RNA–Protein interactions for RNA: ENST00000379236.3

TNFRSF4-201, Transcript of TNF receptor superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF4, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4-201ENST00000379236 C12orf42Q96LP6 360 aa29.62■■■□□ 2.33
TNFRSF4-201ENST00000379236 KIAA1683Q9H0B3 1180 aa29.62■■■□□ 2.33
TNFRSF4-201ENST00000379236 MORF4L1Q9UBU8 362 aa29.62■■■□□ 2.33
TNFRSF4-201ENST00000379236 USP17L15C9J2P7 530 aa29.61■■■□□ 2.33
TNFRSF4-201ENST00000379236 USP17L13C9JLJ4 530 aa29.61■■■□□ 2.33
TNFRSF4-201ENST00000379236 USP17L12C9JPN9 530 aa29.61■■■□□ 2.33
TNFRSF4-201ENST00000379236 USP17L11C9JVI0 530 aa29.61■■■□□ 2.33
TNFRSF4-201ENST00000379236 USP17L21D6R901 530 aa29.61■■■□□ 2.33
TNFRSF4-201ENST00000379236 USP17L18D6R9N7 530 aa29.61■■■□□ 2.33
TNFRSF4-201ENST00000379236 USP17L22D6RA61 530 aa29.61■■■□□ 2.33
TNFRSF4-201ENST00000379236 USP17L17D6RBQ6 530 aa29.61■■■□□ 2.33
TNFRSF4-201ENST00000379236 USP17L19D6RCP7 530 aa29.61■■■□□ 2.33
TNFRSF4-201ENST00000379236 USP17L20D6RJB6 530 aa29.61■■■□□ 2.33
TNFRSF4-201ENST00000379236 RNF113AO15541 343 aaKnown RBP29.61■■■□□ 2.33
TNFRSF4-201ENST00000379236 GLRX3O76003 335 aaKnown RBP29.61■■■□□ 2.33
TNFRSF4-201ENST00000379236 USP17L24Q0WX57 530 aa29.61■■■□□ 2.33
TNFRSF4-201ENST00000379236 TMEM179Q6ZVK1 233 aa29.61■■■□□ 2.33
TNFRSF4-201ENST00000379236 SLC44A5Q8NCS7 719 aa29.61■■■□□ 2.33
TNFRSF4-201ENST00000379236 GPRC5AQ8NFJ5 357 aa29.61■■■□□ 2.33
TNFRSF4-201ENST00000379236 APPBP2Q92624 585 aa29.61■■■□□ 2.33
TNFRSF4-201ENST00000379236 BRCA2P51587 3418 aa29.6■■■□□ 2.33
TNFRSF4-201ENST00000379236 IRF5Q13568 498 aa29.6■■■□□ 2.33
TNFRSF4-201ENST00000379236 MTFR1Q15390 333 aa29.6■■■□□ 2.33
TNFRSF4-201ENST00000379236 ANKRD45Q5TZF3 282 aa29.6■■■□□ 2.33
TNFRSF4-201ENST00000379236 C12orf60Q5U649 245 aa29.6■■■□□ 2.33
TNFRSF4-201ENST00000379236 ACER1Q8TDN7 264 aa29.6■■■□□ 2.33
TNFRSF4-201ENST00000379236 PAGR1Q9BTK6 254 aa29.6■■■□□ 2.33
TNFRSF4-201ENST00000379236 CWC22Q9HCG8 908 aaKnown RBP29.6■■■□□ 2.33
TNFRSF4-201ENST00000379236 ARPP21Q9UBL0 812 aaPredicted RBP29.6■■■□□ 2.33
TNFRSF4-201ENST00000379236 MX1P20591 662 aa29.59■■■□□ 2.33
TNFRSF4-201ENST00000379236 PXYLP1Q8TE99 480 aa29.59■■■□□ 2.33
TNFRSF4-201ENST00000379236 GCC1Q96CN9 775 aa29.59■■■□□ 2.33
TNFRSF4-201ENST00000379236 CYP2D7A0A087X1C5 515 aa29.58■■■□□ 2.33
TNFRSF4-201ENST00000379236 CCL5P13501 91 aa29.58■■■□□ 2.33
TNFRSF4-201ENST00000379236 ELNP15502 786 aa29.58■■■□□ 2.33
TNFRSF4-201ENST00000379236 VCAM1P19320 739 aa29.58■■■□□ 2.33
TNFRSF4-201ENST00000379236 GUCY1A2P33402 732 aa29.58■■■□□ 2.33
TNFRSF4-201ENST00000379236 AAMPQ13685 434 aa29.58■■■□□ 2.33
TNFRSF4-201ENST00000379236 NKX2-3Q8TAU0 364 aa29.58■■■□□ 2.33
TNFRSF4-201ENST00000379236 FSD1Q9BTV5 496 aa29.58■■■□□ 2.33
TNFRSF4-201ENST00000379236 RNF208Q9H0X6 261 aa29.58■■■□□ 2.33
TNFRSF4-201ENST00000379236 ARHGEF10LQ9HCE6 1279 aa29.58■■■□□ 2.33
TNFRSF4-201ENST00000379236 CDK8P49336 464 aa29.57■■■□□ 2.32
TNFRSF4-201ENST00000379236 CCDC17Q96LX7 622 aa29.57■■■□□ 2.32
TNFRSF4-201ENST00000379236 STRBPQ96SI9 672 aaKnown RBP29.57■■■□□ 2.32
TNFRSF4-201ENST00000379236 SH2D4AQ9H788 454 aa29.57■■■□□ 2.32
TNFRSF4-201ENST00000379236 GNAT2P19087 354 aa29.56■■■□□ 2.32
TNFRSF4-201ENST00000379236 ERVK-9P63128 1117 aa29.56■■■□□ 2.32
TNFRSF4-201ENST00000379236 ERVK-24P63145 666 aa29.56■■■□□ 2.32
TNFRSF4-201ENST00000379236 HDAC1Q13547 482 aaPredicted RBP29.56■■■□□ 2.32
TNFRSF4-201ENST00000379236 CTR9Q6PD62 1173 aa29.56■■■□□ 2.32
TNFRSF4-201ENST00000379236 C16orf86Q6ZW13 317 aa29.56■■■□□ 2.32
TNFRSF4-201ENST00000379236 OTUD7AQ8TE49 926 aaPredicted RBP29.56■■■□□ 2.32
TNFRSF4-201ENST00000379236 PLXNB2O15031 1838 aa29.56■■■□□ 2.32
TNFRSF4-201ENST00000379236 INHAP05111 366 aa29.55■■■□□ 2.32
TNFRSF4-201ENST00000379236 AKR1B1P15121 316 aa29.55■■■□□ 2.32
TNFRSF4-201ENST00000379236 ICA1Q05084 483 aa29.55■■■□□ 2.32
TNFRSF4-201ENST00000379236 PRPF38BQ5VTL8 546 aaKnown RBP29.55■■■□□ 2.32
TNFRSF4-201ENST00000379236 CATSPERGQ6ZRH7 1159 aa29.55■■■□□ 2.32
TNFRSF4-201ENST00000379236 PI4K2BQ8TCG2 481 aa29.55■■■□□ 2.32
TNFRSF4-201ENST00000379236 OSBP2Q969R2 916 aa29.55■■■□□ 2.32
TNFRSF4-201ENST00000379236 RPAP3Q9H6T3 665 aaPredicted RBP29.55■■■□□ 2.32
TNFRSF4-201ENST00000379236 TXNRD2Q9NNW7 524 aa29.55■■■□□ 2.32
TNFRSF4-201ENST00000379236 GPAA1O43292 621 aa29.54■■■□□ 2.32
TNFRSF4-201ENST00000379236 APPP05067 770 aa29.54■■■□□ 2.32
TNFRSF4-201ENST00000379236 MAPK4P31152 587 aa29.54■■■□□ 2.32
TNFRSF4-201ENST00000379236 RBPJLQ9UBG7 517 aa29.54■■■□□ 2.32
TNFRSF4-201ENST00000379236 TDO2P48775 406 aa29.53■■■□□ 2.32
TNFRSF4-201ENST00000379236 CCNA1P78396 465 aa29.53■■■□□ 2.32
TNFRSF4-201ENST00000379236 GIMAP6Q6P9H5 292 aa29.53■■■□□ 2.32
TNFRSF4-201ENST00000379236 RABGAP1Q9Y3P9 1069 aa29.53■■■□□ 2.32
TNFRSF4-201ENST00000379236 MINDY4BA8MYZ0 360 aa29.52■■■□□ 2.32
TNFRSF4-201ENST00000379236 PEX10O60683 326 aa29.52■■■□□ 2.32
TNFRSF4-201ENST00000379236 GJB1P08034 283 aa29.52■■■□□ 2.32
TNFRSF4-201ENST00000379236 SOCS4Q8WXH5 440 aa29.52■■■□□ 2.32
TNFRSF4-201ENST00000379236 NUDT12Q9BQG2 462 aa29.52■■■□□ 2.32
TNFRSF4-201ENST00000379236 TANGO6Q9C0B7 1094 aa29.52■■■□□ 2.32
TNFRSF4-201ENST00000379236 A0A1W2PRG0 241 aa29.51■■■□□ 2.31
TNFRSF4-201ENST00000379236 GSG1L2A8MUP6 293 aa29.51■■■□□ 2.31
TNFRSF4-201ENST00000379236 M0R2C6 588 aa29.51■■■□□ 2.31
TNFRSF4-201ENST00000379236 ATP2B2Q01814 1243 aa29.51■■■□□ 2.31
TNFRSF4-201ENST00000379236 UNC93B1Q9H1C4 597 aa29.51■■■□□ 2.31
TNFRSF4-201ENST00000379236 MKNK2Q9HBH9 465 aa29.51■■■□□ 2.31
TNFRSF4-201ENST00000379236 MKI67P46013 3256 aaKnown RBP29.5■■■□□ 2.31
TNFRSF4-201ENST00000379236 GJA8P48165 433 aa29.5■■■□□ 2.31
TNFRSF4-201ENST00000379236 SBK1Q52WX2 424 aa29.5■■■□□ 2.31
TNFRSF4-201ENST00000379236 WDR78Q5VTH9 848 aa29.5■■■□□ 2.31
TNFRSF4-201ENST00000379236 STK11IPQ8N1F8 1099 aa29.5■■■□□ 2.31
TNFRSF4-201ENST00000379236 NACAP1Q9BZK3 213 aa29.5■■■□□ 2.31
TNFRSF4-201ENST00000379236 RWDD1Q9H446 243 aaPredicted RBP29.5■■■□□ 2.31
TNFRSF4-201ENST00000379236 SMIM22K7EJ46 135 aa29.49■■■□□ 2.31
TNFRSF4-201ENST00000379236 HMGCRP04035 888 aa29.49■■■□□ 2.31
TNFRSF4-201ENST00000379236 Q3C1V9 767 aa29.49■■■□□ 2.31
TNFRSF4-201ENST00000379236 CLEC10AQ8IUN9 316 aa29.49■■■□□ 2.31
TNFRSF4-201ENST00000379236 LPAR1Q92633 364 aa29.49■■■□□ 2.31
TNFRSF4-201ENST00000379236 MYH4Q9Y623 1939 aa29.49■■■□□ 2.31
TNFRSF4-201ENST00000379236 CYP2B6P20813 491 aa29.48■■■□□ 2.31
TNFRSF4-201ENST00000379236 GPR142Q7Z601 462 aa29.48■■■□□ 2.31
TNFRSF4-201ENST00000379236 PLEKHH3Q7Z736 793 aa29.48■■■□□ 2.31
TNFRSF4-201ENST00000379236 KANSL2Q9H9L4 492 aa29.48■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms