RNA–Protein interactions for RNA: ENST00000377327.8

CRNKL1-201, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-201ENST00000377327 RTL9Q8NET4 1388 aa10.1□□□□□ -0.79
CRNKL1-201ENST00000377327 STARD3NLO95772 234 aa10.1□□□□□ -0.79
CRNKL1-201ENST00000377327 HOXC9P31274 260 aa10.1□□□□□ -0.79
CRNKL1-201ENST00000377327 RBBP5Q15291 538 aaKnown RBP10.1□□□□□ -0.79
CRNKL1-201ENST00000377327 SLC9C1Q4G0N8 1177 aa10.1□□□□□ -0.79
CRNKL1-201ENST00000377327 SPTY2D1Q68D10 685 aaPredicted RBP10.1□□□□□ -0.79
CRNKL1-201ENST00000377327 TYW1BQ6NUM6 668 aa10.1□□□□□ -0.79
CRNKL1-201ENST00000377327 C2CD5Q86YS7 1000 aa10.1□□□□□ -0.79
CRNKL1-201ENST00000377327 TBC1D31Q96DN5 1066 aa10.1□□□□□ -0.79
CRNKL1-201ENST00000377327 TLR7Q9NYK1 1049 aaKnown RBP10.1□□□□□ -0.79
CRNKL1-201ENST00000377327 PARP3Q9Y6F1 533 aa10.1□□□□□ -0.79
CRNKL1-201ENST00000377327 CEP104O60308 925 aa10.1□□□□□ -0.79
CRNKL1-201ENST00000377327 PDE4DQ08499 809 aa10.1□□□□□ -0.79
CRNKL1-201ENST00000377327 SF3A3Q12874 501 aaKnown RBP eCLIP10.1□□□□□ -0.79
CRNKL1-201ENST00000377327 TTC38Q5R3I4 469 aa10.1□□□□□ -0.79
CRNKL1-201ENST00000377327 GSDMAQ96QA5 445 aa10.1□□□□□ -0.79
CRNKL1-201ENST00000377327 TACO1Q9BSH4 297 aaKnown RBP10.1□□□□□ -0.79
CRNKL1-201ENST00000377327 ACTR5Q9H9F9 607 aaPredicted RBP10.1□□□□□ -0.79
CRNKL1-201ENST00000377327 RNMTO43148 476 aaKnown RBP10.09□□□□□ -0.79
CRNKL1-201ENST00000377327 GGCXP38435 758 aa10.09□□□□□ -0.79
CRNKL1-201ENST00000377327 CORO7P57737 925 aa10.09□□□□□ -0.79
CRNKL1-201ENST00000377327 NNTQ13423 1086 aa10.09□□□□□ -0.79
CRNKL1-201ENST00000377327 INTS8Q75QN2 995 aaKnown RBP10.09□□□□□ -0.79
CRNKL1-201ENST00000377327 CROCCP2Q86T23 111 aa10.09□□□□□ -0.79
CRNKL1-201ENST00000377327 IQCDQ96DY2 449 aa10.09□□□□□ -0.79
CRNKL1-201ENST00000377327 ZNF287Q9HBT7 754 aa10.09□□□□□ -0.79
CRNKL1-201ENST00000377327 UTP11Q9Y3A2 253 aaKnown RBP10.09□□□□□ -0.79
CRNKL1-201ENST00000377327 ARHGEF10O15013 1369 aa10.09□□□□□ -0.79
CRNKL1-201ENST00000377327 GNAT2P19087 354 aa10.09□□□□□ -0.79
CRNKL1-201ENST00000377327 GBP1P32455 592 aa10.09□□□□□ -0.79
CRNKL1-201ENST00000377327 ATP2B2Q01814 1243 aa10.09□□□□□ -0.79
CRNKL1-201ENST00000377327 GUCY2DQ02846 1103 aa10.09□□□□□ -0.79
CRNKL1-201ENST00000377327 ZNF444Q8N0Y2 327 aaPredicted RBP10.09□□□□□ -0.79
CRNKL1-201ENST00000377327 PPFIBP2Q8ND30 876 aa10.09□□□□□ -0.79
CRNKL1-201ENST00000377327 PLVAPQ9BX97 442 aa10.09□□□□□ -0.79
CRNKL1-201ENST00000377327 ADGRG1Q9Y653 693 aa10.09□□□□□ -0.79
CRNKL1-201ENST00000377327 ACTN4O43707 911 aaKnown RBP10.09□□□□□ -0.79
CRNKL1-201ENST00000377327 VSNL1P62760 191 aa10.09□□□□□ -0.79
CRNKL1-201ENST00000377327 PDE4BQ07343 736 aa10.09□□□□□ -0.79
CRNKL1-201ENST00000377327 RPS6KA1Q15418 735 aa10.09□□□□□ -0.79
CRNKL1-201ENST00000377327 PPP1R12CQ9BZL4 782 aa10.09□□□□□ -0.79
CRNKL1-201ENST00000377327 STIM2Q9P246 746 aa10.09□□□□□ -0.79
CRNKL1-201ENST00000377327 V9GY48 417 aaPredicted RBP10.09□□□□□ -0.79
CRNKL1-201ENST00000377327 NDUFA10O95299 355 aa10.08□□□□□ -0.8
CRNKL1-201ENST00000377327 ALDH3A1P30838 453 aa10.08□□□□□ -0.8
CRNKL1-201ENST00000377327 RAPGEF1Q13905 1077 aa10.08□□□□□ -0.8
CRNKL1-201ENST00000377327 TSNAXIP1Q2TAA8 658 aa10.08□□□□□ -0.8
CRNKL1-201ENST00000377327 CAVIN4Q5BKX8 364 aa10.08□□□□□ -0.8
CRNKL1-201ENST00000377327 CCDC63Q8NA47 563 aa10.08□□□□□ -0.8
CRNKL1-201ENST00000377327 ALDH8A1Q9H2A2 487 aaPredicted RBP10.08□□□□□ -0.8
CRNKL1-201ENST00000377327 DBNLQ9UJU6 430 aaKnown RBP10.08□□□□□ -0.8
CRNKL1-201ENST00000377327 ZMYM6O95789 1325 aa10.08□□□□□ -0.8
CRNKL1-201ENST00000377327 MFAP3LO75121 409 aa10.08□□□□□ -0.8
CRNKL1-201ENST00000377327 FGAP02671 866 aa10.08□□□□□ -0.8
CRNKL1-201ENST00000377327 GPTP24298 496 aa10.08□□□□□ -0.8
CRNKL1-201ENST00000377327 PDCLQ13371 301 aa10.08□□□□□ -0.8
CRNKL1-201ENST00000377327 SF3B2Q13435 895 aaKnown RBP10.08□□□□□ -0.8
CRNKL1-201ENST00000377327 TOM1L2Q6ZVM7 507 aa10.08□□□□□ -0.8
CRNKL1-201ENST00000377327 CCDC25Q86WR0 208 aa10.08□□□□□ -0.8
CRNKL1-201ENST00000377327 FUT8Q9BYC5 575 aa10.08□□□□□ -0.8
CRNKL1-201ENST00000377327 TRIM31Q9BZY9 425 aa10.08□□□□□ -0.8
CRNKL1-201ENST00000377327 TRIM6Q9C030 488 aaPredicted RBP10.08□□□□□ -0.8
CRNKL1-201ENST00000377327 GNAQP50148 359 aa10.08□□□□□ -0.8
CRNKL1-201ENST00000377327 TEX2Q8IWB9 1127 aa10.08□□□□□ -0.8
CRNKL1-201ENST00000377327 FAM207AQ9NSI2 230 aaPredicted RBP10.08□□□□□ -0.8
CRNKL1-201ENST00000377327 NKIRAS1Q9NYS0 192 aa10.08□□□□□ -0.8
CRNKL1-201ENST00000377327 HIP1RO75146 1068 aa10.07□□□□□ -0.8
CRNKL1-201ENST00000377327 CYP7A1P22680 504 aa10.07□□□□□ -0.8
CRNKL1-201ENST00000377327 CCDC38Q502W7 563 aa10.07□□□□□ -0.8
CRNKL1-201ENST00000377327 EMBQ6PCB8 327 aa10.07□□□□□ -0.8
CRNKL1-201ENST00000377327 RRAGAQ7L523 313 aa10.07□□□□□ -0.8
CRNKL1-201ENST00000377327 VSIG1Q86XK7 387 aa10.07□□□□□ -0.8
CRNKL1-201ENST00000377327 FNBP4Q8N3X1 1017 aaPredicted RBP10.07□□□□□ -0.8
CRNKL1-201ENST00000377327 COG1Q8WTW3 980 aa10.07□□□□□ -0.8
CRNKL1-201ENST00000377327 NAP1L3Q99457 506 aaPredicted RBP10.07□□□□□ -0.8
CRNKL1-201ENST00000377327 VCXQ9H320 206 aa10.07□□□□□ -0.8
CRNKL1-201ENST00000377327 ATF3P18847 181 aa10.07□□□□□ -0.8
CRNKL1-201ENST00000377327 ZBTB16Q05516 673 aa10.07□□□□□ -0.8
CRNKL1-201ENST00000377327 CETN1Q12798 172 aa10.07□□□□□ -0.8
CRNKL1-201ENST00000377327 CALCOCO2Q13137 446 aa10.07□□□□□ -0.8
CRNKL1-201ENST00000377327 ZKSCAN8Q15776 578 aaPredicted RBP10.07□□□□□ -0.8
CRNKL1-201ENST00000377327 PIK3AP1Q6ZUJ8 805 aa10.07□□□□□ -0.8
CRNKL1-201ENST00000377327 CCDC170Q8IYT3 715 aa10.07□□□□□ -0.8
CRNKL1-201ENST00000377327 IRX2Q9BZI1 471 aaPredicted RBP10.07□□□□□ -0.8
CRNKL1-201ENST00000377327 NR1D1P20393 614 aa10.07□□□□□ -0.8
CRNKL1-201ENST00000377327 PPP2R5BQ15173 497 aa10.07□□□□□ -0.8
CRNKL1-201ENST00000377327 CNNM4Q6P4Q7 775 aa10.07□□□□□ -0.8
CRNKL1-201ENST00000377327 TAOK1Q7L7X3 1001 aa10.07□□□□□ -0.8
CRNKL1-201ENST00000377327 HNRNPLLQ8WVV9 542 aaKnown RBP10.07□□□□□ -0.8
CRNKL1-201ENST00000377327 TCP11Q8WWU5 503 aa10.07□□□□□ -0.8
CRNKL1-201ENST00000377327 DDX12PQ92771 950 aa10.07□□□□□ -0.8
CRNKL1-201ENST00000377327 DPF2Q92785 391 aa10.07□□□□□ -0.8
CRNKL1-201ENST00000377327 COPRSQ9NQ92 184 aa10.07□□□□□ -0.8
CRNKL1-201ENST00000377327 KDRP35968 1356 aa10.07□□□□□ -0.8
CRNKL1-201ENST00000377327 TRAF5O00463 557 aa10.07□□□□□ -0.8
CRNKL1-201ENST00000377327 C2orf54Q08AI8 447 aa10.07□□□□□ -0.8
CRNKL1-201ENST00000377327 VWA3BQ502W6 1294 aa10.07□□□□□ -0.8
CRNKL1-201ENST00000377327 ARMC9Q7Z3E5 817 aa10.07□□□□□ -0.8
CRNKL1-201ENST00000377327 GPIHBP1Q8IV16 184 aa10.07□□□□□ -0.8
CRNKL1-201ENST00000377327 NFATC2IPQ8NCF5 419 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms