RNA–Protein interactions for RNA: ENST00000374879.4

TMEFF1-201, Transcript of transmembrane protein with EGF like and two follistatin like domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEFF1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1-201ENST00000374879 LMTK3Q96Q04 1460 aa23.19■■□□□ 1.3
TMEFF1-201ENST00000374879 FECHP22830 423 aa23.19■■□□□ 1.3
TMEFF1-201ENST00000374879 NT5DC1Q5TFE4 455 aa23.19■■□□□ 1.3
TMEFF1-201ENST00000374879 SLC24A3Q9HC58 644 aa23.19■■□□□ 1.3
TMEFF1-201ENST00000374879 SEC31BQ9NQW1 1179 aa23.19■■□□□ 1.3
TMEFF1-201ENST00000374879 RNF225M0QZC1 329 aaPredicted RBP23.18■■□□□ 1.3
TMEFF1-201ENST00000374879 PHKG2P15735 406 aa23.18■■□□□ 1.3
TMEFF1-201ENST00000374879 PIP4K2AP48426 406 aaPredicted RBP23.18■■□□□ 1.3
TMEFF1-201ENST00000374879 TTC39AQ5SRH9 613 aa23.18■■□□□ 1.3
TMEFF1-201ENST00000374879 IQCA1Q86XH1 822 aa23.18■■□□□ 1.3
TMEFF1-201ENST00000374879 KBTBD3Q8NAB2 608 aa23.18■■□□□ 1.3
TMEFF1-201ENST00000374879 SERTAD1Q9UHV2 236 aa23.18■■□□□ 1.3
TMEFF1-201ENST00000374879 PLCD1P51178 756 aa23.18■■□□□ 1.3
TMEFF1-201ENST00000374879 STX17P56962 302 aa23.18■■□□□ 1.3
TMEFF1-201ENST00000374879 WLSQ5T9L3 541 aa23.18■■□□□ 1.3
TMEFF1-201ENST00000374879 PROSER2Q86WR7 435 aaPredicted RBP23.18■■□□□ 1.3
TMEFF1-201ENST00000374879 RRP36Q96EU6 259 aaKnown RBP23.18■■□□□ 1.3
TMEFF1-201ENST00000374879 SAR1BQ9Y6B6 198 aa23.18■■□□□ 1.3
TMEFF1-201ENST00000374879 GOLGA8KD6RF30 607 aa23.17■■□□□ 1.3
TMEFF1-201ENST00000374879 HSP90AB3PQ58FF7 597 aa23.17■■□□□ 1.3
TMEFF1-201ENST00000374879 ANKRD13DQ6ZTN6 518 aa23.17■■□□□ 1.3
TMEFF1-201ENST00000374879 TBC1D22AQ8WUA7 517 aa23.17■■□□□ 1.3
TMEFF1-201ENST00000374879 CENPHQ9H3R5 247 aa23.17■■□□□ 1.3
TMEFF1-201ENST00000374879 ZMYM6O95789 1325 aa23.17■■□□□ 1.3
TMEFF1-201ENST00000374879 TATP17735 454 aaPredicted RBP23.17■■□□□ 1.3
TMEFF1-201ENST00000374879 CDC25AP30304 524 aa23.17■■□□□ 1.3
TMEFF1-201ENST00000374879 SND1Q7KZF4 910 aaKnown RBP eCLIP23.17■■□□□ 1.3
TMEFF1-201ENST00000374879 ARL8AQ96BM9 186 aa23.17■■□□□ 1.3
TMEFF1-201ENST00000374879 CCDC51Q96ER9 411 aa23.17■■□□□ 1.3
TMEFF1-201ENST00000374879 POLR2DO15514 142 aaKnown RBP23.16■■□□□ 1.3
TMEFF1-201ENST00000374879 KLHL10Q6JEL2 608 aa23.16■■□□□ 1.3
TMEFF1-201ENST00000374879 FBXL16Q8N461 479 aa23.16■■□□□ 1.3
TMEFF1-201ENST00000374879 RNF217Q8TC41 542 aa23.16■■□□□ 1.3
TMEFF1-201ENST00000374879 AENQ8WTP8 325 aaKnown RBP23.16■■□□□ 1.3
TMEFF1-201ENST00000374879 EIF4ENIF1Q9NRA8 985 aaKnown RBP23.16■■□□□ 1.3
TMEFF1-201ENST00000374879 NAIF1Q69YI7 327 aaPredicted RBP23.16■■□□□ 1.3
TMEFF1-201ENST00000374879 TEX11Q8IYF3 940 aa23.16■■□□□ 1.3
TMEFF1-201ENST00000374879 ABHD10Q9NUJ1 306 aa23.16■■□□□ 1.3
TMEFF1-201ENST00000374879 SKOR1P84550 965 aa23.15■■□□□ 1.3
TMEFF1-201ENST00000374879 GRIN1Q05586 938 aa23.15■■□□□ 1.3
TMEFF1-201ENST00000374879 TTMPQ5BVD1 217 aa23.15■■□□□ 1.3
TMEFF1-201ENST00000374879 ELOA2Q8IYF1 753 aaPredicted RBP23.15■■□□□ 1.3
TMEFF1-201ENST00000374879 ALG1Q9BT22 464 aa23.15■■□□□ 1.3
TMEFF1-201ENST00000374879 HELLSQ9NRZ9 838 aa23.15■■□□□ 1.3
TMEFF1-201ENST00000374879 FAM184BQ9ULE4 1060 aa23.15■■□□□ 1.3
TMEFF1-201ENST00000374879 TFR2Q9UP52 801 aa23.15■■□□□ 1.3
TMEFF1-201ENST00000374879 REXO2Q9Y3B8 237 aaKnown RBP23.15■■□□□ 1.3
TMEFF1-201ENST00000374879 C1orf167Q5SNV9 1468 aa23.15■■□□□ 1.3
TMEFF1-201ENST00000374879 PALLDQ8WX93 1383 aa23.15■■□□□ 1.3
TMEFF1-201ENST00000374879 GOLIM4O00461 696 aa23.15■■□□□ 1.3
TMEFF1-201ENST00000374879 PSMD14O00487 310 aa23.15■■□□□ 1.3
TMEFF1-201ENST00000374879 RASSF9O75901 435 aa23.15■■□□□ 1.3
TMEFF1-201ENST00000374879 CCDC40Q4G0X9 1142 aa23.15■■□□□ 1.3
TMEFF1-201ENST00000374879 RNF187Q5TA31 235 aaPredicted RBP23.15■■□□□ 1.3
TMEFF1-201ENST00000374879 KRT40Q6A162 431 aa23.15■■□□□ 1.3
TMEFF1-201ENST00000374879 CYP26C1Q6V0L0 522 aa23.15■■□□□ 1.3
TMEFF1-201ENST00000374879 SCN11AQ9UI33 1791 aa23.15■■□□□ 1.3
TMEFF1-201ENST00000374879 MRC1P22897 1456 aa23.15■■□□□ 1.3
TMEFF1-201ENST00000374879 ERCC5P28715 1186 aaPredicted RBP23.14■■□□□ 1.3
TMEFF1-201ENST00000374879 SMTNP53814 917 aa23.14■■□□□ 1.3
TMEFF1-201ENST00000374879 HAND2P61296 217 aa23.14■■□□□ 1.3
TMEFF1-201ENST00000374879 POLD4Q9HCU8 107 aa23.14■■□□□ 1.3
TMEFF1-201ENST00000374879 PRC1O43663 620 aa23.14■■□□□ 1.29
TMEFF1-201ENST00000374879 ZEB2O60315 1214 aa23.14■■□□□ 1.29
TMEFF1-201ENST00000374879 ATP1A2P50993 1020 aa23.14■■□□□ 1.29
TMEFF1-201ENST00000374879 CEP85LQ5SZL2 805 aa23.14■■□□□ 1.29
TMEFF1-201ENST00000374879 SPATA1Q5VX52 437 aa23.14■■□□□ 1.29
TMEFF1-201ENST00000374879 SPATS2Q86XZ4 545 aaKnown RBP23.14■■□□□ 1.29
TMEFF1-201ENST00000374879 TTC5Q8N0Z6 440 aa23.14■■□□□ 1.29
TMEFF1-201ENST00000374879 VCPKMTQ9H867 229 aa23.14■■□□□ 1.29
TMEFF1-201ENST00000374879 COPRSQ9NQ92 184 aa23.14■■□□□ 1.29
TMEFF1-201ENST00000374879 IFNL2Q8IZJ0 200 aa23.13■■□□□ 1.29
TMEFF1-201ENST00000374879 KRI1Q8N9T8 703 aaKnown RBP23.13■■□□□ 1.29
TMEFF1-201ENST00000374879 CHP1Q99653 195 aa23.13■■□□□ 1.29
TMEFF1-201ENST00000374879 PDE2AO00408 941 aaPredicted RBP23.13■■□□□ 1.29
TMEFF1-201ENST00000374879 ZNF185O15231 689 aa23.13■■□□□ 1.29
TMEFF1-201ENST00000374879 SNRPA1P09661 255 aaKnown RBP23.13■■□□□ 1.29
TMEFF1-201ENST00000374879 NAP1L1P55209 391 aaKnown RBP23.13■■□□□ 1.29
TMEFF1-201ENST00000374879 UBE3BQ7Z3V4 1068 aa23.13■■□□□ 1.29
TMEFF1-201ENST00000374879 LRP10Q7Z4F1 713 aa23.13■■□□□ 1.29
TMEFF1-201ENST00000374879 DDX20Q9UHI6 824 aaKnown RBP23.13■■□□□ 1.29
TMEFF1-201ENST00000374879 MEGF6O75095 1541 aa23.13■■□□□ 1.29
TMEFF1-201ENST00000374879 CSB-PGBD3P0DP91 1061 aa23.12■■□□□ 1.29
TMEFF1-201ENST00000374879 MRPL12P52815 198 aaKnown RBP23.12■■□□□ 1.29
TMEFF1-201ENST00000374879 PTPN12Q05209 780 aaKnown RBP23.12■■□□□ 1.29
TMEFF1-201ENST00000374879 C2orf54Q08AI8 447 aa23.12■■□□□ 1.29
TMEFF1-201ENST00000374879 FILIP1LQ4L180 1135 aa23.12■■□□□ 1.29
TMEFF1-201ENST00000374879 PAPD7Q5XG87 772 aaKnown RBP23.12■■□□□ 1.29
TMEFF1-201ENST00000374879 CEP57Q86XR8 500 aa23.12■■□□□ 1.29
TMEFF1-201ENST00000374879 CCDC13Q8IYE1 715 aa23.12■■□□□ 1.29
TMEFF1-201ENST00000374879 TRIML1Q8N9V2 468 aa23.12■■□□□ 1.29
TMEFF1-201ENST00000374879 OPA1O60313 960 aa23.12■■□□□ 1.29
TMEFF1-201ENST00000374879 CD44P16070 742 aaKnown RBP23.12■■□□□ 1.29
TMEFF1-201ENST00000374879 CCT6AP40227 531 aaKnown RBP23.12■■□□□ 1.29
TMEFF1-201ENST00000374879 NAA35Q5VZE5 725 aa23.12■■□□□ 1.29
TMEFF1-201ENST00000374879 YTHDF3Q7Z739 585 aaKnown RBP23.12■■□□□ 1.29
TMEFF1-201ENST00000374879 SH2D3CQ8N5H7 860 aa23.12■■□□□ 1.29
TMEFF1-201ENST00000374879 RPGRIP1Q96KN7 1286 aa23.12■■□□□ 1.29
TMEFF1-201ENST00000374879 NUP88Q99567 741 aaPredicted RBP23.12■■□□□ 1.29
TMEFF1-201ENST00000374879 SLC40A1Q9NP59 571 aa23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms