□□□□□ -0.21
CHD3-203ENST00000380358 CSGALNACT2Q8N6G5 542 aa13.74□□□□□ -0.21
CHD3-203ENST00000380358 HIBADHP31937 336 aaKnown RBP13.74□□□□□ -0.21
CHD3-203ENST00000380358 DISC1Q9NRI5 854 aa13.74□□□□□ -0.21
CHD3-203ENST00000380358 SUGT1Q9Y2Z0 365 aa13.74□□□□□ -0.21
CHD3-203ENST00000380358 CLNS1AP54105 237 aaKnown RBP13.74□□□□□ -0.21
CHD3-203ENST00000380358 IGSF22Q8N9C0 903 aa13.74□□□□□ -0.21
CHD3-203ENST00000380358 VCXQ9H320 206 aa13.74□□□□□ -0.21
CHD3-203ENST00000380358 HACD3Q9P035 362 aa13.74□□□□□ -0.21
CHD3-203ENST00000380358 NPR1P16066 1061 aa13.73□□□□□ -0.21
CHD3-203ENST00000380358 TBCCQ15814 346 aa13.73□□□□□ -0.21
CHD3-203ENST00000380358 KIAA1841Q6NSI8 718 aa13.73□□□□□ -0.21
CHD3-203ENST00000380358 TMCO5AQ8N6Q1 288 aa13.73□□□□□ -0.21
CHD3-203ENST00000380358 PHKBQ93100 1093 aa13.73□□□□□ -0.21
CHD3-203ENST00000380358 ZRANB1Q9UGI0 708 aa13.73□□□□□ -0.21
CHD3-203ENST00000380358 DMRT2Q9Y5R5 561 aa13.73□□□□□ -0.21
CHD3-203ENST00000380358 IQUBQ8NA54 791 aa13.73□□□□□ -0.21
CHD3-203ENST00000380358 WDR7Q9Y4E6 1490 aa13.73□□□□□ -0.21
CHD3-203ENST00000380358 KLHDC4Q8TBB5 520 aa13.73□□□□□ -0.21
CHD3-203ENST00000380358 RPS6KC1Q96S38 1066 aa13.73□□□□□ -0.21
CHD3-203ENST00000380358 PARP2Q9UGN5 583 aa13.73□□□□□ -0.21
CHD3-203ENST00000380358 IGHDP01880 384 aa13.73□□□□□ -0.21
CHD3-203ENST00000380358 CALCRLQ16602 461 aa13.73□□□□□ -0.21
CHD3-203ENST00000380358 TAB2Q9NYJ8 693 aa13.73□□□□□ -0.21
CHD3-203ENST00000380358 DNM3Q9UQ16 869 aa13.73□□□□□ -0.21
CHD3-203ENST00000380358 ACTN4O43707 911 aaKnown RBP13.73□□□□□ -0.21
CHD3-203ENST00000380358 UBXN2AP68543 259 aa13.73□□□□□ -0.21
CHD3-203ENST00000380358 G3BP2Q9UN86 482 aaKnown RBP13.73□□□□□ -0.21
CHD3-203ENST00000380358 ANKRD2Q9GZV1 360 aa13.73□□□□□ -0.21
CHD3-203ENST00000380358 PLCB1Q9NQ66 1216 aa13.73□□□□□ -0.21
CHD3-203ENST00000380358 FRMD3A2A2Y4 597 aa13.72□□□□□ -0.21
CHD3-203ENST00000380358 STAM2O75886 525 aa13.72□□□□□ -0.21
CHD3-203ENST00000380358 STMN1P16949 149 aa13.72□□□□□ -0.21
CHD3-203ENST00000380358 IL15P40933 162 aaPredicted RBP13.72□□□□□ -0.21
CHD3-203ENST00000380358 GNGT2O14610 69 aa13.72□□□□□ -0.21
CHD3-203ENST00000380358 IL2RBP14784 551 aa13.72□□□□□ -0.21
CHD3-203ENST00000380358 AK2P54819 239 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms