RNA–Protein interactions for RNA: ENST00000369462.5

BRCC3-204, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,846 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-204ENST00000369462 TMTC2Q8N394 836 aa12.84□□□□□ -0.35
BRCC3-204ENST00000369462 CCDC69A6NI79 296 aa12.84□□□□□ -0.35
BRCC3-204ENST00000369462 RAB3GAP1Q15042 981 aa12.84□□□□□ -0.35
BRCC3-204ENST00000369462 SGMS1Q86VZ5 419 aa12.84□□□□□ -0.35
BRCC3-204ENST00000369462 DGKHQ86XP1 1220 aa12.84□□□□□ -0.35
BRCC3-204ENST00000369462 CABP5Q9NP86 173 aa12.84□□□□□ -0.35
BRCC3-204ENST00000369462 PHF20L1A8MW92 1017 aa12.84□□□□□ -0.35
BRCC3-204ENST00000369462 SEPT2Q15019 361 aa12.84□□□□□ -0.35
BRCC3-204ENST00000369462 CCDC178Q5BJE1 867 aa12.84□□□□□ -0.35
BRCC3-204ENST00000369462 RAB11FIP4Q86YS3 637 aa12.84□□□□□ -0.35
BRCC3-204ENST00000369462 NECAB1Q8N987 351 aa12.84□□□□□ -0.35
BRCC3-204ENST00000369462 SPRYD3Q8NCJ5 442 aa12.84□□□□□ -0.35
BRCC3-204ENST00000369462 ZSCAN31Q96LW9 406 aaPredicted RBP12.84□□□□□ -0.35
BRCC3-204ENST00000369462 MTMR4Q9NYA4 1195 aa12.84□□□□□ -0.35
BRCC3-204ENST00000369462 SLC12A7Q9Y666 1083 aa12.84□□□□□ -0.35
BRCC3-204ENST00000369462 MYH8P13535 1937 aa12.83□□□□□ -0.36
BRCC3-204ENST00000369462 PLIN4Q96Q06 1357 aa12.83□□□□□ -0.36
BRCC3-204ENST00000369462 PDIA3P30101 505 aaKnown RBP12.83□□□□□ -0.36
BRCC3-204ENST00000369462 CAP2P40123 477 aa12.83□□□□□ -0.36
BRCC3-204ENST00000369462 EVCP57679 992 aa12.83□□□□□ -0.36
BRCC3-204ENST00000369462 APOA5Q6Q788 366 aa12.83□□□□□ -0.36
BRCC3-204ENST00000369462 TMEM179Q6ZVK1 233 aa12.83□□□□□ -0.36
BRCC3-204ENST00000369462 LDHDQ86WU2 507 aa12.83□□□□□ -0.36
BRCC3-204ENST00000369462 CDCA5Q96FF9 252 aa12.83□□□□□ -0.36
BRCC3-204ENST00000369462 MYL10Q9BUA6 226 aa12.83□□□□□ -0.36
BRCC3-204ENST00000369462 ZNF341Q9BYN7 854 aa12.83□□□□□ -0.36
BRCC3-204ENST00000369462 IGKV6D-41A0A0C4DH26 115 aa12.83□□□□□ -0.36
BRCC3-204ENST00000369462 GOLGA8BA8MQT2 603 aa12.83□□□□□ -0.36
BRCC3-204ENST00000369462 RXRAP19793 462 aa12.83□□□□□ -0.36
BRCC3-204ENST00000369462 ATP2B2Q01814 1243 aa12.83□□□□□ -0.36
BRCC3-204ENST00000369462 ZNF274Q96GC6 653 aaPredicted RBP12.83□□□□□ -0.36
BRCC3-204ENST00000369462 SH2B1Q9NRF2 756 aaPredicted RBP12.83□□□□□ -0.36
BRCC3-204ENST00000369462 HSP90AA1P07900 732 aaKnown RBP12.82□□□□□ -0.36
BRCC3-204ENST00000369462 INPP5BP32019 993 aa12.82□□□□□ -0.36
BRCC3-204ENST00000369462 GUCY1A2P33402 732 aa12.82□□□□□ -0.36
BRCC3-204ENST00000369462 CCT2P78371 535 aaKnown RBP12.82□□□□□ -0.36
BRCC3-204ENST00000369462 SYNE3Q6ZMZ3 975 aa12.82□□□□□ -0.36
BRCC3-204ENST00000369462 MICU3Q86XE3 530 aa12.82□□□□□ -0.36
BRCC3-204ENST00000369462 WRNIP1Q96S55 665 aa12.82□□□□□ -0.36
BRCC3-204ENST00000369462 TMEM47Q9BQJ4 181 aa12.82□□□□□ -0.36
BRCC3-204ENST00000369462 SLKQ9H2G2 1235 aaPredicted RBP12.82□□□□□ -0.36
BRCC3-204ENST00000369462 KAT14Q9H8E8 782 aa12.82□□□□□ -0.36
BRCC3-204ENST00000369462 KANSL2Q9H9L4 492 aa12.82□□□□□ -0.36
BRCC3-204ENST00000369462 GPBP1L1Q9HC44 474 aaPredicted RBP12.82□□□□□ -0.36
BRCC3-204ENST00000369462 CLIP2Q9UDT6 1046 aa12.82□□□□□ -0.36
BRCC3-204ENST00000369462 SSC5DA1L4H1 1573 aa12.82□□□□□ -0.36
BRCC3-204ENST00000369462 TTLL1O95922 423 aa12.82□□□□□ -0.36
BRCC3-204ENST00000369462 ZNF654Q8IZM8 581 aa12.82□□□□□ -0.36
BRCC3-204ENST00000369462 ANKS1AQ92625 1134 aa12.82□□□□□ -0.36
BRCC3-204ENST00000369462 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.82□□□□□ -0.36
BRCC3-204ENST00000369462 ZBTB21Q9ULJ3 1066 aa12.82□□□□□ -0.36
BRCC3-204ENST00000369462 TRAF5O00463 557 aa12.81□□□□□ -0.36
BRCC3-204ENST00000369462 ZBTB43O43298 467 aa12.81□□□□□ -0.36
BRCC3-204ENST00000369462 PPP1R12BO60237 982 aaPredicted RBP12.81□□□□□ -0.36
BRCC3-204ENST00000369462 CTNND1O60716 968 aaKnown RBP12.81□□□□□ -0.36
BRCC3-204ENST00000369462 NF2P35240 595 aa12.81□□□□□ -0.36
BRCC3-204ENST00000369462 ICA1Q05084 483 aa12.81□□□□□ -0.36
BRCC3-204ENST00000369462 CATIPQ7Z7H3 387 aa12.81□□□□□ -0.36
BRCC3-204ENST00000369462 CCDC83Q8IWF9 413 aa12.81□□□□□ -0.36
BRCC3-204ENST00000369462 CCDC144CPQ8IYA2 1237 aa12.81□□□□□ -0.36
BRCC3-204ENST00000369462 PNMA1Q8ND90 353 aa12.81□□□□□ -0.36
BRCC3-204ENST00000369462 NUP133Q8WUM0 1156 aa12.81□□□□□ -0.36
BRCC3-204ENST00000369462 KLRG1Q96E93 195 aa12.81□□□□□ -0.36
BRCC3-204ENST00000369462 ASNSP08243 561 aa12.81□□□□□ -0.36
BRCC3-204ENST00000369462 EEF2P13639 858 aaKnown RBP12.81□□□□□ -0.36
BRCC3-204ENST00000369462 FMR1Q06787 632 aaKnown RBP eCLIP12.81□□□□□ -0.36
BRCC3-204ENST00000369462 ZKSCAN4Q969J2 545 aaPredicted RBP12.81□□□□□ -0.36
BRCC3-204ENST00000369462 CHMP4CQ96CF2 233 aa12.81□□□□□ -0.36
BRCC3-204ENST00000369462 NCOA5Q9HCD5 579 aaKnown RBP12.81□□□□□ -0.36
BRCC3-204ENST00000369462 ZNF112Q9UJU3 913 aa12.81□□□□□ -0.36
BRCC3-204ENST00000369462 HPS5Q9UPZ3 1129 aa12.81□□□□□ -0.36
BRCC3-204ENST00000369462 MTMR7Q9Y216 660 aa12.81□□□□□ -0.36
BRCC3-204ENST00000369462 PFKFB2O60825 505 aa12.8□□□□□ -0.36
BRCC3-204ENST00000369462 USP2O75604 605 aaPredicted RBP12.8□□□□□ -0.36
BRCC3-204ENST00000369462 TOP1P11387 765 aaKnown RBP12.8□□□□□ -0.36
BRCC3-204ENST00000369462 NOVP48745 357 aa12.8□□□□□ -0.36
BRCC3-204ENST00000369462 DTNBO60941 627 aa12.8□□□□□ -0.36
BRCC3-204ENST00000369462 METAP2P50579 478 aaKnown RBP eCLIP12.8□□□□□ -0.36
BRCC3-204ENST00000369462 SCRN1Q12765 414 aa12.8□□□□□ -0.36
BRCC3-204ENST00000369462 TROAPQ12815 778 aa12.8□□□□□ -0.36
BRCC3-204ENST00000369462 CCDC84Q86UT8 332 aaPredicted RBP12.8□□□□□ -0.36
BRCC3-204ENST00000369462 SIAH1Q8IUQ4 282 aa12.8□□□□□ -0.36
BRCC3-204ENST00000369462 LRRC47Q8N1G4 583 aaKnown RBP12.8□□□□□ -0.36
BRCC3-204ENST00000369462 GTF3C6Q969F1 213 aa12.8□□□□□ -0.36
BRCC3-204ENST00000369462 ZNF408Q9H9D4 720 aa12.8□□□□□ -0.36
BRCC3-204ENST00000369462 ST3GAL1Q11201 340 aa12.8□□□□□ -0.36
BRCC3-204ENST00000369462 CUL4AQ13619 759 aa12.8□□□□□ -0.36
BRCC3-204ENST00000369462 TTLL12Q14166 644 aaPredicted RBP12.8□□□□□ -0.36
BRCC3-204ENST00000369462 PPP4R3BQ5MIZ7 849 aa12.8□□□□□ -0.36
BRCC3-204ENST00000369462 NYAP2Q9P242 653 aa12.8□□□□□ -0.36
BRCC3-204ENST00000369462 GOLGA8AA7E2F4 631 aa12.79□□□□□ -0.36
BRCC3-204ENST00000369462 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.79□□□□□ -0.36
BRCC3-204ENST00000369462 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.79□□□□□ -0.36
BRCC3-204ENST00000369462 ADD1P35611 737 aaKnown RBP12.79□□□□□ -0.36
BRCC3-204ENST00000369462 MOB2Q70IA6 237 aa12.79□□□□□ -0.36
BRCC3-204ENST00000369462 FANCBQ8NB91 859 aa12.79□□□□□ -0.36
BRCC3-204ENST00000369462 RAD21O60216 631 aa12.78□□□□□ -0.36
BRCC3-204ENST00000369462 CHADLQ6NUI6 762 aa12.78□□□□□ -0.36
BRCC3-204ENST00000369462 SCYL3Q8IZE3 742 aa12.78□□□□□ -0.36
BRCC3-204ENST00000369462 MKL1Q969V6 931 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms