RNA–Protein interactions for RNA: ENST00000375446.4

NINJ1-201, Transcript of ninjurin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NINJ1, Length 1,281 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NINJ1-201ENST00000375446 NMIQ13287 307 aaPredicted RBP26■■□□□ 1.75
NINJ1-201ENST00000375446 MCMDC2Q4G0Z9 681 aa26■■□□□ 1.75
NINJ1-201ENST00000375446 ACER1Q8TDN7 264 aa26■■□□□ 1.75
NINJ1-201ENST00000375446 KIAA1683Q9H0B3 1180 aa26■■□□□ 1.75
NINJ1-201ENST00000375446 NAPBQ9H115 298 aa26■■□□□ 1.75
NINJ1-201ENST00000375446 EMILIN3Q9NT22 766 aa26■■□□□ 1.75
NINJ1-201ENST00000375446 BCRP11274 1271 aa25.99■■□□□ 1.75
NINJ1-201ENST00000375446 OSBPP22059 807 aa25.99■■□□□ 1.75
NINJ1-201ENST00000375446 KIF22Q14807 665 aa25.99■■□□□ 1.75
NINJ1-201ENST00000375446 ARHGEF6Q15052 776 aa25.99■■□□□ 1.75
NINJ1-201ENST00000375446 FBXO46Q6PJ61 603 aaPredicted RBP25.99■■□□□ 1.75
NINJ1-201ENST00000375446 LOC285556D6RIA3 1793 aa25.99■■□□□ 1.75
NINJ1-201ENST00000375446 FOXP2O15409 715 aa25.98■■□□□ 1.75
NINJ1-201ENST00000375446 USP14P54578 494 aa25.98■■□□□ 1.75
NINJ1-201ENST00000375446 ZYXQ15942 572 aaKnown RBP25.98■■□□□ 1.75
NINJ1-201ENST00000375446 STK11IPQ8N1F8 1099 aa25.98■■□□□ 1.75
NINJ1-201ENST00000375446 C12orf42Q96LP6 360 aa25.98■■□□□ 1.75
NINJ1-201ENST00000375446 ASCC2Q9H1I8 757 aaPredicted RBP25.98■■□□□ 1.75
NINJ1-201ENST00000375446 HOXA7P31268 230 aaPredicted RBP25.97■■□□□ 1.75
NINJ1-201ENST00000375446 VPS53Q5VIR6 699 aa25.97■■□□□ 1.75
NINJ1-201ENST00000375446 ARHGAP39Q9C0H5 1083 aa25.97■■□□□ 1.75
NINJ1-201ENST00000375446 MKNK2Q9HBH9 465 aa25.97■■□□□ 1.75
NINJ1-201ENST00000375446 IRX3P78415 501 aaPredicted RBP25.96■■□□□ 1.75
NINJ1-201ENST00000375446 TTC22Q5TAA0 569 aa25.96■■□□□ 1.75
NINJ1-201ENST00000375446 A0A1W2PRG0 241 aa25.95■■□□□ 1.74
NINJ1-201ENST00000375446 RASA1P20936 1047 aa25.95■■□□□ 1.74
NINJ1-201ENST00000375446 ICA1Q05084 483 aa25.95■■□□□ 1.74
NINJ1-201ENST00000375446 CLEC10AQ8IUN9 316 aa25.95■■□□□ 1.74
NINJ1-201ENST00000375446 ZNF287Q9HBT7 754 aa25.95■■□□□ 1.74
NINJ1-201ENST00000375446 DIAPH3Q9NSV4 1193 aa25.95■■□□□ 1.74
NINJ1-201ENST00000375446 HPS5Q9UPZ3 1129 aa25.95■■□□□ 1.74
NINJ1-201ENST00000375446 CCDC85CA6NKD9 419 aa25.94■■□□□ 1.74
NINJ1-201ENST00000375446 HIP1O00291 1037 aa25.94■■□□□ 1.74
NINJ1-201ENST00000375446 ECM2O94769 699 aaPredicted RBP25.94■■□□□ 1.74
NINJ1-201ENST00000375446 GSPT1P15170 499 aaKnown RBP25.94■■□□□ 1.74
NINJ1-201ENST00000375446 GCLCP48506 637 aaPredicted RBP25.94■■□□□ 1.74
NINJ1-201ENST00000375446 PPARAQ07869 468 aa25.94■■□□□ 1.74
NINJ1-201ENST00000375446 ZNF589Q86UQ0 364 aaPredicted RBP25.94■■□□□ 1.74
NINJ1-201ENST00000375446 SIAH1Q8IUQ4 282 aa25.94■■□□□ 1.74
NINJ1-201ENST00000375446 PTPN22Q9Y2R2 807 aa25.94■■□□□ 1.74
NINJ1-201ENST00000375446 CCDC171Q6TFL3 1326 aa25.93■■□□□ 1.74
NINJ1-201ENST00000375446 SLC3A2P08195 630 aaKnown RBP25.93■■□□□ 1.74
NINJ1-201ENST00000375446 PSMC4P43686 418 aa25.93■■□□□ 1.74
NINJ1-201ENST00000375446 ALX1Q15699 326 aa25.93■■□□□ 1.74
NINJ1-201ENST00000375446 ANKRD13CQ8N6S4 541 aa25.93■■□□□ 1.74
NINJ1-201ENST00000375446 KANSL2Q9H9L4 492 aa25.93■■□□□ 1.74
NINJ1-201ENST00000375446 ARHGEF10LQ9HCE6 1279 aa25.93■■□□□ 1.74
NINJ1-201ENST00000375446 PRDM1O75626 825 aa25.92■■□□□ 1.74
NINJ1-201ENST00000375446 GNRH1P01148 92 aa25.92■■□□□ 1.74
NINJ1-201ENST00000375446 VCAM1P19320 739 aa25.92■■□□□ 1.74
NINJ1-201ENST00000375446 CTGFP29279 349 aa25.92■■□□□ 1.74
NINJ1-201ENST00000375446 CWC27Q6UX04 472 aaKnown RBP25.92■■□□□ 1.74
NINJ1-201ENST00000375446 CENPQQ7L2Z9 268 aaPredicted RBP25.92■■□□□ 1.74
NINJ1-201ENST00000375446 TRIM47Q96LD4 638 aa25.92■■□□□ 1.74
NINJ1-201ENST00000375446 P2RX7Q99572 595 aaKnown RBP25.92■■□□□ 1.74
NINJ1-201ENST00000375446 GNL3Q9BVP2 549 aaKnown RBP eCLIP25.92■■□□□ 1.74
NINJ1-201ENST00000375446 USP17L15C9J2P7 530 aa25.91■■□□□ 1.74
NINJ1-201ENST00000375446 USP17L13C9JLJ4 530 aa25.91■■□□□ 1.74
NINJ1-201ENST00000375446 USP17L11C9JVI0 530 aa25.91■■□□□ 1.74
NINJ1-201ENST00000375446 USP17L18D6R9N7 530 aa25.91■■□□□ 1.74
NINJ1-201ENST00000375446 USP17L22D6RA61 530 aa25.91■■□□□ 1.74
NINJ1-201ENST00000375446 USP17L17D6RBQ6 530 aa25.91■■□□□ 1.74
NINJ1-201ENST00000375446 USP17L19D6RCP7 530 aa25.91■■□□□ 1.74
NINJ1-201ENST00000375446 USP17L20D6RJB6 530 aa25.91■■□□□ 1.74
NINJ1-201ENST00000375446 FMNL1O95466 1100 aaPredicted RBP25.91■■□□□ 1.74
NINJ1-201ENST00000375446 HSPD1P10809 573 aaKnown RBP25.91■■□□□ 1.74
NINJ1-201ENST00000375446 MFAP1P55081 439 aaKnown RBP25.91■■□□□ 1.74
NINJ1-201ENST00000375446 PDE4BQ07343 736 aa25.91■■□□□ 1.74
NINJ1-201ENST00000375446 USP17L24Q0WX57 530 aa25.91■■□□□ 1.74
NINJ1-201ENST00000375446 FAM110CQ1W6H9 321 aa25.91■■□□□ 1.74
NINJ1-201ENST00000375446 ZNF444Q8N0Y2 327 aaPredicted RBP25.91■■□□□ 1.74
NINJ1-201ENST00000375446 SH2D4AQ9H788 454 aa25.91■■□□□ 1.74
NINJ1-201ENST00000375446 TMX2Q9Y320 296 aa25.91■■□□□ 1.74
NINJ1-201ENST00000375446 EEF2P13639 858 aaKnown RBP25.9■■□□□ 1.74
NINJ1-201ENST00000375446 FCGRTP55899 365 aa25.9■■□□□ 1.74
NINJ1-201ENST00000375446 HERVK_113P62684 666 aa25.9■■□□□ 1.74
NINJ1-201ENST00000375446 FGAP02671 866 aa25.89■■□□□ 1.74
NINJ1-201ENST00000375446 ATP2B2Q01814 1243 aa25.89■■□□□ 1.74
NINJ1-201ENST00000375446 CATSPERGQ6ZRH7 1159 aa25.89■■□□□ 1.74
NINJ1-201ENST00000375446 RPAP3Q9H6T3 665 aaPredicted RBP25.89■■□□□ 1.74
NINJ1-201ENST00000375446 ANAPC4Q9UJX5 808 aa25.89■■□□□ 1.74
NINJ1-201ENST00000375446 MYH8P13535 1937 aa25.88■■□□□ 1.73
NINJ1-201ENST00000375446 HOXD10P28358 340 aa25.88■■□□□ 1.73
NINJ1-201ENST00000375446 PRMT2P55345 433 aa25.88■■□□□ 1.73
NINJ1-201ENST00000375446 CTDSPL2Q05D32 466 aa25.88■■□□□ 1.73
NINJ1-201ENST00000375446 VCPKMTQ9H867 229 aa25.88■■□□□ 1.73
NINJ1-201ENST00000375446 MORF4L1Q9UBU8 362 aa25.88■■□□□ 1.73
NINJ1-201ENST00000375446 KIAA1755Q5JYT7 1200 aa25.87■■□□□ 1.73
NINJ1-201ENST00000375446 GTF3C2Q8WUA4 911 aaPredicted RBP25.87■■□□□ 1.73
NINJ1-201ENST00000375446 LPAR1Q92633 364 aa25.87■■□□□ 1.73
NINJ1-201ENST00000375446 SRRDQ9UH36 339 aa25.87■■□□□ 1.73
NINJ1-201ENST00000375446 DDX52Q9Y2R4 599 aaKnown RBP eCLIP25.87■■□□□ 1.73
NINJ1-201ENST00000375446 PTCH2Q9Y6C5 1203 aa25.87■■□□□ 1.73
NINJ1-201ENST00000375446 ZMYM6O95789 1325 aa25.87■■□□□ 1.73
NINJ1-201ENST00000375446 NEFLP07196 543 aa25.86■■□□□ 1.73
NINJ1-201ENST00000375446 ZSWIM8A7E2V4 1837 aa25.86■■□□□ 1.73
NINJ1-201ENST00000375446 IGKV6D-41A0A0C4DH26 115 aa25.85■■□□□ 1.73
NINJ1-201ENST00000375446 SPICE1Q8N0Z3 855 aa25.85■■□□□ 1.73
NINJ1-201ENST00000375446 NEDD1Q8NHV4 660 aa25.85■■□□□ 1.73
NINJ1-201ENST00000375446 TXNRD2Q9NNW7 524 aa25.85■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms