RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 RNF169Q8NCN4 708 aa15.18■□□□□ 0.02
GPC6-201ENST00000377047 FBF1Q8TES7 1133 aa15.18■□□□□ 0.02
GPC6-201ENST00000377047 CARD10Q9BWT7 1032 aa15.18■□□□□ 0.02
GPC6-201ENST00000377047 FAM102BQ5T8I3 360 aa15.18■□□□□ 0.02
GPC6-201ENST00000377047 KRT27Q7Z3Y8 459 aa15.18■□□□□ 0.02
GPC6-201ENST00000377047 ZMYND15Q9H091 742 aa15.18■□□□□ 0.02
GPC6-201ENST00000377047 INF2Q27J81 1249 aa15.18■□□□□ 0.02
GPC6-201ENST00000377047 RHOXF2BP0C7M4 288 aa15.17■□□□□ 0.02
GPC6-201ENST00000377047 RHOXF2Q9BQY4 288 aa15.17■□□□□ 0.02
GPC6-201ENST00000377047 ANKRD35Q8N283 1001 aa15.17■□□□□ 0.02
GPC6-201ENST00000377047 DEPTORQ8TB45 409 aa15.17■□□□□ 0.02
GPC6-201ENST00000377047 ZBTB9Q96C00 473 aa15.17■□□□□ 0.02
GPC6-201ENST00000377047 HAUS7Q99871 368 aa15.17■□□□□ 0.02
GPC6-201ENST00000377047 ATP8A2Q9NTI2 1148 aa15.17■□□□□ 0.02
GPC6-201ENST00000377047 TLDC2A0PJX2 215 aa15.17■□□□□ 0.02
GPC6-201ENST00000377047 JAK2O60674 1132 aa15.17■□□□□ 0.02
GPC6-201ENST00000377047 CD19P15391 556 aa15.17■□□□□ 0.02
GPC6-201ENST00000377047 ICA1Q05084 483 aa15.17■□□□□ 0.02
GPC6-201ENST00000377047 UAP1Q16222 522 aaPredicted RBP15.17■□□□□ 0.02
GPC6-201ENST00000377047 SYT10Q6XYQ8 523 aa15.17■□□□□ 0.02
GPC6-201ENST00000377047 PSTPIP2Q9H939 334 aa15.17■□□□□ 0.02
GPC6-201ENST00000377047 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.17■□□□□ 0.02
GPC6-201ENST00000377047 V9GYY5 206 aaPredicted RBP15.17■□□□□ 0.02
GPC6-201ENST00000377047 PLEKHG1Q9ULL1 1385 aa15.17■□□□□ 0.02
GPC6-201ENST00000377047 UGGT1Q9NYU2 1555 aa15.17■□□□□ 0.02
GPC6-201ENST00000377047 CLRN2A0PK11 232 aa15.17■□□□□ 0.02
GPC6-201ENST00000377047 PDE6AP16499 860 aa15.17■□□□□ 0.02
GPC6-201ENST00000377047 BLZF1Q9H2G9 400 aa15.17■□□□□ 0.02
GPC6-201ENST00000377047 POLR2MP0CAP2 368 aa15.17■□□□□ 0.02
GPC6-201ENST00000377047 GIMAP7Q8NHV1 300 aa15.17■□□□□ 0.02
GPC6-201ENST00000377047 MRPL11Q9Y3B7 192 aaKnown RBP15.17■□□□□ 0.02
GPC6-201ENST00000377047 KCNQ4P56696 695 aa15.16■□□□□ 0.02
GPC6-201ENST00000377047 ZBTB16Q05516 673 aa15.16■□□□□ 0.02
GPC6-201ENST00000377047 TRIM14Q14142 442 aa15.16■□□□□ 0.02
GPC6-201ENST00000377047 GPIHBP1Q8IV16 184 aa15.16■□□□□ 0.02
GPC6-201ENST00000377047 JAKMIP2Q96AA8 810 aa15.16■□□□□ 0.02
GPC6-201ENST00000377047 SRRTQ9BXP5 876 aaKnown RBP15.16■□□□□ 0.02
GPC6-201ENST00000377047 NLRP1Q9C000 1473 aa15.16■□□□□ 0.02
GPC6-201ENST00000377047 FAM135BQ49AJ0 1406 aa15.16■□□□□ 0.02
GPC6-201ENST00000377047 FLOT1O75955 427 aa15.16■□□□□ 0.02
GPC6-201ENST00000377047 GOLGA8HP0CJ92 632 aa15.16■□□□□ 0.02
GPC6-201ENST00000377047 ERCC5P28715 1186 aaPredicted RBP15.16■□□□□ 0.02
GPC6-201ENST00000377047 PRR16Q569H4 304 aa15.16■□□□□ 0.02
GPC6-201ENST00000377047 XDHP47989 1333 aa15.16■□□□□ 0.02
GPC6-201ENST00000377047 CSRNP2Q9H175 543 aa15.16■□□□□ 0.02
GPC6-201ENST00000377047 USTQ9Y2C2 406 aa15.16■□□□□ 0.02
GPC6-201ENST00000377047 METP08581 1390 aa15.16■□□□□ 0.02
GPC6-201ENST00000377047 TNNI1P19237 187 aa15.16■□□□□ 0.02
GPC6-201ENST00000377047 TICAM2Q86XR7 235 aa15.16■□□□□ 0.02
GPC6-201ENST00000377047 STAMQ92783 540 aa15.16■□□□□ 0.02
GPC6-201ENST00000377047 KCNK9Q9NPC2 374 aa15.16■□□□□ 0.02
GPC6-201ENST00000377047 ZNF202O95125 648 aa15.16■□□□□ 0.02
GPC6-201ENST00000377047 SERPINB2P05120 415 aa15.16■□□□□ 0.02
GPC6-201ENST00000377047 ANO3Q9BYT9 981 aa15.16■□□□□ 0.02
GPC6-201ENST00000377047 SH3BP5O60239 455 aa15.15■□□□□ 0.02
GPC6-201ENST00000377047 SLU7O95391 586 aaKnown RBP15.15■□□□□ 0.02
GPC6-201ENST00000377047 PSMC4P43686 418 aa15.15■□□□□ 0.02
GPC6-201ENST00000377047 RDH13Q8NBN7 331 aa15.15■□□□□ 0.02
GPC6-201ENST00000377047 ATRIPQ8WXE1 791 aa15.15■□□□□ 0.02
GPC6-201ENST00000377047 USP44Q9H0E7 712 aa15.15■□□□□ 0.02
GPC6-201ENST00000377047 TUBB4AP04350 444 aa15.15■□□□□ 0.02
GPC6-201ENST00000377047 POSTNQ15063 836 aa15.15■□□□□ 0.02
GPC6-201ENST00000377047 CDC37L1Q7L3B6 337 aa15.15■□□□□ 0.02
GPC6-201ENST00000377047 FBXO11Q86XK2 927 aa15.15■□□□□ 0.02
GPC6-201ENST00000377047 GABPAQ06546 454 aa15.15■□□□□ 0.02
GPC6-201ENST00000377047 EP400NLQ6ZTU2 488 aa15.15■□□□□ 0.02
GPC6-201ENST00000377047 ZNF526Q8TF50 670 aaPredicted RBP15.15■□□□□ 0.02
GPC6-201ENST00000377047 NELFBQ8WX92 580 aa15.15■□□□□ 0.02
GPC6-201ENST00000377047 ZFP91Q96JP5 570 aaPredicted RBP15.15■□□□□ 0.02
GPC6-201ENST00000377047 ABCB5Q2M3G0 1257 aa15.15■□□□□ 0.02
GPC6-201ENST00000377047 BEND3Q5T5X7 828 aa15.15■□□□□ 0.02
GPC6-201ENST00000377047 UTP14CQ5TAP6 766 aaKnown RBP15.15■□□□□ 0.02
GPC6-201ENST00000377047 DCUN1D2Q6PH85 259 aa15.15■□□□□ 0.02
GPC6-201ENST00000377047 PNMA1Q8ND90 353 aa15.15■□□□□ 0.02
GPC6-201ENST00000377047 SEC62Q99442 399 aaKnown RBP15.15■□□□□ 0.02
GPC6-201ENST00000377047 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.15■□□□□ 0.02
GPC6-201ENST00000377047 STK10O94804 968 aaKnown RBP15.14■□□□□ 0.01
GPC6-201ENST00000377047 RNASE9P60153 205 aaKnown RBP15.14■□□□□ 0.01
GPC6-201ENST00000377047 CYP26C1Q6V0L0 522 aa15.14■□□□□ 0.01
GPC6-201ENST00000377047 UBLCP1Q8WVY7 318 aaPredicted RBP15.14■□□□□ 0.01
GPC6-201ENST00000377047 TTC14Q96N46 770 aa15.14■□□□□ 0.01
GPC6-201ENST00000377047 NT5C3AQ9H0P0 336 aa15.14■□□□□ 0.01
GPC6-201ENST00000377047 ZBTB1Q9Y2K1 713 aa15.14■□□□□ 0.01
GPC6-201ENST00000377047 ERBB4Q15303 1308 aa15.14■□□□□ 0.01
GPC6-201ENST00000377047 VAV2P52735 878 aa15.14■□□□□ 0.01
GPC6-201ENST00000377047 CCDC26Q8TAB7 109 aa15.14■□□□□ 0.01
GPC6-201ENST00000377047 TRERF1Q96PN7 1200 aa15.14■□□□□ 0.01
GPC6-201ENST00000377047 CLSTN2Q9H4D0 955 aa15.14■□□□□ 0.01
GPC6-201ENST00000377047 TAB2Q9NYJ8 693 aa15.14■□□□□ 0.01
GPC6-201ENST00000377047 KDM3AQ9Y4C1 1321 aa15.14■□□□□ 0.01
GPC6-201ENST00000377047 MCF2L2Q86YR7 1114 aa15.14■□□□□ 0.01
GPC6-201ENST00000377047 ERFEQ4G0M1 354 aa15.14■□□□□ 0.01
GPC6-201ENST00000377047 MYOM2P54296 1465 aa15.14■□□□□ 0.01
GPC6-201ENST00000377047 A0A0D9SFI3 127 aa15.14■□□□□ 0.01
GPC6-201ENST00000377047 NAP1L3Q99457 506 aaPredicted RBP15.14■□□□□ 0.01
GPC6-201ENST00000377047 TMEM232C9JQI7 657 aa15.13■□□□□ 0.01
GPC6-201ENST00000377047 MAP7D1Q3KQU3 841 aa15.13■□□□□ 0.01
GPC6-201ENST00000377047 CFAP157Q5JU67 520 aa15.13■□□□□ 0.01
GPC6-201ENST00000377047 UBL4BQ8N7F7 174 aa15.13■□□□□ 0.01
GPC6-201ENST00000377047 MLKLQ8NB16 471 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms