RNA–Protein interactions for RNA: ENST00000371834.6

BRD3-202, Transcript of bromodomain containing 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene BRD3, Length 2,529 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3-202ENST00000371834 CTR9Q6PD62 1173 aa26.1■■□□□ 1.77
BRD3-202ENST00000371834 PRPF3O43395 683 aaKnown RBP26.09■■□□□ 1.77
BRD3-202ENST00000371834 XBP1P17861 261 aa26.09■■□□□ 1.77
BRD3-202ENST00000371834 TROAPQ12815 778 aa26.09■■□□□ 1.77
BRD3-202ENST00000371834 ERCC6LQ2NKX8 1250 aa26.09■■□□□ 1.77
BRD3-202ENST00000371834 BSDC1Q9NW68 430 aaPredicted RBP26.09■■□□□ 1.77
BRD3-202ENST00000371834 USP17L12C9JPN9 530 aa26.09■■□□□ 1.77
BRD3-202ENST00000371834 USP17L21D6R901 530 aa26.09■■□□□ 1.77
BRD3-202ENST00000371834 ADKP55263 362 aaKnown RBP26.09■■□□□ 1.77
BRD3-202ENST00000371834 PPP2R5BQ15173 497 aa26.09■■□□□ 1.77
BRD3-202ENST00000371834 BRIP1Q9BX63 1249 aa26.09■■□□□ 1.77
BRD3-202ENST00000371834 DACH1Q9UI36 760 aa26.09■■□□□ 1.77
BRD3-202ENST00000371834 NMT2O60551 498 aa26.08■■□□□ 1.77
BRD3-202ENST00000371834 DMTNQ08495 405 aa26.08■■□□□ 1.77
BRD3-202ENST00000371834 SPATA20Q8TB22 786 aa26.08■■□□□ 1.77
BRD3-202ENST00000371834 AATFQ9NY61 560 aaKnown RBP eCLIP26.08■■□□□ 1.77
BRD3-202ENST00000371834 CCP110O43303 1012 aa26.08■■□□□ 1.76
BRD3-202ENST00000371834 SF3B3Q15393 1217 aaKnown RBP26.08■■□□□ 1.76
BRD3-202ENST00000371834 KANK3Q6NY19 840 aa26.08■■□□□ 1.76
BRD3-202ENST00000371834 IQCA1Q86XH1 822 aa26.08■■□□□ 1.76
BRD3-202ENST00000371834 TRIML1Q8N9V2 468 aa26.08■■□□□ 1.76
BRD3-202ENST00000371834 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP26.08■■□□□ 1.768e-7■■■□□ 16.1
BRD3-202ENST00000371834 ROBO1Q9Y6N7 1651 aa26.08■■□□□ 1.76
BRD3-202ENST00000371834 ZNF174Q15697 407 aa26.07■■□□□ 1.76
BRD3-202ENST00000371834 SYMPKQ92797 1274 aaKnown RBP26.07■■□□□ 1.76
BRD3-202ENST00000371834 PLCD1P51178 756 aa26.07■■□□□ 1.76
BRD3-202ENST00000371834 NPY5RQ15761 445 aa26.06■■□□□ 1.76
BRD3-202ENST00000371834 SPECC1LQ69YQ0 1117 aa26.06■■□□□ 1.76
BRD3-202ENST00000371834 FAM177A1Q8N128 213 aaPredicted RBP26.06■■□□□ 1.76
BRD3-202ENST00000371834 TC2NQ8N9U0 490 aa26.06■■□□□ 1.76
BRD3-202ENST00000371834 BAG1Q99933 345 aaPredicted RBP26.06■■□□□ 1.76
BRD3-202ENST00000371834 A0A1B0GUL6 1792 aa26.06■■□□□ 1.76
BRD3-202ENST00000371834 KLHL10Q6JEL2 608 aa26.06■■□□□ 1.76
BRD3-202ENST00000371834 PPP2R2CQ9Y2T4 447 aa26.06■■□□□ 1.76
BRD3-202ENST00000371834 PHLPP2Q6ZVD8 1323 aa26.05■■□□□ 1.76
BRD3-202ENST00000371834 ARHGAP6O43182 974 aa26.05■■□□□ 1.76
BRD3-202ENST00000371834 FAM47AQ5JRC9 791 aa26.05■■□□□ 1.76
BRD3-202ENST00000371834 TMTC3Q6ZXV5 915 aa26.05■■□□□ 1.76
BRD3-202ENST00000371834 NUTM2AQ8IVF1 878 aaPredicted RBP26.05■■□□□ 1.76
BRD3-202ENST00000371834 LINC00116Q8NCU8 138 aa26.05■■□□□ 1.76
BRD3-202ENST00000371834 PAGE5Q96GU1 130 aa26.05■■□□□ 1.76
BRD3-202ENST00000371834 PKNOX2Q96KN3 472 aa26.05■■□□□ 1.76
BRD3-202ENST00000371834 RBM28Q9NW13 759 aaKnown RBP26.05■■□□□ 1.76
BRD3-202ENST00000371834 THRAP3Q9Y2W1 955 aaKnown RBP26.05■■□□□ 1.76
BRD3-202ENST00000371834 VWA3AA6NCI4 1184 aa26.05■■□□□ 1.76
BRD3-202ENST00000371834 TUBB4AP04350 444 aa26.05■■□□□ 1.76
BRD3-202ENST00000371834 FGRP09769 529 aa26.05■■□□□ 1.76
BRD3-202ENST00000371834 CD44P16070 742 aaKnown RBP26.05■■□□□ 1.76
BRD3-202ENST00000371834 STX17P56962 302 aa26.05■■□□□ 1.76
BRD3-202ENST00000371834 SRBD1Q8N5C6 995 aaKnown RBP26.05■■□□□ 1.76
BRD3-202ENST00000371834 NSUN4Q96CB9 384 aaKnown RBP26.05■■□□□ 1.76
BRD3-202ENST00000371834 COL22A1Q8NFW1 1626 aaPredicted RBP26.04■■□□□ 1.76
BRD3-202ENST00000371834 GTF2E1P29083 439 aaPredicted RBP26.04■■□□□ 1.76
BRD3-202ENST00000371834 MECOMQ03112 1051 aa26.04■■□□□ 1.76
BRD3-202ENST00000371834 CLEC4GQ6UXB4 293 aa26.04■■□□□ 1.76
BRD3-202ENST00000371834 SMYD4Q8IYR2 804 aaPredicted RBP26.04■■□□□ 1.76
BRD3-202ENST00000371834 TNFRSF25Q93038 417 aa26.04■■□□□ 1.76
BRD3-202ENST00000371834 TFCP2L1Q9NZI6 479 aa26.04■■□□□ 1.76
BRD3-202ENST00000371834 CYP2D6P10635 497 aa26.04■■□□□ 1.76
BRD3-202ENST00000371834 TOGARAM2Q6ZUX3 1019 aa26.04■■□□□ 1.76
BRD3-202ENST00000371834 MORC2Q9Y6X9 1032 aaPredicted RBP26.04■■□□□ 1.76
BRD3-202ENST00000371834 BAZ2BQ9UIF8 2168 aaKnown RBP26.03■■□□□ 1.76
BRD3-202ENST00000371834 IGSF3O75054 1194 aa26.03■■□□□ 1.76
BRD3-202ENST00000371834 SLFN14P0C7P3 912 aa26.03■■□□□ 1.76
BRD3-202ENST00000371834 VEGFAP15692 232 aaPredicted RBP26.03■■□□□ 1.76
BRD3-202ENST00000371834 STAMQ92783 540 aa26.03■■□□□ 1.76
BRD3-202ENST00000371834 CNTNAP5Q8WYK1 1306 aa26.03■■□□□ 1.76
BRD3-202ENST00000371834 NR1I3Q14994 352 aa26.03■■□□□ 1.76
BRD3-202ENST00000371834 SH3RF1Q7Z6J0 888 aa26.03■■□□□ 1.76
BRD3-202ENST00000371834 FBXO33Q7Z6M2 555 aa26.03■■□□□ 1.76
BRD3-202ENST00000371834 FCHSD1Q86WN1 690 aa26.03■■□□□ 1.76
BRD3-202ENST00000371834 JAG2Q9Y219 1238 aa26.03■■□□□ 1.76
BRD3-202ENST00000371834 DDX52Q9Y2R4 599 aaKnown RBP eCLIP26.03■■□□□ 1.76
BRD3-202ENST00000371834 ADAMTS3O15072 1205 aa26.02■■□□□ 1.76
BRD3-202ENST00000371834 ZSCAN12O43309 604 aa26.02■■□□□ 1.76
BRD3-202ENST00000371834 URI1O94763 535 aaPredicted RBP26.02■■□□□ 1.76
BRD3-202ENST00000371834 ERCC5P28715 1186 aaPredicted RBP26.02■■□□□ 1.76
BRD3-202ENST00000371834 SLC4A8Q2Y0W8 1093 aa26.02■■□□□ 1.76
BRD3-202ENST00000371834 TBC1D9BQ66K14 1250 aa26.02■■□□□ 1.76
BRD3-202ENST00000371834 CCDC24Q8N4L8 307 aa26.02■■□□□ 1.76
BRD3-202ENST00000371834 NOL10Q9BSC4 688 aaKnown RBP26.02■■□□□ 1.76
BRD3-202ENST00000371834 SCN7AQ01118 1682 aa26.02■■□□□ 1.76
BRD3-202ENST00000371834 TEX33O43247 280 aa26.02■■□□□ 1.76
BRD3-202ENST00000371834 TTC38Q5R3I4 469 aa26.02■■□□□ 1.76
BRD3-202ENST00000371834 DDAH1O94760 285 aa26.01■■□□□ 1.75
BRD3-202ENST00000371834 CALM1P0DP23 149 aa26.01■■□□□ 1.75
BRD3-202ENST00000371834 CALM2P0DP24 149 aa26.01■■□□□ 1.75
BRD3-202ENST00000371834 CALM3P0DP25 149 aa26.01■■□□□ 1.75
BRD3-202ENST00000371834 PTGDRQ13258 359 aa26.01■■□□□ 1.75
BRD3-202ENST00000371834 BRMS1Q9HCU9 246 aa26.01■■□□□ 1.75
BRD3-202ENST00000371834 DCP1AQ9NPI6 582 aaPredicted RBP26.01■■□□□ 1.75
BRD3-202ENST00000371834 ZNF446Q9NWS9 450 aa26.01■■□□□ 1.75
BRD3-202ENST00000371834 PRDX5P30044 214 aa26■■□□□ 1.75
BRD3-202ENST00000371834 MYH13Q9UKX3 1938 aa26■■□□□ 1.75
BRD3-202ENST00000371834 STX10O60499 249 aa26■■□□□ 1.75
BRD3-202ENST00000371834 DPYDQ12882 1025 aa26■■□□□ 1.75
BRD3-202ENST00000371834 UTP14CQ5TAP6 766 aaKnown RBP26■■□□□ 1.75
BRD3-202ENST00000371834 APTXQ7Z2E3 356 aaKnown RBP26■■□□□ 1.75
BRD3-202ENST00000371834 SMARCC1Q92922 1105 aaPredicted RBP26■■□□□ 1.75
BRD3-202ENST00000371834 FERMT2Q96AC1 680 aa26■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms