RNA–Protein interactions for RNA: ENST00000376575.7

DDR1-228, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 1 (best) BASIC

Gene DDR1, Length 732 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-228ENST00000376575 IFNL1Q8IU54 200 aa23.6■■□□□ 1.37
DDR1-228ENST00000376575 RNF41Q9H4P4 317 aaPredicted RBP23.6■■□□□ 1.37
DDR1-228ENST00000376575 LOC285556D6RIA3 1793 aa23.6■■□□□ 1.37
DDR1-228ENST00000376575 CCL15-CCL14A0A0B4J2E2 113 aa23.59■■□□□ 1.37
DDR1-228ENST00000376575 TRIM75PA6NK02 468 aa23.59■■□□□ 1.37
DDR1-228ENST00000376575 IGF2BP3O00425 579 aaKnown RBP eCLIP23.59■■□□□ 1.37
DDR1-228ENST00000376575 MPHOSPH10O00566 681 aaKnown RBP23.59■■□□□ 1.37
DDR1-228ENST00000376575 NOVP48745 357 aa23.59■■□□□ 1.37
DDR1-228ENST00000376575 CCL15Q16663 113 aa23.59■■□□□ 1.37
DDR1-228ENST00000376575 MFSD6Q6ZSS7 791 aa23.59■■□□□ 1.37
DDR1-228ENST00000376575 NKX2-3Q8TAU0 364 aa23.59■■□□□ 1.37
DDR1-228ENST00000376575 KANSL2Q9H9L4 492 aa23.59■■□□□ 1.37
DDR1-228ENST00000376575 ANO2Q9NQ90 1003 aa23.59■■□□□ 1.37
DDR1-228ENST00000376575 A0A1W2PRG0 241 aa23.58■■□□□ 1.37
DDR1-228ENST00000376575 C19orf81C9J6K1 198 aa23.58■■□□□ 1.37
DDR1-228ENST00000376575 USP17L10C9JJH3 530 aa23.58■■□□□ 1.37
DDR1-228ENST00000376575 GPAT2Q6NUI2 795 aa23.58■■□□□ 1.37
DDR1-228ENST00000376575 ACER1Q8TDN7 264 aa23.58■■□□□ 1.37
DDR1-228ENST00000376575 KIAA1683Q9H0B3 1180 aa23.58■■□□□ 1.37
DDR1-228ENST00000376575 ZCCHC17Q9NP64 241 aaKnown RBP23.58■■□□□ 1.37
DDR1-228ENST00000376575 NEDD4P46934 1319 aa23.58■■□□□ 1.36
DDR1-228ENST00000376575 EPB41L2O43491 1005 aaKnown RBP23.57■■□□□ 1.36
DDR1-228ENST00000376575 TFAP4Q01664 338 aa23.57■■□□□ 1.36
DDR1-228ENST00000376575 MTMR2Q13614 643 aa23.57■■□□□ 1.36
DDR1-228ENST00000376575 FAM47AQ5JRC9 791 aa23.57■■□□□ 1.36
DDR1-228ENST00000376575 FASTKD5Q7L8L6 764 aaKnown RBP23.57■■□□□ 1.36
DDR1-228ENST00000376575 PROCA1Q8NCQ7 364 aaPredicted RBP23.57■■□□□ 1.36
DDR1-228ENST00000376575 C12orf42Q96LP6 360 aa23.57■■□□□ 1.36
DDR1-228ENST00000376575 CFHR5Q9BXR6 569 aa23.57■■□□□ 1.36
DDR1-228ENST00000376575 TAF6LQ9Y6J9 622 aa23.57■■□□□ 1.36
DDR1-228ENST00000376575 BTBD19C9JJ37 291 aa23.56■■□□□ 1.36
DDR1-228ENST00000376575 TSPY3P0CV98 308 aa23.56■■□□□ 1.36
DDR1-228ENST00000376575 TSPY8P0CW00 308 aa23.56■■□□□ 1.36
DDR1-228ENST00000376575 ICA1Q05084 483 aa23.56■■□□□ 1.36
DDR1-228ENST00000376575 ANKRD23Q86SG2 305 aa23.56■■□□□ 1.36
DDR1-228ENST00000376575 CLEC10AQ8IUN9 316 aa23.56■■□□□ 1.36
DDR1-228ENST00000376575 IL17RBQ9NRM6 502 aa23.56■■□□□ 1.36
DDR1-228ENST00000376575 TCP11L1Q9NUJ3 509 aa23.56■■□□□ 1.36
DDR1-228ENST00000376575 RNF186Q9NXI6 227 aa23.56■■□□□ 1.36
DDR1-228ENST00000376575 SAGE1Q9NXZ1 904 aa23.56■■□□□ 1.36
DDR1-228ENST00000376575 MTMR4Q9NYA4 1195 aa23.56■■□□□ 1.36
DDR1-228ENST00000376575 NYAP2Q9P242 653 aa23.56■■□□□ 1.36
DDR1-228ENST00000376575 TMX2Q9Y320 296 aa23.56■■□□□ 1.36
DDR1-228ENST00000376575 HMGCS2P54868 508 aa23.55■■□□□ 1.36
DDR1-228ENST00000376575 FAM43AQ8N2R8 423 aa23.55■■□□□ 1.36
DDR1-228ENST00000376575 MKL1Q969V6 931 aa23.55■■□□□ 1.36
DDR1-228ENST00000376575 CEP95Q96GE4 821 aa23.55■■□□□ 1.36
DDR1-228ENST00000376575 EMILIN3Q9NT22 766 aa23.55■■□□□ 1.36
DDR1-228ENST00000376575 SLC45A1Q9Y2W3 748 aa23.55■■□□□ 1.36
DDR1-228ENST00000376575 SLC27A2O14975 620 aa23.54■■□□□ 1.36
DDR1-228ENST00000376575 RANBP6O60518 1105 aaKnown RBP23.54■■□□□ 1.36
DDR1-228ENST00000376575 ALDH1A1P00352 501 aa23.54■■□□□ 1.36
DDR1-228ENST00000376575 EEF2P13639 858 aaKnown RBP23.54■■□□□ 1.36
DDR1-228ENST00000376575 USP17L2Q6R6M4 530 aa23.54■■□□□ 1.36
DDR1-228ENST00000376575 KCNB2Q92953 911 aa23.54■■□□□ 1.36
DDR1-228ENST00000376575 SYNPO2Q9UMS6 1093 aa23.54■■□□□ 1.36
DDR1-228ENST00000376575 TSPY2A6NKD2 308 aa23.53■■□□□ 1.36
DDR1-228ENST00000376575 CA12O43570 354 aa23.53■■□□□ 1.36
DDR1-228ENST00000376575 REC8O95072 547 aa23.53■■□□□ 1.36
DDR1-228ENST00000376575 USP14P54578 494 aa23.53■■□□□ 1.36
DDR1-228ENST00000376575 DGKZQ13574 1117 aa23.53■■□□□ 1.36
DDR1-228ENST00000376575 TSGA10IPQ3SY00 556 aa23.53■■□□□ 1.36
DDR1-228ENST00000376575 CREB3L3Q68CJ9 461 aa23.53■■□□□ 1.36
DDR1-228ENST00000376575 OTUD7BQ6GQQ9 843 aa23.53■■□□□ 1.36
DDR1-228ENST00000376575 STOX1Q6ZVD7 989 aa23.53■■□□□ 1.36
DDR1-228ENST00000376575 ESR2Q92731 530 aa23.53■■□□□ 1.36
DDR1-228ENST00000376575 CNNM2Q9H8M5 875 aa23.53■■□□□ 1.36
DDR1-228ENST00000376575 AGTPBP1Q9UPW5 1226 aa23.53■■□□□ 1.36
DDR1-228ENST00000376575 E7EWF7 191 aa23.52■■□□□ 1.36
DDR1-228ENST00000376575 TREML2Q5T2D2 321 aa23.52■■□□□ 1.36
DDR1-228ENST00000376575 KRT23Q9C075 422 aa23.52■■□□□ 1.36
DDR1-228ENST00000376575 ARHGEF10LQ9HCE6 1279 aa23.52■■□□□ 1.36
DDR1-228ENST00000376575 MYH4Q9Y623 1939 aa23.52■■□□□ 1.36
DDR1-228ENST00000376575 TTLL1O95922 423 aa23.51■■□□□ 1.35
DDR1-228ENST00000376575 HOXA7P31268 230 aaPredicted RBP23.51■■□□□ 1.35
DDR1-228ENST00000376575 RRP12Q5JTH9 1297 aaKnown RBP23.51■■□□□ 1.35
DDR1-228ENST00000376575 KIAA1755Q5JYT7 1200 aa23.51■■□□□ 1.35
DDR1-228ENST00000376575 ZSWIM5Q9P217 1185 aa23.51■■□□□ 1.35
DDR1-228ENST00000376575 B4E1Z4 1266 aa23.5■■□□□ 1.35
DDR1-228ENST00000376575 NMT2O60551 498 aa23.5■■□□□ 1.35
DDR1-228ENST00000376575 KDM4AO75164 1064 aa23.5■■□□□ 1.35
DDR1-228ENST00000376575 HSPA4P34932 840 aa23.5■■□□□ 1.35
DDR1-228ENST00000376575 PPP4R3BQ5MIZ7 849 aa23.5■■□□□ 1.35
DDR1-228ENST00000376575 GADL1Q6ZQY3 521 aa23.5■■□□□ 1.35
DDR1-228ENST00000376575 USP26Q9BXU7 913 aa23.5■■□□□ 1.35
DDR1-228ENST00000376575 SH2D4AQ9H788 454 aa23.5■■□□□ 1.35
DDR1-228ENST00000376575 VCPKMTQ9H867 229 aa23.5■■□□□ 1.35
DDR1-228ENST00000376575 TOMM22Q9NS69 142 aa23.5■■□□□ 1.35
DDR1-228ENST00000376575 TMOD4Q9NZQ9 345 aa23.5■■□□□ 1.35
DDR1-228ENST00000376575 PDHXO00330 501 aa23.49■■□□□ 1.35
DDR1-228ENST00000376575 TRPA1O75762 1119 aa23.49■■□□□ 1.35
DDR1-228ENST00000376575 HSPA1AP0DMV8 641 aaKnown RBP23.49■■□□□ 1.35
DDR1-228ENST00000376575 HSPA1BP0DMV9 641 aaKnown RBP23.49■■□□□ 1.35
DDR1-228ENST00000376575 RCSD1Q6JBY9 416 aa23.49■■□□□ 1.35
DDR1-228ENST00000376575 ANKS1AQ92625 1134 aa23.49■■□□□ 1.35
DDR1-228ENST00000376575 LPAR1Q92633 364 aa23.49■■□□□ 1.35
DDR1-228ENST00000376575 TTC14Q96N46 770 aa23.49■■□□□ 1.35
DDR1-228ENST00000376575 FEZ1Q99689 392 aa23.49■■□□□ 1.35
DDR1-228ENST00000376575 CLIP2Q9UDT6 1046 aa23.49■■□□□ 1.35
DDR1-228ENST00000376575 VCAM1P19320 739 aa23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms