RNA–Protein interactions for RNA: ENST00000376802.2

HLA-A-201, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 1,334 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-201ENST00000376802 PDE6AP16499 860 aa21.2■□□□□ 0.98
HLA-A-201ENST00000376802 GUCY1A2P33402 732 aa21.2■□□□□ 0.98
HLA-A-201ENST00000376802 GABPAQ06546 454 aa21.2■□□□□ 0.98
HLA-A-201ENST00000376802 RAB3GAP1Q15042 981 aa21.2■□□□□ 0.98
HLA-A-201ENST00000376802 GTF3C2Q8WUA4 911 aaPredicted RBP21.2■□□□□ 0.98
HLA-A-201ENST00000376802 OGDHLQ9ULD0 1010 aa21.2■□□□□ 0.98
HLA-A-201ENST00000376802 MAGEB6P1A0A0J9YX57 407 aa21.19■□□□□ 0.98
HLA-A-201ENST00000376802 TCRBV5S4A2TA0A5A2 114 aa21.19■□□□□ 0.98
HLA-A-201ENST00000376802 USP17L15C9J2P7 530 aa21.19■□□□□ 0.98
HLA-A-201ENST00000376802 USP17L13C9JLJ4 530 aa21.19■□□□□ 0.98
HLA-A-201ENST00000376802 USP17L11C9JVI0 530 aa21.19■□□□□ 0.98
HLA-A-201ENST00000376802 USP17L18D6R9N7 530 aa21.19■□□□□ 0.98
HLA-A-201ENST00000376802 USP17L22D6RA61 530 aa21.19■□□□□ 0.98
HLA-A-201ENST00000376802 USP17L17D6RBQ6 530 aa21.19■□□□□ 0.98
HLA-A-201ENST00000376802 USP17L19D6RCP7 530 aa21.19■□□□□ 0.98
HLA-A-201ENST00000376802 USP17L20D6RJB6 530 aa21.19■□□□□ 0.98
HLA-A-201ENST00000376802 PRKAR2AP13861 404 aaKnown RBP21.19■□□□□ 0.98
HLA-A-201ENST00000376802 USP17L24Q0WX57 530 aa21.19■□□□□ 0.98
HLA-A-201ENST00000376802 TTF1Q15361 905 aaPredicted RBP21.19■□□□□ 0.98
HLA-A-201ENST00000376802 CCL14Q16627 93 aa21.19■□□□□ 0.98
HLA-A-201ENST00000376802 SLC9C2Q5TAH2 1124 aa21.19■□□□□ 0.98
HLA-A-201ENST00000376802 CATSPERGQ6ZRH7 1159 aa21.19■□□□□ 0.98
HLA-A-201ENST00000376802 FEZ1Q99689 392 aa21.19■□□□□ 0.98
HLA-A-201ENST00000376802 ZBTB40Q9NUA8 1239 aa21.19■□□□□ 0.98
HLA-A-201ENST00000376802 RABGAP1Q9Y3P9 1069 aa21.19■□□□□ 0.98
HLA-A-201ENST00000376802 VCAM1P19320 739 aa21.18■□□□□ 0.98
HLA-A-201ENST00000376802 CACNB2Q08289 660 aaPredicted RBP21.18■□□□□ 0.98
HLA-A-201ENST00000376802 PLEKHH3Q7Z736 793 aa21.18■□□□□ 0.98
HLA-A-201ENST00000376802 RPAP2Q8IXW5 612 aaPredicted RBP21.18■□□□□ 0.98
HLA-A-201ENST00000376802 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.18■□□□□ 0.98
HLA-A-201ENST00000376802 STAP2Q9UGK3 403 aa21.18■□□□□ 0.98
HLA-A-201ENST00000376802 ZNF532Q9HCE3 1301 aa21.18■□□□□ 0.98
HLA-A-201ENST00000376802 RLFQ13129 1914 aa21.17■□□□□ 0.98
HLA-A-201ENST00000376802 APBB1O00213 710 aa21.17■□□□□ 0.98
HLA-A-201ENST00000376802 USP14P54578 494 aa21.17■□□□□ 0.98
HLA-A-201ENST00000376802 PDE3AQ14432 1141 aa21.17■□□□□ 0.98
HLA-A-201ENST00000376802 LBX2Q6XYB7 198 aa21.17■□□□□ 0.98
HLA-A-201ENST00000376802 TRMT44Q8IYL2 757 aaKnown RBP21.17■□□□□ 0.98
HLA-A-201ENST00000376802 CLASRPQ8N2M8 674 aaKnown RBP21.17■□□□□ 0.98
HLA-A-201ENST00000376802 KIF1BPQ96EK5 621 aa21.17■□□□□ 0.98
HLA-A-201ENST00000376802 EDC3Q96F86 508 aaKnown RBP21.17■□□□□ 0.98
HLA-A-201ENST00000376802 NBPF3Q9H094 633 aa21.17■□□□□ 0.98
HLA-A-201ENST00000376802 FRMPD3Q5JV73 1810 aa21.16■□□□□ 0.98
HLA-A-201ENST00000376802 GOLIM4O00461 696 aa21.16■□□□□ 0.98
HLA-A-201ENST00000376802 POLR3DP05423 398 aaPredicted RBP21.16■□□□□ 0.98
HLA-A-201ENST00000376802 ZKSCAN1P17029 563 aaPredicted RBP21.16■□□□□ 0.98
HLA-A-201ENST00000376802 RGS2P41220 211 aa21.16■□□□□ 0.98
HLA-A-201ENST00000376802 CRNKL1Q9BZJ0 848 aaKnown RBP21.16■□□□□ 0.98
HLA-A-201ENST00000376802 CABP5Q9NP86 173 aa21.16■□□□□ 0.98
HLA-A-201ENST00000376802 BTBD7Q9P203 1132 aa21.16■□□□□ 0.98
HLA-A-201ENST00000376802 COG6Q9Y2V7 657 aa21.16■□□□□ 0.98
HLA-A-201ENST00000376802 MYH8P13535 1937 aa21.16■□□□□ 0.98
HLA-A-201ENST00000376802 BAZ2AQ9UIF9 1905 aaKnown RBP21.15■□□□□ 0.98
HLA-A-201ENST00000376802 MS4A1P11836 297 aa21.15■□□□□ 0.98
HLA-A-201ENST00000376802 CCND3P30281 292 aaPredicted RBP21.15■□□□□ 0.98
HLA-A-201ENST00000376802 SEPT2Q15019 361 aa21.15■□□□□ 0.98
HLA-A-201ENST00000376802 LHX8Q68G74 356 aa21.15■□□□□ 0.98
HLA-A-201ENST00000376802 CCAR1Q8IX12 1150 aaKnown RBP21.15■□□□□ 0.98
HLA-A-201ENST00000376802 LCORLQ8N3X6 602 aa21.15■□□□□ 0.98
HLA-A-201ENST00000376802 DNAJC2Q99543 621 aaKnown RBP21.15■□□□□ 0.98
HLA-A-201ENST00000376802 APBA2Q99767 749 aa21.15■□□□□ 0.98
HLA-A-201ENST00000376802 C11orf49Q9H6J7 331 aa21.15■□□□□ 0.98
HLA-A-201ENST00000376802 DCP1AQ9NPI6 582 aaPredicted RBP21.15■□□□□ 0.98
HLA-A-201ENST00000376802 MCM9Q9NXL9 1143 aa21.15■□□□□ 0.98
HLA-A-201ENST00000376802 A0A1W2PPC1 479 aa21.14■□□□□ 0.97
HLA-A-201ENST00000376802 A0A1W2PRG0 241 aa21.14■□□□□ 0.97
HLA-A-201ENST00000376802 SPDYE16A6NNV3 312 aaPredicted RBP21.14■□□□□ 0.97
HLA-A-201ENST00000376802 IFIT2P09913 472 aaKnown RBP21.14■□□□□ 0.97
HLA-A-201ENST00000376802 MAP2K5Q13163 448 aa21.14■□□□□ 0.97
HLA-A-201ENST00000376802 SLFNL1Q499Z3 407 aa21.14■□□□□ 0.97
HLA-A-201ENST00000376802 C7orf61Q8IZ16 206 aa21.14■□□□□ 0.97
HLA-A-201ENST00000376802 SDR42E1Q8WUS8 393 aa21.14■□□□□ 0.97
HLA-A-201ENST00000376802 GDF15Q99988 308 aa21.14■□□□□ 0.97
HLA-A-201ENST00000376802 RPAP3Q9H6T3 665 aaPredicted RBP21.14■□□□□ 0.97
HLA-A-201ENST00000376802 FLRT1Q9NZU1 646 aa21.14■□□□□ 0.97
HLA-A-201ENST00000376802 PFASO15067 1338 aa21.14■□□□□ 0.97
HLA-A-201ENST00000376802 DNAH12Q6ZR08 3092 aa21.13■□□□□ 0.97
HLA-A-201ENST00000376802 CYP2D6P10635 497 aa21.13■□□□□ 0.97
HLA-A-201ENST00000376802 DDX19BQ9UMR2 479 aa21.13■□□□□ 0.97
HLA-A-201ENST00000376802 MYH7P12883 1935 aa21.13■□□□□ 0.97
HLA-A-201ENST00000376802 SOX1O00570 391 aaPredicted RBP21.12■□□□□ 0.97
HLA-A-201ENST00000376802 RAB11FIP3O75154 756 aa21.12■□□□□ 0.97
HLA-A-201ENST00000376802 HMMRO75330 724 aa21.12■□□□□ 0.97
HLA-A-201ENST00000376802 COL6A1P12109 1028 aa21.12■□□□□ 0.97
HLA-A-201ENST00000376802 PTPREP23469 700 aa21.12■□□□□ 0.97
HLA-A-201ENST00000376802 CCNA1P78396 465 aa21.12■□□□□ 0.97
HLA-A-201ENST00000376802 SIAH1Q8IUQ4 282 aa21.12■□□□□ 0.97
HLA-A-201ENST00000376802 SLC44A5Q8NCS7 719 aa21.12■□□□□ 0.97
HLA-A-201ENST00000376802 ARMT1Q9H993 441 aa21.12■□□□□ 0.97
HLA-A-201ENST00000376802 ZMYND8Q9ULU4 1186 aaPredicted RBP21.12■□□□□ 0.97
HLA-A-201ENST00000376802 SLC15A5A6NIM6 579 aa21.11■□□□□ 0.97
HLA-A-201ENST00000376802 PRKAB2O43741 272 aa21.11■□□□□ 0.97
HLA-A-201ENST00000376802 IGHA2P01877 340 aa21.11■□□□□ 0.97
HLA-A-201ENST00000376802 BMP8BP34820 402 aa21.11■□□□□ 0.97
HLA-A-201ENST00000376802 KIAA1755Q5JYT7 1200 aa21.11■□□□□ 0.97
HLA-A-201ENST00000376802 PAG1Q9NWQ8 432 aa21.11■□□□□ 0.97
HLA-A-201ENST00000376802 A0A0G2JMZ2 1700 aa21.11■□□□□ 0.97
HLA-A-201ENST00000376802 PARP14Q460N5 1801 aa21.11■□□□□ 0.97
HLA-A-201ENST00000376802 SMIM22K7EJ46 135 aa21.1■□□□□ 0.97
HLA-A-201ENST00000376802 HOXC6P09630 235 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 97.7 ms