RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 MAP3K15Q6ZN16 1313 aa16.26■□□□□ 0.19
TNFRSF1B-201ENST00000376259 WTIPA6NIX2 430 aaPredicted RBP16.26■□□□□ 0.19
TNFRSF1B-201ENST00000376259 ERVV-2B6SEH9 535 aa16.26■□□□□ 0.19
TNFRSF1B-201ENST00000376259 IKBKBO14920 756 aa16.26■□□□□ 0.19
TNFRSF1B-201ENST00000376259 TMTC2Q8N394 836 aa16.26■□□□□ 0.19
TNFRSF1B-201ENST00000376259 EPS15P42566 896 aa16.25■□□□□ 0.19
TNFRSF1B-201ENST00000376259 RAD51AP2Q09MP3 1159 aa16.25■□□□□ 0.19
TNFRSF1B-201ENST00000376259 NCAPHQ15003 741 aa16.25■□□□□ 0.19
TNFRSF1B-201ENST00000376259 A0A0U1RQJ8 604 aa16.25■□□□□ 0.19
TNFRSF1B-201ENST00000376259 KRT18P05783 430 aaKnown RBP16.25■□□□□ 0.19
TNFRSF1B-201ENST00000376259 HNRNPH2P55795 449 aaKnown RBP16.25■□□□□ 0.19
TNFRSF1B-201ENST00000376259 UBE3CQ15386 1083 aa16.25■□□□□ 0.19
TNFRSF1B-201ENST00000376259 NCAPH2Q6IBW4 605 aa16.25■□□□□ 0.19
TNFRSF1B-201ENST00000376259 NELFBQ8WX92 580 aa16.25■□□□□ 0.19
TNFRSF1B-201ENST00000376259 ATRIPQ8WXE1 791 aa16.25■□□□□ 0.19
TNFRSF1B-201ENST00000376259 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.25■□□□□ 0.19
TNFRSF1B-201ENST00000376259 PPP6R2O75170 966 aa16.25■□□□□ 0.19
TNFRSF1B-201ENST00000376259 ST5P78524 1137 aa16.25■□□□□ 0.19
TNFRSF1B-201ENST00000376259 RESP18Q5W5W9 173 aa16.25■□□□□ 0.19
TNFRSF1B-201ENST00000376259 GDAQ9Y2T3 454 aa16.25■□□□□ 0.19
TNFRSF1B-201ENST00000376259 LUC7L2Q9Y383 392 aaKnown RBP16.25■□□□□ 0.19
TNFRSF1B-201ENST00000376259 AKR1B10O60218 316 aa16.24■□□□□ 0.19
TNFRSF1B-201ENST00000376259 CASP7P55210 303 aa16.24■□□□□ 0.19
TNFRSF1B-201ENST00000376259 PIP4K2BP78356 416 aa16.24■□□□□ 0.19
TNFRSF1B-201ENST00000376259 CHRNDQ07001 517 aa16.24■□□□□ 0.19
TNFRSF1B-201ENST00000376259 SPA17Q15506 151 aa16.24■□□□□ 0.19
TNFRSF1B-201ENST00000376259 IL17RAQ96F46 866 aa16.24■□□□□ 0.19
TNFRSF1B-201ENST00000376259 TRIM49BA6NDI0 452 aa16.24■□□□□ 0.19
TNFRSF1B-201ENST00000376259 EFCAB8A8MWE9 144 aa16.24■□□□□ 0.19
TNFRSF1B-201ENST00000376259 CACNA2D4Q7Z3S7 1137 aa16.24■□□□□ 0.19
TNFRSF1B-201ENST00000376259 CRACR2BQ8N4Y2 399 aaPredicted RBP16.24■□□□□ 0.19
TNFRSF1B-201ENST00000376259 SMARCC1Q92922 1105 aaPredicted RBP16.24■□□□□ 0.19
TNFRSF1B-201ENST00000376259 MRPL44Q9H9J2 332 aaKnown RBP16.24■□□□□ 0.19
TNFRSF1B-201ENST00000376259 EPB41L4AQ9HCS5 686 aaPredicted RBP16.24■□□□□ 0.19
TNFRSF1B-201ENST00000376259 MORC2Q9Y6X9 1032 aaPredicted RBP16.24■□□□□ 0.19
TNFRSF1B-201ENST00000376259 KDM6AO15550 1401 aaPredicted RBP16.23■□□□□ 0.19
TNFRSF1B-201ENST00000376259 FMNL1O95466 1100 aaPredicted RBP16.23■□□□□ 0.19
TNFRSF1B-201ENST00000376259 LONRF2Q1L5Z9 754 aa16.23■□□□□ 0.19
TNFRSF1B-201ENST00000376259 SUSD4Q5VX71 490 aa16.23■□□□□ 0.19
TNFRSF1B-201ENST00000376259 CTR9Q6PD62 1173 aa16.23■□□□□ 0.19
TNFRSF1B-201ENST00000376259 DYMQ7RTS9 669 aa16.23■□□□□ 0.19
TNFRSF1B-201ENST00000376259 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.23■□□□□ 0.19
TNFRSF1B-201ENST00000376259 PP2D1A8MPX8 630 aa16.23■□□□□ 0.19
TNFRSF1B-201ENST00000376259 SRGAP2O75044 1071 aa16.23■□□□□ 0.19
TNFRSF1B-201ENST00000376259 IFNAR1P17181 557 aa16.23■□□□□ 0.19
TNFRSF1B-201ENST00000376259 SF3A3Q12874 501 aaKnown RBP eCLIP16.23■□□□□ 0.19
TNFRSF1B-201ENST00000376259 UBA5Q9GZZ9 404 aa16.23■□□□□ 0.19
TNFRSF1B-201ENST00000376259 RIPOR2Q9Y4F9 1068 aa16.23■□□□□ 0.19
TNFRSF1B-201ENST00000376259 CYP2D6P10635 497 aa16.23■□□□□ 0.19
TNFRSF1B-201ENST00000376259 IGDCC4Q8TDY8 1250 aa16.23■□□□□ 0.19
TNFRSF1B-201ENST00000376259 GSG1L2A8MUP6 293 aa16.22■□□□□ 0.19
TNFRSF1B-201ENST00000376259 STX10O60499 249 aa16.22■□□□□ 0.19
TNFRSF1B-201ENST00000376259 SLFN14P0C7P3 912 aa16.22■□□□□ 0.19
TNFRSF1B-201ENST00000376259 TSPY3P0CV98 308 aa16.22■□□□□ 0.19
TNFRSF1B-201ENST00000376259 TSPY8P0CW00 308 aa16.22■□□□□ 0.19
TNFRSF1B-201ENST00000376259 CYP27A1Q02318 531 aa16.22■□□□□ 0.19
TNFRSF1B-201ENST00000376259 TBC1D8BQ0IIM8 1120 aa16.22■□□□□ 0.19
TNFRSF1B-201ENST00000376259 PAK1Q13153 545 aa16.22■□□□□ 0.19
TNFRSF1B-201ENST00000376259 INF2Q27J81 1249 aa16.22■□□□□ 0.19
TNFRSF1B-201ENST00000376259 CNGA4Q8IV77 575 aa16.22■□□□□ 0.19
TNFRSF1B-201ENST00000376259 PALLDQ8WX93 1383 aa16.22■□□□□ 0.19
TNFRSF1B-201ENST00000376259 FAM182BQ5T319 152 aa16.22■□□□□ 0.19
TNFRSF1B-201ENST00000376259 TTC19Q6DKK2 380 aaPredicted RBP16.22■□□□□ 0.19
TNFRSF1B-201ENST00000376259 CTAGE1Q96RT6 745 aa16.22■□□□□ 0.19
TNFRSF1B-201ENST00000376259 NAPGQ99747 312 aaPredicted RBP16.22■□□□□ 0.19
TNFRSF1B-201ENST00000376259 TCP11L1Q9NUJ3 509 aa16.22■□□□□ 0.19
TNFRSF1B-201ENST00000376259 PLCD1P51178 756 aa16.22■□□□□ 0.19
TNFRSF1B-201ENST00000376259 DTHD1Q6ZMT9 781 aa16.22■□□□□ 0.19
TNFRSF1B-201ENST00000376259 ISCA1Q9BUE6 129 aa16.22■□□□□ 0.19
TNFRSF1B-201ENST00000376259 FAM207AQ9NSI2 230 aaPredicted RBP16.22■□□□□ 0.19
TNFRSF1B-201ENST00000376259 MPHOSPH10O00566 681 aaKnown RBP16.21■□□□□ 0.19
TNFRSF1B-201ENST00000376259 PTPREP23469 700 aa16.21■□□□□ 0.19
TNFRSF1B-201ENST00000376259 ZSCAN26Q16670 478 aa16.21■□□□□ 0.19
TNFRSF1B-201ENST00000376259 SPTY2D1Q68D10 685 aaPredicted RBP16.21■□□□□ 0.19
TNFRSF1B-201ENST00000376259 ATG3Q9NT62 314 aa16.21■□□□□ 0.19
TNFRSF1B-201ENST00000376259 TBC1D7Q9P0N9 293 aa16.21■□□□□ 0.19
TNFRSF1B-201ENST00000376259 TRIM10Q9UDY6 481 aa16.21■□□□□ 0.19
TNFRSF1B-201ENST00000376259 MEGF6O75095 1541 aa16.21■□□□□ 0.19
TNFRSF1B-201ENST00000376259 NAPAP54920 295 aa16.21■□□□□ 0.19
TNFRSF1B-201ENST00000376259 TFAP4Q01664 338 aa16.21■□□□□ 0.19
TNFRSF1B-201ENST00000376259 GSPT2Q8IYD1 628 aaKnown RBP16.21■□□□□ 0.19
TNFRSF1B-201ENST00000376259 ZSCAN10Q96SZ4 725 aaPredicted RBP16.21■□□□□ 0.19
TNFRSF1B-201ENST00000376259 CRNKL1Q9BZJ0 848 aaKnown RBP16.21■□□□□ 0.19
TNFRSF1B-201ENST00000376259 C3P01024 1663 aa16.21■□□□□ 0.19
TNFRSF1B-201ENST00000376259 H0YHG0 523 aa16.21■□□□□ 0.18
TNFRSF1B-201ENST00000376259 PSMA7O14818 248 aa16.21■□□□□ 0.18
TNFRSF1B-201ENST00000376259 PICALMQ13492 652 aa16.21■□□□□ 0.18
TNFRSF1B-201ENST00000376259 CUL4BQ13620 913 aa16.21■□□□□ 0.18
TNFRSF1B-201ENST00000376259 CSGALNACT2Q8N6G5 542 aa16.21■□□□□ 0.18
TNFRSF1B-201ENST00000376259 GPR161Q8N6U8 529 aaKnown RBP16.21■□□□□ 0.18
TNFRSF1B-201ENST00000376259 CEP112Q8N8E3 955 aa16.21■□□□□ 0.18
TNFRSF1B-201ENST00000376259 POLD4Q9HCU8 107 aa16.21■□□□□ 0.18
TNFRSF1B-201ENST00000376259 ZNF446Q9NWS9 450 aa16.21■□□□□ 0.18
TNFRSF1B-201ENST00000376259 HDAC6Q9UBN7 1215 aa16.21■□□□□ 0.18
TNFRSF1B-201ENST00000376259 SPATA1Q5VX52 437 aa16.2■□□□□ 0.18
TNFRSF1B-201ENST00000376259 NBPF5PQ86XG9 351 aaPredicted RBP16.2■□□□□ 0.18
TNFRSF1B-201ENST00000376259 PAGE5Q96GU1 130 aa16.2■□□□□ 0.18
TNFRSF1B-201ENST00000376259 EXOC1Q9NV70 894 aa16.2■□□□□ 0.18
TNFRSF1B-201ENST00000376259 WDR17Q8IZU2 1322 aa16.2■□□□□ 0.18
TNFRSF1B-201ENST00000376259 KCNJ18B7U540 433 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 180.7 ms