RNA–Protein interactions for RNA: ENST00000372736.3

COL9A2-201, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 3

Gene COL9A2, Length 319 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-201ENST00000372736 SEC62Q99442 399 aaKnown RBP27.2■■□□□ 1.94
COL9A2-201ENST00000372736 FEZ1Q99689 392 aa27.2■■□□□ 1.94
COL9A2-201ENST00000372736 KIAA1683Q9H0B3 1180 aa27.2■■□□□ 1.94
COL9A2-201ENST00000372736 MPHOSPH10O00566 681 aaKnown RBP27.19■■□□□ 1.94
COL9A2-201ENST00000372736 CDK8P49336 464 aa27.19■■□□□ 1.94
COL9A2-201ENST00000372736 IRX6P78412 446 aaPredicted RBP27.19■■□□□ 1.94
COL9A2-201ENST00000372736 NUCB1Q02818 461 aa27.19■■□□□ 1.94
COL9A2-201ENST00000372736 CHD1LQ86WJ1 897 aa27.19■■□□□ 1.94
COL9A2-201ENST00000372736 SRRDQ9UH36 339 aa27.19■■□□□ 1.94
COL9A2-201ENST00000372736 RBBP6Q7Z6E9 1792 aaKnown RBP27.19■■□□□ 1.94
COL9A2-201ENST00000372736 FMNL1O95466 1100 aaPredicted RBP27.18■■□□□ 1.94
COL9A2-201ENST00000372736 GNAT2P19087 354 aa27.18■■□□□ 1.94
COL9A2-201ENST00000372736 GCLCP48506 637 aaPredicted RBP27.18■■□□□ 1.94
COL9A2-201ENST00000372736 PRMT2P55345 433 aa27.18■■□□□ 1.94
COL9A2-201ENST00000372736 FCGRTP55899 365 aa27.18■■□□□ 1.94
COL9A2-201ENST00000372736 IRX3P78415 501 aaPredicted RBP27.18■■□□□ 1.94
COL9A2-201ENST00000372736 ZYXQ15942 572 aaKnown RBP27.18■■□□□ 1.94
COL9A2-201ENST00000372736 SBK1Q52WX2 424 aa27.18■■□□□ 1.94
COL9A2-201ENST00000372736 EVI5LQ96CN4 794 aa27.18■■□□□ 1.94
COL9A2-201ENST00000372736 ROBO3Q96MS0 1386 aa27.18■■□□□ 1.94
COL9A2-201ENST00000372736 GREB1LQ9C091 1923 aaPredicted RBP27.18■■□□□ 1.94
COL9A2-201ENST00000372736 AKR1B1P15121 316 aa27.17■■□□□ 1.94
COL9A2-201ENST00000372736 TMEM179Q6ZVK1 233 aa27.17■■□□□ 1.94
COL9A2-201ENST00000372736 USP14P54578 494 aa27.16■■□□□ 1.94
COL9A2-201ENST00000372736 SLC9C1Q4G0N8 1177 aa27.16■■□□□ 1.94
COL9A2-201ENST00000372736 MYPNQ86TC9 1320 aa27.16■■□□□ 1.94
COL9A2-201ENST00000372736 A0A1W2PRG0 241 aa27.15■■□□□ 1.94
COL9A2-201ENST00000372736 VCAM1P19320 739 aa27.15■■□□□ 1.94
COL9A2-201ENST00000372736 CLEC10AQ8IUN9 316 aa27.15■■□□□ 1.94
COL9A2-201ENST00000372736 ZNF333Q96JL9 665 aa27.15■■□□□ 1.94
COL9A2-201ENST00000372736 CCDC17Q96LX7 622 aa27.15■■□□□ 1.94
COL9A2-201ENST00000372736 P2RX7Q99572 595 aaKnown RBP27.15■■□□□ 1.94
COL9A2-201ENST00000372736 DOCK3Q8IZD9 2030 aa27.14■■□□□ 1.94
COL9A2-201ENST00000372736 HOXD10P28358 340 aa27.14■■□□□ 1.94
COL9A2-201ENST00000372736 HERVK_113P62684 666 aa27.14■■□□□ 1.94
COL9A2-201ENST00000372736 PRKCZQ05513 592 aa27.14■■□□□ 1.94
COL9A2-201ENST00000372736 MORF4L1Q9UBU8 362 aa27.14■■□□□ 1.94
COL9A2-201ENST00000372736 PATL2C9JE40 543 aaKnown RBP27.13■■□□□ 1.93
COL9A2-201ENST00000372736 TDO2P48775 406 aa27.13■■□□□ 1.93
COL9A2-201ENST00000372736 PLEKHM2Q8IWE5 1019 aa27.13■■□□□ 1.93
COL9A2-201ENST00000372736 KIAA0100Q14667 2235 aaKnown RBP27.13■■□□□ 1.93
COL9A2-201ENST00000372736 APPP05067 770 aa27.12■■□□□ 1.93
COL9A2-201ENST00000372736 MLLT1Q03111 559 aaPredicted RBP27.12■■□□□ 1.93
COL9A2-201ENST00000372736 ICA1Q05084 483 aa27.12■■□□□ 1.93
COL9A2-201ENST00000372736 SIAH1Q8IUQ4 282 aa27.12■■□□□ 1.93
COL9A2-201ENST00000372736 IFNL3Q8IZI9 196 aa27.12■■□□□ 1.93
COL9A2-201ENST00000372736 SH3TC2Q8TF17 1288 aa27.12■■□□□ 1.93
COL9A2-201ENST00000372736 OSBPL3Q9H4L5 887 aa27.12■■□□□ 1.93
COL9A2-201ENST00000372736 TXNRD2Q9NNW7 524 aa27.12■■□□□ 1.93
COL9A2-201ENST00000372736 GABRQQ9UN88 632 aa27.12■■□□□ 1.93
COL9A2-201ENST00000372736 TNRC18O15417 2968 aaPredicted RBP27.12■■□□□ 1.93
COL9A2-201ENST00000372736 BRCA2P51587 3418 aa27.12■■□□□ 1.93
COL9A2-201ENST00000372736 MINDY4BA8MYZ0 360 aa27.11■■□□□ 1.93
COL9A2-201ENST00000372736 USP17L15C9J2P7 530 aa27.11■■□□□ 1.93
COL9A2-201ENST00000372736 USP17L13C9JLJ4 530 aa27.11■■□□□ 1.93
COL9A2-201ENST00000372736 USP17L11C9JVI0 530 aa27.11■■□□□ 1.93
COL9A2-201ENST00000372736 USP17L18D6R9N7 530 aa27.11■■□□□ 1.93
COL9A2-201ENST00000372736 USP17L22D6RA61 530 aa27.11■■□□□ 1.93
COL9A2-201ENST00000372736 USP17L17D6RBQ6 530 aa27.11■■□□□ 1.93
COL9A2-201ENST00000372736 USP17L19D6RCP7 530 aa27.11■■□□□ 1.93
COL9A2-201ENST00000372736 USP17L20D6RJB6 530 aa27.11■■□□□ 1.93
COL9A2-201ENST00000372736 TNPO2O14787 897 aaKnown RBP27.11■■□□□ 1.93
COL9A2-201ENST00000372736 FOXP2O15409 715 aa27.11■■□□□ 1.93
COL9A2-201ENST00000372736 USP17L24Q0WX57 530 aa27.11■■□□□ 1.93
COL9A2-201ENST00000372736 POTEEQ6S8J3 1075 aa27.11■■□□□ 1.93
COL9A2-201ENST00000372736 CCDC129Q6ZRS4 1044 aa27.11■■□□□ 1.93
COL9A2-201ENST00000372736 PEX10O60683 326 aa27.1■■□□□ 1.93
COL9A2-201ENST00000372736 RASA1P20936 1047 aa27.1■■□□□ 1.93
COL9A2-201ENST00000372736 NBPF11Q86T75 865 aa27.1■■□□□ 1.93
COL9A2-201ENST00000372736 RAET1EQ8TD07 263 aa27.1■■□□□ 1.93
COL9A2-201ENST00000372736 CATSPERGQ6ZRH7 1159 aa27.09■■□□□ 1.93
COL9A2-201ENST00000372736 TICAM2Q86XR7 235 aa27.09■■□□□ 1.93
COL9A2-201ENST00000372736 GTF3C2Q8WUA4 911 aaPredicted RBP27.09■■□□□ 1.93
COL9A2-201ENST00000372736 GNL3Q9BVP2 549 aaKnown RBP eCLIP27.09■■□□□ 1.93
COL9A2-201ENST00000372736 NACAP1Q9BZK3 213 aa27.09■■□□□ 1.93
COL9A2-201ENST00000372736 RPAP3Q9H6T3 665 aaPredicted RBP27.09■■□□□ 1.93
COL9A2-201ENST00000372736 RBPJLQ9UBG7 517 aa27.09■■□□□ 1.93
COL9A2-201ENST00000372736 RLFQ13129 1914 aa27.09■■□□□ 1.93
COL9A2-201ENST00000372736 PLXNB2O15031 1838 aa27.09■■□□□ 1.93
COL9A2-201ENST00000372736 A0A0D9SFI3 127 aa27.08■■□□□ 1.93
COL9A2-201ENST00000372736 POTEFA5A3E0 1075 aa27.08■■□□□ 1.93
COL9A2-201ENST00000372736 KIAA1755Q5JYT7 1200 aa27.08■■□□□ 1.93
COL9A2-201ENST00000372736 STK11IPQ8N1F8 1099 aa27.08■■□□□ 1.93
COL9A2-201ENST00000372736 FAM227BQ96M60 508 aa27.08■■□□□ 1.93
COL9A2-201ENST00000372736 ARHGEF10LQ9HCE6 1279 aa27.08■■□□□ 1.93
COL9A2-201ENST00000372736 TMX2Q9Y320 296 aa27.08■■□□□ 1.93
COL9A2-201ENST00000372736 A0A0G2JMZ2 1700 aa27.07■■□□□ 1.92
COL9A2-201ENST00000372736 PARP14Q460N5 1801 aa27.07■■□□□ 1.92
COL9A2-201ENST00000372736 TRIM6-TRIM34B2RNG4 842 aa27.07■■□□□ 1.92
COL9A2-201ENST00000372736 FLT3LGP49771 235 aa27.07■■□□□ 1.92
COL9A2-201ENST00000372736 COA7Q96BR5 231 aa27.07■■□□□ 1.92
COL9A2-201ENST00000372736 NAPBQ9H115 298 aa27.07■■□□□ 1.92
COL9A2-201ENST00000372736 HELLSQ9NRZ9 838 aa27.07■■□□□ 1.92
COL9A2-201ENST00000372736 GRK4P32298 578 aa27.06■■□□□ 1.92
COL9A2-201ENST00000372736 GPRC5AQ8NFJ5 357 aa27.06■■□□□ 1.92
COL9A2-201ENST00000372736 SH2D4AQ9H788 454 aa27.06■■□□□ 1.92
COL9A2-201ENST00000372736 KANSL2Q9H9L4 492 aa27.06■■□□□ 1.92
COL9A2-201ENST00000372736 CNMDO75829 334 aa27.05■■□□□ 1.92
COL9A2-201ENST00000372736 EEF2P13639 858 aaKnown RBP27.05■■□□□ 1.92
COL9A2-201ENST00000372736 ERVK-9P63128 1117 aa27.05■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms